FFCP PHASE1:Hg19::chr1:89735274..89735282,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115362 | |EntrezGene=115362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19895 | |HGNC=19895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_DQ895650,EU176216_5end | |association_with_transcript=-35bp_to_DQ895650,EU176216_5end | ||
|cluster_id=chr1:89735274..89735282,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_GBP5_5end | |description=CAGE_peak_4_at_GBP5_5end | ||
|id=chr1:89735274..89735282,- | |id=chr1:89735274..89735282,- | ||
|ontology_enrichment_celltype=CL:0002087!2.61e-32!119;CL:0000738!1.19e-31!140;CL:0002057!1.21e-27!42;CL:0000037!7.00e-27!172;CL:0000566!7.00e-27!172;CL:0002031!6.10e-26!124;CL:0000860!2.50e-25!45;CL:0002032!1.08e-24!165;CL:0000837!1.08e-24!165;CL:0000988!1.28e-24!182;CL:0000766!2.10e-20!76;CL:0000791!5.33e-20!18;CL:0000789!5.33e-20!18;CL:0002420!5.33e-20!18;CL:0002419!5.33e-20!18;CL:0000790!5.33e-20!18;CL:0002194!9.90e-19!63;CL:0000576!9.90e-19!63;CL:0000040!9.90e-19!63;CL:0000559!9.90e-19!63;CL:0002009!6.10e-18!65;CL:0000839!3.62e-16!70;CL:0000557!7.64e-16!71;CL:0000084!1.04e-15!25;CL:0000827!1.04e-15!25;CL:0000624!7.48e-15!6;CL:0000763!2.52e-14!112;CL:0000049!2.52e-14!112;CL:0000838!1.69e-10!52;CL:0000542!3.24e-10!53;CL:0000051!3.24e-10!53;CL:0000623!1.26e-08!3;CL:0000825!1.26e-08!3;CL:0000775!1.74e-08!3;CL:0000898!2.78e-08!3;CL:0000842!1.55e-07!3;CL:0000875!1.73e-07!3;CL:0002396!1.73e-07!3;CL:0000625!2.72e-07!11 | |ontology_enrichment_celltype=CL:0002087!2.61e-32!119;CL:0000738!1.19e-31!140;CL:0002057!1.21e-27!42;CL:0000037!7.00e-27!172;CL:0000566!7.00e-27!172;CL:0002031!6.10e-26!124;CL:0000860!2.50e-25!45;CL:0002032!1.08e-24!165;CL:0000837!1.08e-24!165;CL:0000988!1.28e-24!182;CL:0000766!2.10e-20!76;CL:0000791!5.33e-20!18;CL:0000789!5.33e-20!18;CL:0002420!5.33e-20!18;CL:0002419!5.33e-20!18;CL:0000790!5.33e-20!18;CL:0002194!9.90e-19!63;CL:0000576!9.90e-19!63;CL:0000040!9.90e-19!63;CL:0000559!9.90e-19!63;CL:0002009!6.10e-18!65;CL:0000839!3.62e-16!70;CL:0000557!7.64e-16!71;CL:0000084!1.04e-15!25;CL:0000827!1.04e-15!25;CL:0000624!7.48e-15!6;CL:0000763!2.52e-14!112;CL:0000049!2.52e-14!112;CL:0000838!1.69e-10!52;CL:0000542!3.24e-10!53;CL:0000051!3.24e-10!53;CL:0000623!1.26e-08!3;CL:0000825!1.26e-08!3;CL:0000775!1.74e-08!3;CL:0000898!2.78e-08!3;CL:0000842!1.55e-07!3;CL:0000875!1.73e-07!3;CL:0002396!1.73e-07!3;CL:0000625!2.72e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.04e-27;33!CL:0002057;6.04e-27;33!CL:0000623;1.14e-21;3!CL:0000473;3.87e-20;39!CL:0000234;3.87e-20;39!CL:0000576;3.11e-14;48!CL:0000624;3.59e-11;6!CL:0000775;1.16e-10;3!CL:0000791;1.35e-09;18!CL:0000789;1.35e-09;18!CL:0002419;1.35e-09;18!CL:0002087;1.77e-08;104!CL:0000766;6.76e-07;69!CL:0000084;7.45e-07;25!CL:0000763;8.04e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.22e-23,42;CL:0002057,4.22e-23,42;CL:0000623,1.10e-21,3;CL:0000825,1.10e-21,3;CL:0000738,1.71e-21,136;CL:0002087,4.12e-21,115;CL:0002031,4.40e-20,120;CL:0000473,6.15e-20,48;CL:0000234,6.15e-20,48;CL:0002032,1.51e-17,161;CL:0000837,1.51e-17,161;CL:0000766,4.32e-17,72;CL:0000037,1.19e-16,168;CL:0000988,1.33e-15,177;CL:0002194,1.65e-15,59;CL:0000576,1.65e-15,59;CL:0000040,1.65e-15,59;CL:0000559,1.65e-15,59;CL:0002009,6.17e-15,61;CL:0000839,1.18e-13,66;CL:0000557,2.01e-13,67;CL:0000624,4.20e-11,6;CL:0000775,1.05e-10,3;CL:0000763,1.46e-10,108;CL:0000049,1.46e-10,108;CL:0000791,1.49e-09,18;CL:0000789,1.49e-09,18;CL:0002420,1.49e-09,18;CL:0002419,1.49e-09,18;CL:0000790,1.49e-09,18;CL:0000838,1.62e-07,52;CL:0000542,2.35e-07,53;CL:0000051,2.35e-07,53;CL:0000084,8.00e-07,25;CL:0000827,8.00e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-18;42!CL:0000790;1.35e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.08e-22!102;UBERON:0003061!5.08e-22!102;UBERON:0002193!3.67e-19!112;UBERON:0002371!2.68e-13!80;UBERON:0001474!6.63e-12!86;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15;UBERON:0004765!3.54e-09!101;UBERON:0001434!3.54e-09!101;UBERON:0002405!6.77e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-11,76;UBERON:0001474,1.34e-10,82;UBERON:0004765,1.79e-09,90;UBERON:0002405,4.22e-09,93;UBERON:0002390,1.57e-08,98;UBERON:0003061,1.57e-08,98;UBERON:0001434,2.55e-08,100;UBERON:0002193,1.50e-07,108 | |||
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| ||
|short_description=p4@GBP5 | |short_description=p4@GBP5 | ||
}} | }} |
Latest revision as of 16:58, 19 September 2015
Short description: | p4@GBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GBP5_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -35bp_to_DQ895650, EU176216_5end |
EntrezGene: | GBP5 |
HGNC: | 19895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-11 | 76 |
bone element | 1.34e-10 | 82 |
skeletal element | 1.79e-09 | 90 |
immune system | 4.22e-09 | 93 |
hematopoietic system | 1.57e-08 | 98 |
blood island | 1.57e-08 | 98 |
skeletal system | 2.55e-08 | 100 |
hemolymphoid system | 1.50e-07 | 108 |