FFCP PHASE1:Hg19::chr6:32191791..32191818,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4855 | |EntrezGene=4855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7884 | |HGNC=7884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000473562_5end | |association_with_transcript=15bp_to_ENST00000473562_5end | ||
|cluster_id=chr6:32191791..32191818,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_NOTCH4_5end | |description=CAGE_peak_3_at_NOTCH4_5end | ||
|id=chr6:32191791..32191818,- | |id=chr6:32191791..32191818,- | ||
|ontology_enrichment_celltype=CL:0002139!7.29e-26!24;CL:0000115!7.68e-23!35;CL:0000071!1.89e-19!18;CL:0002546!1.89e-19!18;CL:0002078!3.70e-16!44;CL:1000413!2.43e-11!9;CL:0000213!2.04e-10!57;CL:0000215!2.04e-10!57;CL:0002543!2.88e-09!6;CL:0005020!5.76e-08!6;CL:0002138!5.76e-08!6;CL:0005022!5.76e-08!6;CL:0002544!9.91e-08!6 | |ontology_enrichment_celltype=CL:0002139!7.29e-26!24;CL:0000115!7.68e-23!35;CL:0000071!1.89e-19!18;CL:0002546!1.89e-19!18;CL:0002078!3.70e-16!44;CL:1000413!2.43e-11!9;CL:0000213!2.04e-10!57;CL:0000215!2.04e-10!57;CL:0002543!2.88e-09!6;CL:0005020!5.76e-08!6;CL:0002138!5.76e-08!6;CL:0005022!5.76e-08!6;CL:0002544!9.91e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.63e-31;24!CL:0000115;1.45e-27;36!CL:0000071;6.73e-25;18!CL:0002078;3.24e-15;45!CL:1000413;6.62e-13;9!CL:0002543;9.96e-13;6!CL:0000213;1.40e-10;58!CL:0000215;1.40e-10;58!CL:0002138;3.53e-08;6!CL:0002544;6.87e-08;6!CL:0002188;2.27e-07;5!CL:0002618;3.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.03e-32,24;CL:0000115,1.61e-31,36;CL:0000071,5.49e-25,18;CL:0002546,5.49e-25,18;CL:0002078,1.64e-23,45;CL:0000213,2.07e-16,58;CL:0000215,2.07e-16,58;CL:1000413,6.31e-13,9;CL:0002543,9.83e-13,6;CL:0005020,2.45e-08,6;CL:0002138,2.45e-08,6;CL:0005022,2.45e-08,6;CL:0002544,7.64e-08,6;CL:0002188,2.25e-07,5;CL:0002618,3.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;6.73e-25;18!CL:0005022;3.53e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.97e-63!115;UBERON:0001049!1.59e-28!57;UBERON:0005068!1.59e-28!57;UBERON:0006241!1.59e-28!57;UBERON:0007135!1.59e-28!57;UBERON:0004111!8.00e-27!241;UBERON:0000025!2.01e-25!194;UBERON:0000477!6.04e-24!286;UBERON:0003080!8.96e-24!42;UBERON:0002616!6.39e-23!59;UBERON:0002780!1.26e-22!41;UBERON:0001890!1.26e-22!41;UBERON:0006240!1.26e-22!41;UBERON:0003075!1.97e-22!86;UBERON:0007284!1.97e-22!86;UBERON:0002346!1.02e-20!90;UBERON:0001017!3.28e-20!82;UBERON:0005743!1.06e-19!86;UBERON:0001986!1.89e-19!18;UBERON:0004638!1.89e-19!18;UBERON:0004852!1.89e-19!18;UBERON:0000955!2.17e-18!69;UBERON:0006238!2.17e-18!69;UBERON:0002020!1.25e-17!34;UBERON:0003528!1.25e-17!34;UBERON:0001893!2.62e-17!34;UBERON:0002791!1.35e-16!33;UBERON:0000073!1.91e-16!94;UBERON:0001016!1.91e-16!94;UBERON:0000119!7.52e-16!312;UBERON:0000483!8.77e-16!309;UBERON:0001869!1.08e-15!32;UBERON:0003056!4.44e-15!61;UBERON:0000487!8.14e-15!22;UBERON:0002619!6.93e-14!22;UBERON:0001950!9.50e-14!20;UBERON:0006914!2.42e-12!25;UBERON:0000956!1.26e-11!25;UBERON:0000203!1.26e-11!25;UBERON:0000153!1.96e-11!129;UBERON:0007811!1.96e-11!129;UBERON:0003915!2.43e-11!9;UBERON:0004700!2.43e-11!9;UBERON:0001917!2.43e-11!9;UBERON:0000033!4.80e-10!123;UBERON:0002298!9.35e-10!8;UBERON:0004121!1.13e-09!169;UBERON:0000467!1.18e-09!625;UBERON:0000480!1.42e-09!626;UBERON:0000468!2.08e-09!659;UBERON:0000055!4.17e-09!69;UBERON:0000924!4.26e-09!173;UBERON:0006601!4.26e-09!173;UBERON:0002308!8.93e-08!9;UBERON:0000125!8.93e-08!9;UBERON:0004872!1.61e-07!84;UBERON:0002049!2.08e-07!79;UBERON:0007798!2.08e-07!79;UBERON:0001638!2.26e-07!9;UBERON:0003920!2.26e-07!9;UBERON:0004582!2.26e-07!9;UBERON:0000922!4.07e-07!612;UBERON:0001009!4.23e-07!113;UBERON:0001894!5.17e-07!7;UBERON:0006222!5.17e-07!7;UBERON:0002465!5.42e-07!10;UBERON:0003103!6.47e-07!69;UBERON:0002050!9.13e-07!605;UBERON:0005423!9.13e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.73e-25;18!UBERON:0001986;6.73e-25;18!UBERON:0004852;6.73e-25;18!UBERON:0000487;1.75e-19;22!UBERON:0006914;1.43e-16;25!UBERON:0003915;6.62e-13;9!UBERON:0004700;6.62e-13;9!UBERON:0001917;6.62e-13;9!UBERON:0001638;1.50e-10;9!UBERON:0003920;1.50e-10;9!UBERON:0004582;1.50e-10;9!UBERON:0000490;1.70e-10;33!UBERON:0000073;7.32e-09;53!UBERON:0002616;7.32e-09;53!UBERON:0003528;8.44e-09;34!UBERON:0002020;8.44e-09;34!UBERON:0002791;8.47e-09;32!UBERON:0002780;1.48e-08;41!UBERON:0001890;1.48e-08;41!UBERON:0007023;3.44e-08;114!UBERON:0001869;1.44e-07;32!UBERON:0001893;1.93e-07;34!UBERON:0002298;3.04e-07;6!UBERON:0002619;4.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.51e-33,114;UBERON:0004638,5.49e-25,18;UBERON:0001986,5.49e-25,18;UBERON:0004852,5.49e-25,18;UBERON:0004111,4.56e-21,240;UBERON:0000025,2.60e-20,192;UBERON:0000487,1.49e-19,22;UBERON:0006914,1.24e-16,25;UBERON:0001049,7.86e-14,56;UBERON:0005068,7.86e-14,56;UBERON:0006241,7.86e-14,56;UBERON:0007135,7.86e-14,56;UBERON:0000073,1.22e-13,53;UBERON:0002616,1.22e-13,53;UBERON:0000055,1.99e-13,68;UBERON:0003915,6.31e-13,9;UBERON:0004700,6.31e-13,9;UBERON:0001917,6.31e-13,9;UBERON:0000483,2.62e-11,306;UBERON:0000119,4.95e-11,309;UBERON:0003075,6.35e-11,82;UBERON:0007284,6.35e-11,82;UBERON:0002049,9.85e-11,78;UBERON:0007798,9.85e-11,78;UBERON:0003528,1.69e-10,34;UBERON:0002020,1.69e-10,34;UBERON:0001009,1.96e-10,112;UBERON:0001638,2.12e-10,9;UBERON:0003920,2.12e-10,9;UBERON:0004582,2.12e-10,9;UBERON:0002780,2.64e-10,41;UBERON:0001890,2.64e-10,41;UBERON:0003080,2.64e-10,41;UBERON:0006240,2.64e-10,41;UBERON:0004872,2.68e-10,83;UBERON:0002346,4.55e-10,86;UBERON:0007500,5.07e-10,59;UBERON:0001981,5.07e-10,59;UBERON:0004537,5.07e-10,59;UBERON:0006965,5.07e-10,59;UBERON:0000955,6.83e-10,68;UBERON:0006238,6.83e-10,68;UBERON:0002791,7.66e-10,32;UBERON:0001017,9.94e-10,81;UBERON:0010314,1.79e-09,132;UBERON:0001893,4.71e-09,34;UBERON:0003914,1.19e-08,117;UBERON:0001869,1.68e-08,32;UBERON:0004535,2.11e-08,109;UBERON:0001016,4.37e-08,89;UBERON:0002298,1.69e-07,6;UBERON:0002619,3.84e-07,22;UBERON:0010371,4.25e-07,104 | |||
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|short_description=p3@NOTCH4 | |short_description=p3@NOTCH4 | ||
}} | }} |
Latest revision as of 02:33, 18 September 2015
Short description: | p3@NOTCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NOTCH4_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 15bp_to_ENST00000473562_5end |
EntrezGene: | NOTCH4 |
HGNC: | 7884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.03e-32 | 24 |
endothelial cell | 1.61e-31 | 36 |
blood vessel endothelial cell | 5.49e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.49e-25 | 18 |
meso-epithelial cell | 1.64e-23 | 45 |
lining cell | 2.07e-16 | 58 |
barrier cell | 2.07e-16 | 58 |
endothelial cell of artery | 6.31e-13 | 9 |
vein endothelial cell | 9.83e-13 | 6 |
lymphangioblast | 2.45e-08 | 6 |
endothelial cell of lymphatic vessel | 2.45e-08 | 6 |
vascular lymphangioblast | 2.45e-08 | 6 |
aortic endothelial cell | 7.64e-08 | 6 |
glomerular endothelial cell | 2.25e-07 | 5 |
endothelial cell of umbilical vein | 3.58e-07 | 3 |