FFCP PHASE1:Hg19::chr22:38369134..38369144,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:38369134..38369144,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr22:38369134..38369144,- | |description=CAGE_peak_at_chr22:38369134..38369144,- | ||
|id=chr22:38369134..38369144,- | |id=chr22:38369134..38369144,- | ||
|ontology_enrichment_celltype=CL:0000147!4.40e-18!14;CL:0000148!2.70e-17!10;CL:0000541!2.70e-17!10;CL:0000710!7.49e-08!20 | |ontology_enrichment_celltype=CL:0000147!4.40e-18!14;CL:0000148!2.70e-17!10;CL:0000541!2.70e-17!10;CL:0000710!7.49e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.26e-36;10!CL:0000147;1.52e-25;14!CL:0000710;8.77e-18;20!CL:0002567;3.86e-14;3!CL:0000075;4.48e-13;27!CL:0002566;3.11e-11;1!CL:0002077;9.66e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.87e-36,10;CL:0000541,6.87e-36,10;CL:0000147,1.47e-25,14;CL:0000710,8.54e-18,20;CL:0002567,4.14e-14,3;CL:0000075,4.39e-13,27;CL:0002566,2.68e-11,1;CL:0002077,2.64e-10,34;CL:0000333,4.69e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.24e-11;1!UBERON:0008801;1.24e-11;1!UBERON:0006601;2.15e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.48e-58!115;UBERON:0001049!1.69e-53!57;UBERON:0005068!1.69e-53!57;UBERON:0006241!1.69e-53!57;UBERON:0007135!1.69e-53!57;UBERON:0005743!1.76e-49!86;UBERON:0001017!6.67e-45!82;UBERON:0000073!9.92e-44!94;UBERON:0001016!9.92e-44!94;UBERON:0003075!9.03e-43!86;UBERON:0007284!9.03e-43!86;UBERON:0002616!2.95e-42!59;UBERON:0002020!5.71e-41!34;UBERON:0003528!5.71e-41!34;UBERON:0001893!9.69e-41!34;UBERON:0002346!2.25e-40!90;UBERON:0000955!4.84e-39!69;UBERON:0006238!4.84e-39!69;UBERON:0002780!5.04e-39!41;UBERON:0001890!5.04e-39!41;UBERON:0006240!5.04e-39!41;UBERON:0002791!1.09e-38!33;UBERON:0003080!6.21e-38!42;UBERON:0001869!3.10e-36!32;UBERON:0000033!3.47e-31!123;UBERON:0000153!9.34e-31!129;UBERON:0007811!9.34e-31!129;UBERON:0003056!2.71e-30!61;UBERON:0004121!5.91e-30!169;UBERON:0002619!3.66e-29!22;UBERON:0000924!5.85e-29!173;UBERON:0006601!5.85e-29!173;UBERON:0000956!2.95e-25!25;UBERON:0000203!2.95e-25!25;UBERON:0001950!1.39e-24!20;UBERON:0002308!5.04e-18!9;UBERON:0000125!5.04e-18!9;UBERON:0002420!5.78e-18!9;UBERON:0007245!5.78e-18!9;UBERON:0010009!5.78e-18!9;UBERON:0010011!5.78e-18!9;UBERON:0000454!5.78e-18!9;UBERON:0003076!3.26e-16!15;UBERON:0003057!3.26e-16!15;UBERON:0000200!1.57e-15!6;UBERON:0000349!1.45e-13!5;UBERON:0009663!3.19e-13!7;UBERON:0002298!8.83e-12!8;UBERON:0001871!1.18e-11!7;UBERON:0000369!1.34e-10!4;UBERON:0002435!1.34e-10!4;UBERON:0000204!1.34e-10!4;UBERON:0010082!1.34e-10!4;UBERON:0004111!1.61e-10!241;UBERON:0004733!4.72e-10!12;UBERON:0002028!4.72e-10!12;UBERON:0007277!4.72e-10!12;UBERON:0000025!1.19e-09!194;UBERON:0000475!2.41e-09!365;UBERON:0004732!3.42e-09!13;UBERON:0006331!3.85e-09!3;UBERON:0002240!4.07e-09!3;UBERON:0002771!1.12e-08!3;UBERON:0000988!1.15e-08!3;UBERON:0005383!1.21e-08!3;UBERON:0005382!1.21e-08!3;UBERON:0000477!2.26e-08!286;UBERON:0001872!2.73e-08!5;UBERON:0006947!4.50e-08!3;UBERON:0004054!4.50e-08!3;UBERON:0000064!5.88e-08!219;UBERON:0002680!3.42e-07!9;UBERON:0001895!3.42e-07!9;UBERON:0010092!3.42e-07!9;UBERON:0001829!4.62e-07!2;UBERON:0000062!8.49e-07!511;UBERON:0001954!9.59e-07!2;UBERON:0003022!9.59e-07!2;UBERON:0002421!9.59e-07!2;UBERON:0002600!9.59e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.69e-21;2!UBERON:0003528;1.01e-13;34!UBERON:0002020;1.01e-13;34!UBERON:0002791;1.37e-13;32!UBERON:0001831;1.24e-11;1!UBERON:0001736;1.24e-11;1!UBERON:0001567;1.24e-11;1!UBERON:0002038;3.11e-11;1!UBERON:0009661;3.11e-11;1!UBERON:0002950;3.11e-11;1!UBERON:0001891;3.11e-11;1!UBERON:0000073;5.36e-11;53!UBERON:0002616;5.36e-11;53!UBERON:0001893;5.44e-11;34!UBERON:0002780;1.05e-10;41!UBERON:0001890;1.05e-10;41!UBERON:0002619;1.21e-10;22!UBERON:0002420;1.36e-10;9!UBERON:0000125;1.36e-10;9!UBERON:0007245;1.36e-10;9!UBERON:0002308;1.36e-10;9!UBERON:0010009;1.36e-10;9!UBERON:0010011;1.36e-10;9!UBERON:0000454;1.36e-10;9!UBERON:0001869;1.36e-10;32!UBERON:0000956;2.11e-09;25!UBERON:0000203;2.11e-09;25!UBERON:0000349;7.54e-09;5!UBERON:0001044;8.95e-08;6!UBERON:0003293;8.95e-08;6!UBERON:0003294;8.95e-08;6!UBERON:0010047;8.95e-08;6!UBERON:0003408;8.95e-08;6!UBERON:0000167;8.95e-08;6!UBERON:0001950;9.53e-08;20!UBERON:0000200;1.63e-07;6!UBERON:0002298;1.63e-07;6!UBERON:0001017;1.97e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.08e-21,2;UBERON:0001049,2.50e-19,56;UBERON:0005068,2.50e-19,56;UBERON:0006241,2.50e-19,56;UBERON:0007135,2.50e-19,56;UBERON:0003528,3.20e-17,34;UBERON:0002020,3.20e-17,34;UBERON:0000073,7.11e-17,53;UBERON:0002616,7.11e-17,53;UBERON:0002780,3.49e-14,41;UBERON:0001890,3.49e-14,41;UBERON:0003080,3.49e-14,41;UBERON:0006240,3.49e-14,41;UBERON:0002791,3.92e-14,32;UBERON:0001893,2.75e-13,34;UBERON:0001017,8.99e-13,81;UBERON:0003075,8.99e-13,82;UBERON:0007284,8.99e-13,82;UBERON:0000955,1.06e-12,68;UBERON:0006238,1.06e-12,68;UBERON:0002346,4.13e-12,86;UBERON:0010371,9.88e-12,104;UBERON:0001736,1.31e-11,1;UBERON:0006298,1.31e-11,1;UBERON:0001831,1.45e-11,1;UBERON:0001567,1.45e-11,1;UBERON:0008801,1.45e-11,1;UBERON:0001016,2.30e-11,89;UBERON:0002038,6.00e-11,1;UBERON:0009661,6.00e-11,1;UBERON:0002950,6.00e-11,1;UBERON:0001891,6.00e-11,1;UBERON:0009616,6.00e-11,1;UBERON:0010286,6.00e-11,1;UBERON:0002619,8.93e-11,22;UBERON:0007023,1.02e-10,114;UBERON:0002420,1.30e-10,9;UBERON:0007245,1.30e-10,9;UBERON:0010009,1.30e-10,9;UBERON:0010011,1.30e-10,9;UBERON:0000454,1.30e-10,9;UBERON:0001869,1.46e-10,32;UBERON:0000125,1.80e-10,9;UBERON:0002308,1.80e-10,9;UBERON:0000956,1.62e-09,25;UBERON:0000203,1.62e-09,25;UBERON:0003056,2.64e-09,61;UBERON:0000349,4.87e-09,5;UBERON:0004121,5.20e-09,171;UBERON:0000924,5.20e-09,171;UBERON:0006601,5.20e-09,171;UBERON:0001950,7.96e-08,20;UBERON:0001044,9.58e-08,6;UBERON:0003293,9.58e-08,6;UBERON:0003294,9.58e-08,6;UBERON:0010047,9.58e-08,6;UBERON:0000167,9.58e-08,6;UBERON:0000200,1.43e-07,6;UBERON:0002298,1.98e-07,6;UBERON:0010314,2.36e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26995788584338,1.52795370223311,1.17217447210047,0,4.11309970813294,2.40274446275134,7.14566081576446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.482385754501632,0,0.331737779793674,0.886642856860642,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,0.937057782901357,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.22026264901963,0.625954653532499,0,1.22021956690538,0.434674820589684,0,0,0.303298235083296,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,1.23069818544453,0,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.0634158101939068,0,2.19303106742873,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.263091094251396,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.981542335574726,0.594092800654172,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,2.2936464170227,1.00337708206016,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,1.03432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26995788584338,1.52795370223311,1.17217447210047,0,4.11309970813294,2.40274446275134,7.14566081576446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.482385754501632,0,0.331737779793674,0.886642856860642,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808813595768125,0,0.937057782901357,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.22026264901963,0.625954653532499,0,1.22021956690538,0.434674820589684,0,0,0.303298235083296,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,1.23069818544453,0,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.620060389503552,0.0634158101939068,0,2.19303106742873,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0.263091094251396,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.571812353413251,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.981542335574726,0.594092800654172,1.2679671827502,0,0,0,0,0,0,0,0.730336388246517,2.2936464170227,1.00337708206016,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,1.03432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr22:38369134..38369144,- | |short_description=p@chr22:38369134..38369144,- | ||
}} | }} |
Latest revision as of 21:06, 28 July 2015
Short description: | p@chr22:38369134..38369144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38369134..38369144, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.87e-36 | 10 |
melanoblast | 6.87e-36 | 10 |
pigment cell | 1.47e-25 | 14 |
neurecto-epithelial cell | 8.54e-18 | 20 |
light melanocyte | 4.14e-14 | 3 |
columnar/cuboidal epithelial cell | 4.39e-13 | 27 |
dark melanocyte | 2.68e-11 | 1 |
ecto-epithelial cell | 2.64e-10 | 34 |
migratory neural crest cell | 4.69e-08 | 41 |