FFCP PHASE1:Hg19::chr1:153362968..153363033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6279 | |EntrezGene=6279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10498 | |HGNC=10498 | ||
|TSSclassifier=strong | |||
|UniProt=P05109 | |UniProt=P05109 | ||
|association_with_transcript=0bp_to_AB590167,BC005928,BT007378,CR407674,DQ893495,DQ896367_5end | |association_with_transcript=0bp_to_AB590167,BC005928,BT007378,CR407674,DQ893495,DQ896367_5end | ||
|cluster_id=chr1:153362968..153363033,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_2_at_S100A8_5end | |description=CAGE_peak_2_at_S100A8_5end | ||
|id=chr1:153362968..153363033,- | |id=chr1:153362968..153363033,- | ||
|ontology_enrichment_celltype=CL:0002057!8.80e-45!42;CL:0000766!2.22e-42!76;CL:0000860!1.26e-40!45;CL:0002194!2.32e-38!63;CL:0000576!2.32e-38!63;CL:0000040!2.32e-38!63;CL:0000559!2.32e-38!63;CL:0002009!1.39e-36!65;CL:0000839!1.35e-32!70;CL:0000557!7.24e-32!71;CL:0000763!1.25e-29!112;CL:0000049!1.25e-29!112;CL:0000738!3.82e-28!140;CL:0002087!6.05e-27!119;CL:0000037!3.45e-24!172;CL:0000566!3.45e-24!172;CL:0002032!1.82e-23!165;CL:0000837!1.82e-23!165;CL:0000988!4.31e-22!182;CL:0002031!9.20e-22!124;CL:0000094!4.14e-10!8;CL:0002393!3.14e-09!9;CL:0002397!3.14e-09!9;CL:0000081!3.70e-08!11;CL:0002076!2.03e-07!43 | |ontology_enrichment_celltype=CL:0002057!8.80e-45!42;CL:0000766!2.22e-42!76;CL:0000860!1.26e-40!45;CL:0002194!2.32e-38!63;CL:0000576!2.32e-38!63;CL:0000040!2.32e-38!63;CL:0000559!2.32e-38!63;CL:0002009!1.39e-36!65;CL:0000839!1.35e-32!70;CL:0000557!7.24e-32!71;CL:0000763!1.25e-29!112;CL:0000049!1.25e-29!112;CL:0000738!3.82e-28!140;CL:0002087!6.05e-27!119;CL:0000037!3.45e-24!172;CL:0000566!3.45e-24!172;CL:0002032!1.82e-23!165;CL:0000837!1.82e-23!165;CL:0000988!4.31e-22!182;CL:0002031!9.20e-22!124;CL:0000094!4.14e-10!8;CL:0002393!3.14e-09!9;CL:0002397!3.14e-09!9;CL:0000081!3.70e-08!11;CL:0002076!2.03e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-53;33!CL:0002057;2.15e-53;33!CL:0000473;3.83e-46;39!CL:0000234;3.83e-46;39!CL:0000576;4.90e-35;48!CL:0000766;4.92e-28;69!CL:0000094;2.28e-15;8!CL:0000763;4.59e-13;100!CL:0002393;3.75e-11;6!CL:0002397;3.75e-11;6!CL:0000081;1.06e-10;11!CL:0002087;1.13e-08;104!CL:0000738;1.01e-07;136!CL:0000775;1.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.91e-68,48;CL:0000234,1.91e-68,48;CL:0000860,3.90e-66,42;CL:0002057,3.90e-66,42;CL:0000766,7.64e-60,72;CL:0002194,7.16e-52,59;CL:0000576,7.16e-52,59;CL:0000040,7.16e-52,59;CL:0000559,7.16e-52,59;CL:0002009,9.74e-50,61;CL:0000839,5.76e-45,66;CL:0000557,4.26e-44,67;CL:0000763,3.24e-36,108;CL:0000049,3.24e-36,108;CL:0000738,1.41e-30,136;CL:0002087,2.65e-26,115;CL:0000037,1.21e-22,168;CL:0002032,4.17e-21,161;CL:0000837,4.17e-21,161;CL:0002031,5.70e-21,120;CL:0000988,1.15e-20,177;CL:0000094,2.18e-15,8;CL:0000081,1.03e-10,11;CL:0002393,2.37e-09,9;CL:0002397,2.37e-09,9;CL:0000775,1.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-47;42!CL:0000049;8.34e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.64e-36!102;UBERON:0003061!2.64e-36!102;UBERON:0002193!1.53e-33!112;UBERON:0002371!3.64e-26!80;UBERON:0001474!4.63e-23!86;UBERON:0002405!9.10e-19!115;UBERON:0004765!5.83e-18!101;UBERON:0001434!5.83e-18!101;UBERON:0000178!4.59e-12!15;UBERON:0000179!4.59e-12!15;UBERON:0000463!4.59e-12!15;UBERON:0003081!1.94e-09!216;UBERON:0007023!2.30e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.24e-17;15!UBERON:0000179;5.24e-17;15!UBERON:0000463;5.24e-17;15!UBERON:0002390;4.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-49,98;UBERON:0003061,1.23e-49,98;UBERON:0002193,3.29e-47,108;UBERON:0002371,2.65e-37,76;UBERON:0001474,1.32e-33,82;UBERON:0002405,7.65e-33,93;UBERON:0004765,5.80e-31,90;UBERON:0001434,1.56e-26,100;UBERON:0003081,6.61e-18,203;UBERON:0000178,6.86e-17,15;UBERON:0000179,6.86e-17,15;UBERON:0000463,6.86e-17,15;UBERON:0002204,6.93e-11,167;UBERON:0000926,1.50e-07,315;UBERON:0004120,1.50e-07,315;UBERON:0006603,1.50e-07,315 | |||
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| ||
|short_description=p2@S100A8 | |short_description=p2@S100A8 | ||
}} | }} |
Latest revision as of 05:18, 17 September 2015
Short description: | p2@S100A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_S100A8_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 0bp_to_AB590167, BC005928, BT007378, CR407674, DQ893495, DQ896367_5end |
EntrezGene: | S100A8 |
HGNC: | 10498 |
UniProt: | P05109 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.91e-68 | 48 |
phagocyte | 1.91e-68 | 48 |
classical monocyte | 3.90e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.90e-66 | 42 |
myeloid leukocyte | 7.64e-60 | 72 |
monopoietic cell | 7.16e-52 | 59 |
monocyte | 7.16e-52 | 59 |
monoblast | 7.16e-52 | 59 |
promonocyte | 7.16e-52 | 59 |
macrophage dendritic cell progenitor | 9.74e-50 | 61 |
myeloid lineage restricted progenitor cell | 5.76e-45 | 66 |
granulocyte monocyte progenitor cell | 4.26e-44 | 67 |
myeloid cell | 3.24e-36 | 108 |
common myeloid progenitor | 3.24e-36 | 108 |
leukocyte | 1.41e-30 | 136 |
nongranular leukocyte | 2.65e-26 | 115 |
hematopoietic stem cell | 1.21e-22 | 168 |
hematopoietic oligopotent progenitor cell | 4.17e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.17e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 5.70e-21 | 120 |
hematopoietic cell | 1.15e-20 | 177 |
granulocyte | 2.18e-15 | 8 |
blood cell | 1.03e-10 | 11 |
intermediate monocyte | 2.37e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.37e-09 | 9 |
neutrophil | 1.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-49 | 98 |
blood island | 1.23e-49 | 98 |
hemolymphoid system | 3.29e-47 | 108 |
bone marrow | 2.65e-37 | 76 |
bone element | 1.32e-33 | 82 |
immune system | 7.65e-33 | 93 |
skeletal element | 5.80e-31 | 90 |
skeletal system | 1.56e-26 | 100 |
lateral plate mesoderm | 6.61e-18 | 203 |
blood | 6.86e-17 | 15 |
haemolymphatic fluid | 6.86e-17 | 15 |
organism substance | 6.86e-17 | 15 |
musculoskeletal system | 6.93e-11 | 167 |
mesoderm | 1.50e-07 | 315 |
mesoderm-derived structure | 1.50e-07 | 315 |
presumptive mesoderm | 1.50e-07 | 315 |