FFCP PHASE1:Hg19::chr6:133119727..133119814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116843 | |EntrezGene=116843 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21573 | |HGNC=21573 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBJ2,Q6NT16 | |UniProt=Q5TBJ2,Q6NT16 | ||
|association_with_transcript=0bp_to_ENST00000367919,NM_052831,uc003qdw.1,uc011eco.1_5end | |association_with_transcript=0bp_to_ENST00000367919,NM_052831,uc003qdw.1,uc011eco.1_5end | ||
|cluster_id=chr6:133119727..133119814,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_C6orf192_5end | |description=CAGE_peak_1_at_C6orf192_5end | ||
|id=chr6:133119727..133119814,- | |id=chr6:133119727..133119814,- | ||
|ontology_enrichment_celltype=CL:0000791!9.72e-07!18;CL:0000789!9.72e-07!18;CL:0002420!9.72e-07!18;CL:0002419!9.72e-07!18;CL:0000790!9.72e-07!18 | |ontology_enrichment_celltype=CL:0000791!9.72e-07!18;CL:0000789!9.72e-07!18;CL:0002420!9.72e-07!18;CL:0002419!9.72e-07!18;CL:0000790!9.72e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.42e-07,18;CL:0000789,9.42e-07,18;CL:0002420,9.42e-07,18;CL:0002419,9.42e-07,18;CL:0000790,9.42e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-22!115;UBERON:0001049!4.62e-18!57;UBERON:0005068!4.62e-18!57;UBERON:0006241!4.62e-18!57;UBERON:0007135!4.62e-18!57;UBERON:0002616!5.34e-15!59;UBERON:0001017!3.58e-14!82;UBERON:0003080!3.98e-14!42;UBERON:0002780!8.64e-14!41;UBERON:0001890!8.64e-14!41;UBERON:0006240!8.64e-14!41;UBERON:0005743!2.23e-13!86;UBERON:0001893!7.83e-13!34;UBERON:0002020!1.06e-12!34;UBERON:0003528!1.06e-12!34;UBERON:0002791!2.60e-12!33;UBERON:0000955!5.24e-12!69;UBERON:0006238!5.24e-12!69;UBERON:0001869!5.26e-12!32;UBERON:0000073!1.15e-11!94;UBERON:0001016!1.15e-11!94;UBERON:0000956!5.25e-10!25;UBERON:0000203!5.25e-10!25;UBERON:0002619!9.35e-10!22;UBERON:0000153!9.84e-10!129;UBERON:0007811!9.84e-10!129;UBERON:0002346!3.05e-09!90;UBERON:0001950!9.48e-09!20;UBERON:0003075!1.00e-08!86;UBERON:0007284!1.00e-08!86;UBERON:0000033!1.37e-08!123;UBERON:0003056!6.59e-08!61;UBERON:0000924!4.30e-07!173;UBERON:0006601!4.30e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.84e-11;34!UBERON:0002020;8.84e-11;34!UBERON:0001869;8.90e-11;32!UBERON:0001893;9.08e-11;34!UBERON:0002791;9.99e-11;32!UBERON:0002780;2.05e-10;41!UBERON:0001890;2.05e-10;41!UBERON:0000073;3.57e-10;53!UBERON:0002616;3.57e-10;53!UBERON:0000956;4.44e-10;25!UBERON:0000203;4.44e-10;25!UBERON:0002619;8.80e-10;22!UBERON:0001950;8.99e-09;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.58e-22,114;UBERON:0001049,9.27e-18,56;UBERON:0005068,9.27e-18,56;UBERON:0006241,9.27e-18,56;UBERON:0007135,9.27e-18,56;UBERON:0000073,3.38e-16,53;UBERON:0002616,3.38e-16,53;UBERON:0002780,8.02e-14,41;UBERON:0001890,8.02e-14,41;UBERON:0003080,8.02e-14,41;UBERON:0006240,8.02e-14,41;UBERON:0001017,8.94e-14,81;UBERON:0001893,7.31e-13,34;UBERON:0003528,9.87e-13,34;UBERON:0002020,9.87e-13,34;UBERON:0011216,1.09e-12,223;UBERON:0001016,4.84e-12,89;UBERON:0001869,4.94e-12,32;UBERON:0002791,7.63e-12,32;UBERON:0000955,1.30e-11,68;UBERON:0006238,1.30e-11,68;UBERON:0000956,4.99e-10,25;UBERON:0000203,4.99e-10,25;UBERON:0002619,8.90e-10,22;UBERON:0002346,9.35e-10,86;UBERON:0003075,3.12e-09,82;UBERON:0007284,3.12e-09,82;UBERON:0001950,9.07e-09,20;UBERON:0010371,1.76e-08,104;UBERON:0004121,1.51e-07,171;UBERON:0000924,1.51e-07,171;UBERON:0006601,1.51e-07,171;UBERON:0003056,1.63e-07,61 | |||
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| ||
|short_description=p1@C6orf192 | |short_description=p1@C6orf192 | ||
}} | }} |
Latest revision as of 20:26, 24 September 2015
Short description: | p1@C6orf192 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf192_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000367919, NM_052831, uc003qdw.1, uc011eco.1_5end |
EntrezGene: | C6orf192 |
HGNC: | 21573 |
UniProt: | Q5TBJ2Q6NT16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.42e-07 | 18 |
alpha-beta T cell | 9.42e-07 | 18 |
immature T cell | 9.42e-07 | 18 |
mature T cell | 9.42e-07 | 18 |
immature alpha-beta T cell | 9.42e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.58e-22 | 114 |
neural tube | 9.27e-18 | 56 |
neural rod | 9.27e-18 | 56 |
future spinal cord | 9.27e-18 | 56 |
neural keel | 9.27e-18 | 56 |
regional part of nervous system | 3.38e-16 | 53 |
regional part of brain | 3.38e-16 | 53 |
regional part of forebrain | 8.02e-14 | 41 |
forebrain | 8.02e-14 | 41 |
anterior neural tube | 8.02e-14 | 41 |
future forebrain | 8.02e-14 | 41 |
central nervous system | 8.94e-14 | 81 |
telencephalon | 7.31e-13 | 34 |
brain grey matter | 9.87e-13 | 34 |
gray matter | 9.87e-13 | 34 |
organ system subdivision | 1.09e-12 | 223 |
nervous system | 4.84e-12 | 89 |
cerebral hemisphere | 4.94e-12 | 32 |
regional part of telencephalon | 7.63e-12 | 32 |
brain | 1.30e-11 | 68 |
future brain | 1.30e-11 | 68 |
cerebral cortex | 4.99e-10 | 25 |
pallium | 4.99e-10 | 25 |
regional part of cerebral cortex | 8.90e-10 | 22 |
neurectoderm | 9.35e-10 | 86 |
neural plate | 3.12e-09 | 82 |
presumptive neural plate | 3.12e-09 | 82 |
neocortex | 9.07e-09 | 20 |
ecto-epithelium | 1.76e-08 | 104 |
ectoderm-derived structure | 1.51e-07 | 171 |
ectoderm | 1.51e-07 | 171 |
presumptive ectoderm | 1.51e-07 | 171 |
pre-chordal neural plate | 1.63e-07 | 61 |