FFCP PHASE1:Hg19::chr12:14133348..14133359,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:14133348..14133359,-
|short_description=p1@GRIN2B
|description=CAGE_peak_1_at_GRIN2B_5end
|association_with_transcript=-295bp_to_ENST00000279593_5end
|En...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2904 | |EntrezGene=2904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4586 | |HGNC=4586 | ||
|TSSclassifier=strong | |||
|UniProt=Q13224 | |UniProt=Q13224 | ||
|association_with_transcript=-295bp_to_ENST00000279593_5end | |||
|cluster_id=chr12:14133348..14133359,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_GRIN2B_5end | |||
|id=chr12:14133348..14133359,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.37e-14;82!UBERON:0010122;1.04e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.20e-99!34;UBERON:0001869!1.76e-99!32;UBERON:0002780!6.18e-99!41;UBERON:0001890!6.18e-99!41;UBERON:0006240!6.18e-99!41;UBERON:0001049!1.11e-96!57;UBERON:0005068!1.11e-96!57;UBERON:0006241!1.11e-96!57;UBERON:0007135!1.11e-96!57;UBERON:0003080!1.94e-96!42;UBERON:0002791!6.09e-96!33;UBERON:0002020!6.79e-93!34;UBERON:0003528!6.79e-93!34;UBERON:0002616!2.23e-88!59;UBERON:0001017!1.13e-86!82;UBERON:0000955!1.95e-86!69;UBERON:0006238!1.95e-86!69;UBERON:0005743!2.80e-82!86;UBERON:0002619!4.61e-78!22;UBERON:0000956!1.35e-74!25;UBERON:0000203!1.35e-74!25;UBERON:0000073!1.02e-73!94;UBERON:0001016!1.02e-73!94;UBERON:0001950!1.41e-70!20;UBERON:0003075!4.69e-68!86;UBERON:0007284!4.69e-68!86;UBERON:0002346!1.22e-64!90;UBERON:0003056!2.71e-64!61;UBERON:0000033!1.84e-47!123;UBERON:0007023!2.30e-46!115;UBERON:0000153!7.69e-45!129;UBERON:0007811!7.69e-45!129;UBERON:0004121!3.45e-37!169;UBERON:0000924!4.10e-36!173;UBERON:0006601!4.10e-36!173;UBERON:0000025!1.87e-26!194;UBERON:0002420!3.78e-26!9;UBERON:0007245!3.78e-26!9;UBERON:0010009!3.78e-26!9;UBERON:0010011!3.78e-26!9;UBERON:0000454!3.78e-26!9;UBERON:0001871!2.87e-23!7;UBERON:0000200!1.67e-22!6;UBERON:0002021!3.93e-20!5;UBERON:0000349!4.42e-20!5;UBERON:0001872!8.54e-20!5;UBERON:0002308!1.69e-19!9;UBERON:0000125!1.69e-19!9;UBERON:0004111!2.03e-19!241;UBERON:0009663!5.25e-19!7;UBERON:0000477!6.79e-16!286;UBERON:0000369!1.41e-15!4;UBERON:0002435!1.41e-15!4;UBERON:0000204!1.41e-15!4;UBERON:0010082!1.41e-15!4;UBERON:0000064!4.94e-15!219;UBERON:0000483!6.95e-15!309;UBERON:0000119!1.20e-14!312;UBERON:0000475!9.35e-14!365;UBERON:0002771!4.92e-12!3;UBERON:0005383!7.18e-12!3;UBERON:0005382!7.18e-12!3;UBERON:0001876!4.82e-09!2;UBERON:0001954!4.82e-09!2;UBERON:0003022!4.82e-09!2;UBERON:0002421!4.82e-09!2;UBERON:0002600!4.82e-09!2;UBERON:0000062!8.97e-09!511;UBERON:0001870!1.13e-08!2;UBERON:0001897!1.48e-08!2;UBERON:0001873!1.79e-08!2;UBERON:0010122!1.79e-08!2;UBERON:0001875!2.00e-08!2;UBERON:0006514!2.00e-08!2;UBERON:0000481!2.47e-08!347;UBERON:0002360!4.54e-08!2;UBERON:0000094!4.54e-08!2;UBERON:0007645!4.54e-08!2;UBERON:0003076!6.28e-08!15;UBERON:0003057!6.28e-08!15;UBERON:0004733!3.92e-07!12;UBERON:0002028!3.92e-07!12;UBERON:0007277!3.92e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.65e-104;32!UBERON:0002619;5.99e-104;22!UBERON:0002791;1.73e-97;32!UBERON:0001893;9.55e-96;34!UBERON:0001950;3.95e-93;20!UBERON:0000956;1.93e-91;25!UBERON:0000203;1.93e-91;25!UBERON:0003528;8.15e-90;34!UBERON:0002020;8.15e-90;34!UBERON:0002780;1.59e-74;41!UBERON:0001890;1.59e-74;41!UBERON:0000073;1.23e-46;53!UBERON:0002616;1.23e-46;53!UBERON:0000955;4.33e-41;68!UBERON:0001017;6.13e-34;75!UBERON:0002420;4.61e-29;9!UBERON:0007245;4.61e-29;9!UBERON:0010009;4.61e-29;9!UBERON:0010011;4.61e-29;9!UBERON:0000454;4.61e-29;9!UBERON:0002021;8.55e-29;5!UBERON:0001871;2.43e-28;6!UBERON:0000349;2.52e-28;5!UBERON:0001872;3.16e-28;5!UBERON:0001016;7.59e-26;83!UBERON:0000200;1.07e-22;6!UBERON:0000369;5.69e-22;4!UBERON:0002435;5.69e-22;4!UBERON:0000204;5.69e-22;4!UBERON:0009663;2.82e-19;7!UBERON:0005383;1.33e-16;3!UBERON:0005382;1.33e-16;3!UBERON:0000125;5.84e-15;9!UBERON:0002308;5.84e-15;9!UBERON:0007023;4.87e-13;114!UBERON:0001954;2.16e-12;2!UBERON:0003022;2.16e-12;2!UBERON:0002421;2.16e-12;2!UBERON:0002600;2.16e-12;2!UBERON:0001876;2.49e-12;2!UBERON:0011216;2.83e-12;132!UBERON:0002771;1.04e-11;2!UBERON:0001873;1.04e-11;2!UBERON:0010314;1.30e-08;132!UBERON:0001870;2.01e-08;3!UBERON:0002022;3.17e-07;1!UBERON:0001882;4.25e-07;1!UBERON:0005403;4.25e-07;1!UBERON:0002581;5.85e-07;1!UBERON:0002902;5.85e-07;1!UBERON:0009899;5.85e-07;1!UBERON:0007190;5.85e-07;1!UBERON:0003112;8.98e-07;1!UBERON:0011158;8.98e-07;1!UBERON:0003128;8.98e-07;1!UBERON:0001703;8.98e-07;1!UBERON:0002241;8.98e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.77e-118,32;UBERON:0001893,2.10e-111,34;UBERON:0002791,1.33e-109,32;UBERON:0002780,2.01e-106,41;UBERON:0001890,2.01e-106,41;UBERON:0003080,2.01e-106,41;UBERON:0006240,2.01e-106,41;UBERON:0002619,5.42e-104,22;UBERON:0003528,4.86e-103,34;UBERON:0002020,4.86e-103,34;UBERON:0001950,4.28e-93,20;UBERON:0000956,1.76e-91,25;UBERON:0000203,1.76e-91,25;UBERON:0000073,2.49e-87,53;UBERON:0002616,2.49e-87,53;UBERON:0001049,1.96e-82,56;UBERON:0005068,1.96e-82,56;UBERON:0006241,1.96e-82,56;UBERON:0007135,1.96e-82,56;UBERON:0000955,3.54e-81,68;UBERON:0006238,3.54e-81,68;UBERON:0001017,7.16e-72,81;UBERON:0003056,2.76e-70,61;UBERON:0001016,2.95e-64,89;UBERON:0003075,8.21e-55,82;UBERON:0007284,8.21e-55,82;UBERON:0002346,5.02e-52,86;UBERON:0010371,4.14e-42,104;UBERON:0007023,5.30e-38,114;UBERON:0010314,1.78e-34,132;UBERON:0004121,4.19e-31,171;UBERON:0000924,4.19e-31,171;UBERON:0006601,4.19e-31,171;UBERON:0002420,3.42e-29,9;UBERON:0007245,3.42e-29,9;UBERON:0010009,3.42e-29,9;UBERON:0010011,3.42e-29,9;UBERON:0000454,3.42e-29,9;UBERON:0002021,1.11e-28,5;UBERON:0000349,1.31e-28,5;UBERON:0001871,1.96e-28,6;UBERON:0001872,3.44e-28,5;UBERON:0011216,7.25e-26,223;UBERON:0000200,8.71e-23,6;UBERON:0000369,5.10e-22,4;UBERON:0002435,5.10e-22,4;UBERON:0000204,5.10e-22,4;UBERON:0010082,5.10e-22,4;UBERON:0000025,3.26e-20,192;UBERON:0009663,2.71e-19,7;UBERON:0005383,1.33e-16,3;UBERON:0005382,1.33e-16,3;UBERON:0004111,5.41e-15,240;UBERON:0000125,5.67e-15,9;UBERON:0002308,5.67e-15,9;UBERON:0001876,1.77e-12,2;UBERON:0001954,1.77e-12,2;UBERON:0003022,1.77e-12,2;UBERON:0002421,1.77e-12,2;UBERON:0002600,1.77e-12,2;UBERON:0002771,1.01e-11,2;UBERON:0001873,1.19e-11,2;UBERON:0010122,1.19e-11,2;UBERON:0000483,1.80e-10,306;UBERON:0000119,2.60e-10,309;UBERON:0001870,1.86e-08,3;UBERON:0002022,3.57e-07,1;UBERON:0001882,3.78e-07,1;UBERON:0005403,3.78e-07,1;UBERON:0002581,5.37e-07,1;UBERON:0007190,5.69e-07,1;UBERON:0002902,6.38e-07,1;UBERON:0009899,6.38e-07,1;UBERON:0003112,7.57e-07,1;UBERON:0011158,7.57e-07,1;UBERON:0003128,7.57e-07,1;UBERON:0001703,7.57e-07,1;UBERON:0002241,7.57e-07,1;UBERON:0004761,7.57e-07,1;UBERON:0009617,7.57e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96488588659779,2.95405774462077,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,2.22643435588443,9.98068990005971,0,0,0,0,0,0,0,0,0,1.77148277162768,2.05013945663194,0,0.221158519862449,1.18219047581419,1.75508317723178,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.1713222286267,0,0,0,0,0,4.28501866282686,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,3.94989877723569,0,0,0,0,0,5.22446187259012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,2.8793914062495,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88142110733092,7.08482881627925,2.23487402680012,5.33302547025963,9.57872445642529,3.25039086581824,2.90656162137332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37687923091973,3.12431239445539,2.48024155801421,3.29762213008315,12.580420607419,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,3.7490480930824,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23534474470043,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96488588659779,2.95405774462077,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,2.22643435588443,9.98068990005971,0,0,0,0,0,0,0,0,0,1.77148277162768,2.05013945663194,0,0.221158519862449,1.18219047581419,1.75508317723178,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.1713222286267,0,0,0,0,0,4.28501866282686,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,3.94989877723569,0,0,0,0,0,5.22446187259012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,2.8793914062495,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.88142110733092,7.08482881627925,2.23487402680012,5.33302547025963,9.57872445642529,3.25039086581824,2.90656162137332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37687923091973,3.12431239445539,2.48024155801421,3.29762213008315,12.580420607419,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,3.7490480930824,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23534474470043,7.41796173578642,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@GRIN2B | |||
}} | }} |
Latest revision as of 12:51, 17 September 2015
Short description: | p1@GRIN2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIN2B_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -295bp_to_ENST00000279593_5end |
EntrezGene: | GRIN2B |
HGNC: | 4586 |
UniProt: | Q13224 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data