FFCP PHASE1:Hg19::chr1:186643827..186643840,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186643827..186643840,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_at_chr1:186643827..186643840,- | |description=CAGE_peak_at_chr1:186643827..186643840,- | ||
|id=chr1:186643827..186643840,- | |id=chr1:186643827..186643840,- | ||
|ontology_enrichment_celltype=CL:0000860!7.47e-19!45;CL:0002057!5.22e-18!42;CL:0000766!1.08e-15!76;CL:0000557!1.58e-13!71;CL:0000839!1.05e-12!70;CL:0002009!2.26e-12!65;CL:0002194!7.23e-12!63;CL:0000576!7.23e-12!63;CL:0000040!7.23e-12!63;CL:0000559!7.23e-12!63;CL:0000763!7.75e-09!112;CL:0000049!7.75e-09!112;CL:0000738!8.70e-07!140 | |ontology_enrichment_celltype=CL:0000860!7.47e-19!45;CL:0002057!5.22e-18!42;CL:0000766!1.08e-15!76;CL:0000557!1.58e-13!71;CL:0000839!1.05e-12!70;CL:0002009!2.26e-12!65;CL:0002194!7.23e-12!63;CL:0000576!7.23e-12!63;CL:0000040!7.23e-12!63;CL:0000559!7.23e-12!63;CL:0000763!7.75e-09!112;CL:0000049!7.75e-09!112;CL:0000738!8.70e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.03e-31;33!CL:0002057;3.03e-31;33!CL:0000473;1.04e-22;39!CL:0000234;1.04e-22;39!CL:0000775;2.10e-22;3!CL:0000766;2.87e-18;69!CL:0000576;4.32e-17;48!CL:0000094;6.41e-15;8!CL:0000081;6.80e-11;11!CL:0000763;6.05e-09;100!CL:0002087;5.69e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.37e-36,72;CL:0000860,1.62e-35,42;CL:0002057,1.62e-35,42;CL:0000473,1.00e-30,48;CL:0000234,1.00e-30,48;CL:0000839,2.14e-24,66;CL:0002194,5.17e-24,59;CL:0000576,5.17e-24,59;CL:0000040,5.17e-24,59;CL:0000559,5.17e-24,59;CL:0000557,5.41e-24,67;CL:0002009,3.80e-23,61;CL:0000763,9.61e-23,108;CL:0000049,9.61e-23,108;CL:0000775,1.69e-22,3;CL:0000738,2.54e-17,136;CL:0000094,5.87e-15,8;CL:0002032,4.64e-14,161;CL:0000837,4.64e-14,161;CL:0000037,2.56e-13,168;CL:0000988,1.88e-12,177;CL:0002031,3.88e-12,120;CL:0002087,4.85e-11,115;CL:0000081,6.39e-11,11;CL:0000134,3.03e-08,354;CL:0002320,5.37e-08,361;CL:0000219,4.04e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.18e-24;42!UBERON:0005754;7.55e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.94e-12!80;UBERON:0001474!2.37e-11!86;UBERON:0002193!7.37e-10!112;UBERON:0004765!1.19e-09!101;UBERON:0001434!1.19e-09!101;UBERON:0002390!1.63e-09!102;UBERON:0003061!1.63e-09!102;UBERON:0002405!1.12e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!5.94e-12!80;UBERON:0001474!2.37e-11!86;UBERON:0002193!7.37e-10!112;UBERON:0004765!1.19e-09!101;UBERON:0001434!1.19e-09!101;UBERON:0002390!1.63e-09!102;UBERON:0003061!1.63e-09!102;UBERON:0002405!1.12e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.31e-10;3!UBERON:0004054;1.31e-10;3!UBERON:0000998;7.55e-09;1!UBERON:0006868;7.55e-09;1!UBERON:0001000;2.55e-08;1!UBERON:0005352;2.55e-08;1!UBERON:0005904;3.60e-08;4!UBERON:0002119;6.47e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.86e-21,76;UBERON:0001474,4.20e-19,82;UBERON:0004765,3.74e-17,90;UBERON:0002405,1.65e-16,93;UBERON:0002390,1.61e-15,98;UBERON:0003061,1.61e-15,98;UBERON:0001434,3.77e-15,100;UBERON:0002193,8.20e-14,108;UBERON:0006947,9.56e-11,3;UBERON:0004054,9.56e-11,3;UBERON:0003081,4.31e-09,203;UBERON:0000998,7.56e-09,1;UBERON:0006868,7.56e-09,1;UBERON:0001000,1.59e-08,1;UBERON:0005352,1.59e-08,1;UBERON:0005904,2.85e-08,4;UBERON:0002119,6.47e-08,4;UBERON:0002204,6.89e-08,167;UBERON:0002384,1.17e-07,371;UBERON:0000926,6.76e-07,315;UBERON:0004120,6.76e-07,315;UBERON:0006603,6.76e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,2.00544447470142,0.868043482863407,0,0,0,0,0,0,0,0,1.23882548358041,1.1507695692886,0.256160706529101,0.236482229888585,4.13694816883942,3.22742341791913,5.41705946377367,0.188242339542605,0,0,7.65209730927256,1.92557416245656,5.75403413219137,0,0,0,7.54544020434318,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,1.47311054395026,4.1140110367315,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.804231779293047,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,9.36060152002293,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,2.99602809578873,11.966458368161,1.24324654030811,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0.519254429183621,0.116210378459959,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0.918893600827838,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0.457680136793847,0,0.621748802331122,2.21782724984451,1.11507737014592,1.34940933649081,0.310525913752519,0,0,0,0.300515217994437,0,0,0.727394636810238,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,7.62096690343672,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,2.00544447470142,0.868043482863407,0,0,0,0,0,0,0,0,1.23882548358041,1.1507695692886,0.256160706529101,0.236482229888585,4.13694816883942,3.22742341791913,5.41705946377367,0.188242339542605,0,0,7.65209730927256,1.92557416245656,5.75403413219137,0,0,0,7.54544020434318,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,1.47311054395026,4.1140110367315,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.804231779293047,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,9.36060152002293,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,2.99602809578873,11.966458368161,1.24324654030811,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0.519254429183621,0.116210378459959,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0.918893600827838,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,1.05562704063997,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0.457680136793847,0,0.621748802331122,2.21782724984451,1.11507737014592,1.34940933649081,0.310525913752519,0,0,0,0.300515217994437,0,0,0.727394636810238,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0.0634158101939068,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,7.62096690343672,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:186643827..186643840,- | |short_description=p@chr1:186643827..186643840,- | ||
}} | }} |
Latest revision as of 01:32, 28 July 2015
Short description: | p@chr1:186643827..186643840, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186643827..186643840, - |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.37e-36 | 72 |
classical monocyte | 1.62e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-35 | 42 |
defensive cell | 1.00e-30 | 48 |
phagocyte | 1.00e-30 | 48 |
myeloid lineage restricted progenitor cell | 2.14e-24 | 66 |
monopoietic cell | 5.17e-24 | 59 |
monocyte | 5.17e-24 | 59 |
monoblast | 5.17e-24 | 59 |
promonocyte | 5.17e-24 | 59 |
granulocyte monocyte progenitor cell | 5.41e-24 | 67 |
macrophage dendritic cell progenitor | 3.80e-23 | 61 |
myeloid cell | 9.61e-23 | 108 |
common myeloid progenitor | 9.61e-23 | 108 |
neutrophil | 1.69e-22 | 3 |
leukocyte | 2.54e-17 | 136 |
granulocyte | 5.87e-15 | 8 |
hematopoietic oligopotent progenitor cell | 4.64e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.64e-14 | 161 |
hematopoietic stem cell | 2.56e-13 | 168 |
hematopoietic cell | 1.88e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 3.88e-12 | 120 |
nongranular leukocyte | 4.85e-11 | 115 |
blood cell | 6.39e-11 | 11 |
mesenchymal cell | 3.03e-08 | 354 |
connective tissue cell | 5.37e-08 | 361 |
motile cell | 4.04e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.86e-21 | 76 |
bone element | 4.20e-19 | 82 |
skeletal element | 3.74e-17 | 90 |
immune system | 1.65e-16 | 93 |
hematopoietic system | 1.61e-15 | 98 |
blood island | 1.61e-15 | 98 |
skeletal system | 3.77e-15 | 100 |
hemolymphoid system | 8.20e-14 | 108 |
male genital duct | 9.56e-11 | 3 |
internal male genitalia | 9.56e-11 | 3 |
lateral plate mesoderm | 4.31e-09 | 203 |
seminal vesicle | 7.56e-09 | 1 |
seminal fluid secreting gland | 7.56e-09 | 1 |
vas deferens | 1.59e-08 | 1 |
spermatic cord | 1.59e-08 | 1 |
duct of male reproductive system | 2.85e-08 | 4 |
left ovary | 6.47e-08 | 4 |
musculoskeletal system | 6.89e-08 | 167 |
connective tissue | 1.17e-07 | 371 |
mesoderm | 6.76e-07 | 315 |
mesoderm-derived structure | 6.76e-07 | 315 |
presumptive mesoderm | 6.76e-07 | 315 |