FFCP PHASE1:Hg19::chr22:50643240..50643252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50643240..50643252,+ | |||
|coexpression_cluster_id=C444 | |||
|description=CAGE_peak_at_chr22:50643240..50643252,+ | |description=CAGE_peak_at_chr22:50643240..50643252,+ | ||
|id=chr22:50643240..50643252,+ | |id=chr22:50643240..50643252,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.74e-105!42;CL:0000860!6.56e-98!45;CL:0002194!1.76e-70!63;CL:0000576!1.76e-70!63;CL:0000040!1.76e-70!63;CL:0000559!1.76e-70!63;CL:0002009!4.29e-68!65;CL:0000766!2.69e-64!76;CL:0000839!1.04e-62!70;CL:0000557!1.00e-61!71;CL:0000763!4.63e-41!112;CL:0000049!4.63e-41!112;CL:0002087!5.78e-36!119;CL:0000738!3.16e-33!140;CL:0002031!5.15e-32!124;CL:0000037!1.87e-25!172;CL:0000566!1.87e-25!172;CL:0002032!3.42e-25!165;CL:0000837!3.42e-25!165;CL:0000988!1.39e-23!182;CL:0002393!5.90e-15!9;CL:0002397!5.90e-15!9;CL:0000134!8.89e-11!358;CL:0000219!1.53e-10!390;CL:0002320!2.15e-10!365;CL:0000048!1.96e-07!430;CL:0000723!3.32e-07!436;CL:0000034!6.53e-07!444 | |ontology_enrichment_celltype=CL:0002057!1.74e-105!42;CL:0000860!6.56e-98!45;CL:0002194!1.76e-70!63;CL:0000576!1.76e-70!63;CL:0000040!1.76e-70!63;CL:0000559!1.76e-70!63;CL:0002009!4.29e-68!65;CL:0000766!2.69e-64!76;CL:0000839!1.04e-62!70;CL:0000557!1.00e-61!71;CL:0000763!4.63e-41!112;CL:0000049!4.63e-41!112;CL:0002087!5.78e-36!119;CL:0000738!3.16e-33!140;CL:0002031!5.15e-32!124;CL:0000037!1.87e-25!172;CL:0000566!1.87e-25!172;CL:0002032!3.42e-25!165;CL:0000837!3.42e-25!165;CL:0000988!1.39e-23!182;CL:0002393!5.90e-15!9;CL:0002397!5.90e-15!9;CL:0000134!8.89e-11!358;CL:0000219!1.53e-10!390;CL:0002320!2.15e-10!365;CL:0000048!1.96e-07!430;CL:0000723!3.32e-07!436;CL:0000034!6.53e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-75;33!CL:0002057;1.51e-75;33!CL:0000473;8.31e-54;39!CL:0000234;8.31e-54;39!CL:0000576;2.23e-38;48!CL:0000766;4.80e-20;69!CL:0000763;1.44e-16;100!CL:0002087;3.26e-13;104!CL:0000738;1.45e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.28e-69,42;CL:0002057,3.28e-69,42;CL:0000473,2.34e-60,48;CL:0000234,2.34e-60,48;CL:0002194,5.93e-48,59;CL:0000576,5.93e-48,59;CL:0000040,5.93e-48,59;CL:0000559,5.93e-48,59;CL:0002009,2.37e-46,61;CL:0000839,9.14e-43,66;CL:0000557,4.12e-42,67;CL:0000766,4.15e-39,72;CL:0000763,1.34e-25,108;CL:0000049,1.34e-25,108;CL:0002087,6.07e-24,115;CL:0002031,7.08e-23,120;CL:0000738,5.53e-20,136;CL:0002032,1.33e-16,161;CL:0000837,1.33e-16,161;CL:0000037,7.84e-16,168;CL:0000988,6.23e-15,177;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-52;42!CL:0000049;1.56e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.13e-54!80;UBERON:0001474!1.21e-49!86;UBERON:0002390!4.82e-46!102;UBERON:0003061!4.82e-46!102;UBERON:0002193!3.34e-41!112;UBERON:0004765!4.08e-41!101;UBERON:0001434!4.08e-41!101;UBERON:0002405!1.51e-37!115;UBERON:0002204!1.08e-21!167;UBERON:0003081!7.99e-20!216;UBERON:0002384!7.17e-10!375;UBERON:0000926!9.14e-07!448;UBERON:0004120!9.14e-07!448;UBERON:0006603!9.14e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.50e-37,76;UBERON:0001474,3.48e-34,82;UBERON:0004765,5.05e-31,90;UBERON:0002405,5.63e-30,93;UBERON:0002390,2.27e-28,98;UBERON:0003061,2.27e-28,98;UBERON:0001434,8.99e-28,100;UBERON:0002193,1.34e-25,108;UBERON:0002204,6.14e-16,167;UBERON:0003081,9.01e-13,203;UBERON:0000926,1.72e-07,315;UBERON:0004120,1.72e-07,315;UBERON:0006603,1.72e-07,315;UBERON:0002384,4.69e-07,371 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,2.03557534291391,0.755751887377619,0.485168122375632,0.232429036905685,0.411167888021826,0,2.3015391385772,1.2808035326455,0.236482229888585,1.03423704220986,0,0,1.69418105588344,0.545812300115692,0.224723484445085,8.26426509401437,0.320929027076094,2.55734850319616,2.96866170168044,1.39624560335142,0,9.57690487474327,1.13477044938228,0.622822248995575,2.76373531782418,1.5644487552606,0.217188844705117,23.005181100068,2.57794345191295,1.89877432464531,0.211255286311942,0.425208599930087,0.209658645508376,0.561643155732475,0.450530678524519,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:50643240..50643252,+ | |short_description=p@chr22:50643240..50643252,+ | ||
}} | }} |
Latest revision as of 22:25, 28 July 2015
Short description: | p@chr22:50643240..50643252, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50643240..50643252, + |
Coexpression cluster: | C444_CD14_trachea_tonsil_tongue_throat_salivary_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.28e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.28e-69 | 42 |
defensive cell | 2.34e-60 | 48 |
phagocyte | 2.34e-60 | 48 |
monopoietic cell | 5.93e-48 | 59 |
monocyte | 5.93e-48 | 59 |
monoblast | 5.93e-48 | 59 |
promonocyte | 5.93e-48 | 59 |
macrophage dendritic cell progenitor | 2.37e-46 | 61 |
myeloid lineage restricted progenitor cell | 9.14e-43 | 66 |
granulocyte monocyte progenitor cell | 4.12e-42 | 67 |
myeloid leukocyte | 4.15e-39 | 72 |
myeloid cell | 1.34e-25 | 108 |
common myeloid progenitor | 1.34e-25 | 108 |
nongranular leukocyte | 6.07e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.08e-23 | 120 |
leukocyte | 5.53e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.33e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-16 | 161 |
hematopoietic stem cell | 7.84e-16 | 168 |
hematopoietic cell | 6.23e-15 | 177 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.50e-37 | 76 |
bone element | 3.48e-34 | 82 |
skeletal element | 5.05e-31 | 90 |
immune system | 5.63e-30 | 93 |
hematopoietic system | 2.27e-28 | 98 |
blood island | 2.27e-28 | 98 |
skeletal system | 8.99e-28 | 100 |
hemolymphoid system | 1.34e-25 | 108 |
musculoskeletal system | 6.14e-16 | 167 |
lateral plate mesoderm | 9.01e-13 | 203 |
mesoderm | 1.72e-07 | 315 |
mesoderm-derived structure | 1.72e-07 | 315 |
presumptive mesoderm | 1.72e-07 | 315 |
connective tissue | 4.69e-07 | 371 |