FFCP PHASE1:Hg19::chr8:134584228..134584247,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6482 | |EntrezGene=6482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |HGNC=10862 | ||
|TSSclassifier=strong | |||
|UniProt=Q11201 | |UniProt=Q11201 | ||
|association_with_transcript=-45bp_to_ENST00000319914,NM_003033,NM_173344,uc003yuk.2,uc003yum.2_5end | |association_with_transcript=-45bp_to_ENST00000319914,NM_003033,NM_173344,uc003yuk.2,uc003yum.2_5end | ||
|cluster_id=chr8:134584228..134584247,- | |||
|description=CAGE_peak_3_at_ST3GAL1_5end | |description=CAGE_peak_3_at_ST3GAL1_5end | ||
|id=chr8:134584228..134584247,- | |id=chr8:134584228..134584247,- | ||
|ontology_enrichment_celltype=CL:0000037!8.38e-43!172;CL:0000566!8.38e-43!172;CL:0000988!9.14e-41!182;CL:0002032!1.39e-40!165;CL:0000837!1.39e-40!165;CL:0000738!1.62e-40!140;CL:0002087!1.48e-35!119;CL:0002031!1.79e-34!124;CL:0000766!1.02e-26!76;CL:0000763!7.94e-26!112;CL:0000049!7.94e-26!112;CL:0002057!1.35e-24!42;CL:0000839!6.48e-23!70;CL:0000860!6.40e-22!45;CL:0000557!9.87e-21!71;CL:0002194!1.35e-20!63;CL:0000576!1.35e-20!63;CL:0000040!1.35e-20!63;CL:0000559!1.35e-20!63;CL:0002009!9.28e-19!65;CL:0000542!3.57e-13!53;CL:0000051!3.57e-13!53;CL:0000838!5.26e-13!52;CL:0000084!6.71e-13!25;CL:0000827!6.71e-13!25;CL:0000791!4.06e-11!18;CL:0000789!4.06e-11!18;CL:0002420!4.06e-11!18;CL:0002419!4.06e-11!18;CL:0000790!4.06e-11!18;CL:0000134!7.39e-08!358;CL:0000625!1.78e-07!11;CL:0002320!3.00e-07!365 | |ontology_enrichment_celltype=CL:0000037!8.38e-43!172;CL:0000566!8.38e-43!172;CL:0000988!9.14e-41!182;CL:0002032!1.39e-40!165;CL:0000837!1.39e-40!165;CL:0000738!1.62e-40!140;CL:0002087!1.48e-35!119;CL:0002031!1.79e-34!124;CL:0000766!1.02e-26!76;CL:0000763!7.94e-26!112;CL:0000049!7.94e-26!112;CL:0002057!1.35e-24!42;CL:0000839!6.48e-23!70;CL:0000860!6.40e-22!45;CL:0000557!9.87e-21!71;CL:0002194!1.35e-20!63;CL:0000576!1.35e-20!63;CL:0000040!1.35e-20!63;CL:0000559!1.35e-20!63;CL:0002009!9.28e-19!65;CL:0000542!3.57e-13!53;CL:0000051!3.57e-13!53;CL:0000838!5.26e-13!52;CL:0000084!6.71e-13!25;CL:0000827!6.71e-13!25;CL:0000791!4.06e-11!18;CL:0000789!4.06e-11!18;CL:0002420!4.06e-11!18;CL:0002419!4.06e-11!18;CL:0000790!4.06e-11!18;CL:0000134!7.39e-08!358;CL:0000625!1.78e-07!11;CL:0002320!3.00e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.05e-19;33!CL:0002057;4.05e-19;33!CL:0000576;4.58e-16;48!CL:0000473;1.88e-15;39!CL:0000234;1.88e-15;39!CL:0000766;2.49e-13;69!CL:0000084;2.66e-13;25!CL:0002087;4.93e-12;104!CL:0000791;1.65e-11;18!CL:0000789;1.65e-11;18!CL:0002419;1.65e-11;18!CL:0000763;6.20e-10;100!CL:0000738;9.49e-10;136!CL:0000988;1.26e-08;177!CL:0000542;5.22e-08;53!CL:0000625;1.01e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.73e-45,168;CL:0000988,1.37e-43,177;CL:0000738,2.54e-43,136;CL:0002032,6.99e-43,161;CL:0000837,6.99e-43,161;CL:0002087,2.98e-38,115;CL:0002031,4.22e-37,120;CL:0000766,2.60e-29,72;CL:0000763,1.39e-27,108;CL:0000049,1.39e-27,108;CL:0000839,2.61e-25,66;CL:0000860,4.25e-25,42;CL:0002057,4.25e-25,42;CL:0000473,2.69e-24,48;CL:0000234,2.69e-24,48;CL:0000557,5.77e-23,67;CL:0002194,6.08e-23,59;CL:0000576,6.08e-23,59;CL:0000040,6.08e-23,59;CL:0000559,6.08e-23,59;CL:0002009,6.20e-21,61;CL:0000542,1.33e-13,53;CL:0000051,1.33e-13,53;CL:0000838,1.98e-13,52;CL:0000084,3.80e-13,25;CL:0000827,3.80e-13,25;CL:0000791,2.51e-11,18;CL:0000789,2.51e-11,18;CL:0002420,2.51e-11,18;CL:0002419,2.51e-11,18;CL:0000790,2.51e-11,18;CL:0000134,2.32e-08,354;CL:0002320,1.25e-07,361;CL:0000625,1.32e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-18;42!CL:0000790;1.65e-11;18!CL:0000051;5.22e-08;53!CL:0000049;6.61e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-26!102;UBERON:0003061!1.03e-26!102;UBERON:0002193!1.99e-25!112;UBERON:0002371!1.39e-18!80;UBERON:0003081!2.07e-16!216;UBERON:0001474!4.03e-16!86;UBERON:0002405!1.11e-14!115;UBERON:0004765!3.82e-10!101;UBERON:0001434!3.82e-10!101;UBERON:0000178!2.34e-08!15;UBERON:0000179!2.34e-08!15;UBERON:0000463!2.34e-08!15;UBERON:0007023!2.73e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-08;15!UBERON:0000179;1.40e-08;15!UBERON:0000463;1.40e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.93e-29,98;UBERON:0003061,3.93e-29,98;UBERON:0002193,2.10e-27,108;UBERON:0002371,1.42e-20,76;UBERON:0002405,2.03e-20,93;UBERON:0003081,1.20e-18,203;UBERON:0001474,4.82e-18,82;UBERON:0004765,1.17e-13,90;UBERON:0001434,2.99e-10,100;UBERON:0000178,1.66e-08,15;UBERON:0000179,1.66e-08,15;UBERON:0000463,1.66e-08,15;UBERON:0007023,3.86e-07,114;UBERON:0002384,7.33e-07,371;UBERON:0002204,9.03e-07,167 | |||
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| ||
|short_description=p3@ST3GAL1 | |short_description=p3@ST3GAL1 | ||
}} | }} |
Latest revision as of 16:38, 16 September 2015
Short description: | p3@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ST3GAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000319914, NM_003033, NM_173344, uc003yuk.2, uc003yum.2_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | Q11201 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.93e-29 | 98 |
blood island | 3.93e-29 | 98 |
hemolymphoid system | 2.10e-27 | 108 |
bone marrow | 1.42e-20 | 76 |
immune system | 2.03e-20 | 93 |
lateral plate mesoderm | 1.20e-18 | 203 |
bone element | 4.82e-18 | 82 |
skeletal element | 1.17e-13 | 90 |
skeletal system | 2.99e-10 | 100 |
blood | 1.66e-08 | 15 |
haemolymphatic fluid | 1.66e-08 | 15 |
organism substance | 1.66e-08 | 15 |
adult organism | 3.86e-07 | 114 |
connective tissue | 7.33e-07 | 371 |
musculoskeletal system | 9.03e-07 | 167 |