FFCP PHASE1:Hg19::chr13:108922228..108922246,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:108922228..108922246,+
|short_description=p3@TNFSF13B
|description=CAGE_peak_3_at_TNFSF13B_5end
|association_with_transcript=0bp_to_ENST00000542136_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10673 | |EntrezGene=10673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |HGNC=11929 | ||
|TSSclassifier=strong | |||
|UniProt=E0ADT7 | |UniProt=E0ADT7 | ||
|association_with_transcript=0bp_to_ENST00000542136_5end | |||
|cluster_id=chr13:108922228..108922246,+ | |||
|coexpression_cluster_id=C1186 | |||
|description=CAGE_peak_3_at_TNFSF13B_5end | |||
|id=chr13:108922228..108922246,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.32e-39!112;CL:0000049!5.32e-39!112;CL:0000037!3.23e-33!172;CL:0000566!3.23e-33!172;CL:0000766!4.66e-33!76;CL:0002057!4.11e-32!42;CL:0002032!8.91e-32!165;CL:0000837!8.91e-32!165;CL:0002194!1.23e-30!63;CL:0000576!1.23e-30!63;CL:0000040!1.23e-30!63;CL:0000559!1.23e-30!63;CL:0000988!2.09e-30!182;CL:0002009!8.04e-29!65;CL:0000860!2.19e-28!45;CL:0000839!2.05e-26!70;CL:0000557!3.08e-26!71;CL:0000738!1.32e-23!140;CL:0002087!8.11e-23!119;CL:0002031!8.04e-19!124;CL:0002320!2.69e-11!365;CL:0000134!1.05e-10!358;CL:0000094!1.84e-07!8;CL:0000048!3.18e-07!430;CL:0000219!3.33e-07!390;CL:0002393!6.71e-07!9;CL:0002397!6.71e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.34e-42;33!CL:0002057;6.34e-42;33!CL:0000473;4.46e-38;39!CL:0000234;4.46e-38;39!CL:0000576;3.36e-35;48!CL:0000766;3.97e-27;69!CL:0000763;3.33e-22;100!CL:0000094;4.84e-12;8!CL:0002087;1.85e-09;104!CL:0000738;1.88e-08;136!CL:0002393;3.13e-08;6!CL:0002397;3.13e-08;6!CL:0000081;3.43e-08;11!CL:0000988;5.41e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,6.94e-69,108;CL:0000049,6.94e-69,108;CL:0000766,9.30e-66,72;CL:0002194,4.47e-61,59;CL:0000576,4.47e-61,59;CL:0000040,4.47e-61,59;CL:0000559,4.47e-61,59;CL:0000473,5.19e-60,48;CL:0000234,5.19e-60,48;CL:0002009,1.89e-58,61;CL:0000860,5.72e-56,42;CL:0002057,5.72e-56,42;CL:0000557,9.45e-54,67;CL:0000839,1.39e-52,66;CL:0000037,4.99e-43,168;CL:0002032,5.76e-42,161;CL:0000837,5.76e-42,161;CL:0000988,2.04e-39,177;CL:0000738,1.71e-32,136;CL:0002087,3.60e-30,115;CL:0002031,1.64e-24,120;CL:0000134,4.49e-14,354;CL:0002320,2.81e-13,361;CL:0000094,4.89e-12,8;CL:0002393,4.82e-11,9;CL:0002397,4.82e-11,9;CL:0000219,1.58e-10,386;CL:0000034,6.68e-10,441;CL:0000048,9.64e-10,427;CL:0000723,3.05e-09,433;CL:0000081,3.45e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.78e-40;42!CL:0000049;3.33e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!2.56e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.79e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.68e-10,31;DOID:1240,7.12e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.76e-30!102;UBERON:0003061!3.76e-30!102;UBERON:0002193!6.76e-26!112;UBERON:0002371!7.90e-25!80;UBERON:0001474!4.32e-21!86;UBERON:0004765!6.49e-18!101;UBERON:0001434!6.49e-18!101;UBERON:0002405!1.11e-14!115;UBERON:0007023!1.29e-12!115;UBERON:0002204!7.25e-12!167;UBERON:0002384!3.41e-11!375;UBERON:0003081!4.49e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.92e-12;15!UBERON:0000179;5.92e-12;15!UBERON:0000463;5.92e-12;15!UBERON:0002390;5.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.55e-56,98;UBERON:0003061,4.55e-56,98;UBERON:0002193,2.81e-50,108;UBERON:0002371,1.60e-48,76;UBERON:0001474,1.58e-43,82;UBERON:0002405,4.88e-39,93;UBERON:0004765,6.46e-38,90;UBERON:0001434,7.86e-35,100;UBERON:0003081,3.38e-22,203;UBERON:0002204,3.12e-19,167;UBERON:0002384,1.06e-13,371;UBERON:0000178,6.28e-12,15;UBERON:0000179,6.28e-12,15;UBERON:0000463,6.28e-12,15;UBERON:0000926,6.98e-12,315;UBERON:0004120,6.98e-12,315;UBERON:0006603,6.98e-12,315 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0.458480434487708,0.492603536699674,0.236132343941038,3.54027849164014,4.98978217526377,5.72819656269481,0,0,0,0,0,0.880801318004542,7.20194031091441,5.81578897663411,6.07630438004385,2.46307021663917,2.91504299417082,1.80302897343931,27.3348688905582,9.06902264853143,11.886618998203,25.1023359858139,8.63452564845834,7.74265927237759,40.2769349251011,20.4928565223281,17.2632027818667,29.9928742240858,10.3277549373412,16.251178391321,22.40083840557,12.5536829026609,8.98893937780339,24.7927952820431,14.7627352455003,8.95071976118658,58.7135314332355,27.3265210941636,30.2619572878213,21.7656928971438,8.5107783703671,7.4738669879469,30.4010884960659,11.9941071236646,13.2485195270121,27.848377121135,13.2579948955523,10.1267963981083,3.59133986730301,3.82687739937078,4.40283155567589,12.468478057261,12.3145052130035,13.6616748692518,1.99508920618874,2.98375015798635,2.00930569141097,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,1.14950487990897,0.661044872784862,0,0,0,0,2.64342657158052,1.68152568894461,2.63384084775077,0,0,0.205601498999509,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0.294605907474837,0.221533894583621,0.812411591295047,0.128091319725675,0.390178042679635,0.657751618414705,1.10540007114339,0.289803085735052,0,0,0,0.453237370790265,0,0.68725489096526,2.02415753615602,0.95569624297229,0,0,0.752875595388864,0.383959833463255,1.24930726552346,1.4206635122641,0,0.201606743224732,0,0,0,1.34140171940727,0.12786256184353,0.722878304769133,0,0.579386075843295,0,0,0,0,0,0.0654895377488563,0,0,3.24547393654683,1.0447784237956,1.06366368415092,1.19245312152671,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.8053419282615,58.1670396222488,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0.816616685019573,0.122834317311768,0.206651562351531,2.37600571456411,0,0,0,0,0,0,0,0,0.751190294532984,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15542515218493,0.702012795417713,1.33768046059855,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0.87192013766656,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.899756920638513,4.86495122564762,10.5473989200747,6.32501818449095,0,0,0,0.723906533337896,0,0,0.112085143993527,0.985153801009636,0.215627574859517,0.513372145118994,0,0,0,0.167516265334349,0,50.1834706044612,11.966458368161,51.8019391795044,0.24538298343828,0.500170521059677,0,0,0,0,0.468565659970853,0,0,0,0,0,0,0.195801157462741,0.343143423810856,3.72182447021197,5.82428342210265,3.52200940751366,0,0,0,0,0,0,0,0,0,2.96836132889982,0.154209693802656,0,0.410635780069046,0,0.348631135379878,0,0,0,0.68888668898764,0,0.131124414959424,0,0.308061348417659,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0,0,0,0,0,0,1.25924938732256,0,2.15623506123262,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,17.3036577638212,0,0.272999822815972,1.41405431953713,0,0,0.66343897524122,1.31535265576129,0,0,0,0.6196469961995,0,0,0,0,0.354761064070598,1.68886108238131,1.64647446479951,0,0,0,0,0,1.69458841398202,0,0,0,0,8.11916174771471,7.64637207142375,17.0894156152249,6.19402616190251,7.4045209155515,14.2664128462398,9.72056587028607,9.51750211553125,0,0,0,0,0,0,0,11.5756035431034,1.53204296105893,1.90506224451495,12.0110117901586,4.21195767170188,2.28234679033192,2.82023812391442,0,0,5.13881840331838,9.88818565236133,12.3495408930195,32.9765130965534,1.22896305723383,0,0,19.7341976356061,8.90899756464776,1.23087398947712,0,0,93.0514233579807,0,1.46508179271894,0,0.557216921387392,0,0,0,0,1.9882952955326,0.140669416410513,0.222617410045812,0.329607748453519,0,0.398495976502139,0.828851746593443,0,0,0.246169610922139,0,0,0,2.55786185113436,0.690503839458535,7.18449277040819,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.219385397153973,0,0,0.0769502585037971,1.25336261431701,0,0,0,0.31900115973192,0,1.06606955203727,0,0,1.49590513710141,0.676786981851542,0.392125068635479,0.335643173951685,0.75901493089674,0.953619473882272,0,0,0,0,0,1.50377859655677,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,2.65383634439649,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0.17198603247161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| ||
|short_description=p3@TNFSF13B | |||
}} | }} |
Latest revision as of 11:05, 16 September 2015
Short description: | p3@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | 0bp_to_ENST00000542136_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | E0ADT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.55e-56 | 98 |
blood island | 4.55e-56 | 98 |
hemolymphoid system | 2.81e-50 | 108 |
bone marrow | 1.60e-48 | 76 |
bone element | 1.58e-43 | 82 |
immune system | 4.88e-39 | 93 |
skeletal element | 6.46e-38 | 90 |
skeletal system | 7.86e-35 | 100 |
lateral plate mesoderm | 3.38e-22 | 203 |
musculoskeletal system | 3.12e-19 | 167 |
connective tissue | 1.06e-13 | 371 |
blood | 6.28e-12 | 15 |
haemolymphatic fluid | 6.28e-12 | 15 |
organism substance | 6.28e-12 | 15 |
mesoderm | 6.98e-12 | 315 |
mesoderm-derived structure | 6.98e-12 | 315 |
presumptive mesoderm | 6.98e-12 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.68e-10 | 31 |
leukemia | 7.12e-07 | 39 |