FFCP PHASE1:Hg19::chr14:90528333..90528366,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:90528333..90528366,+
|short_description=p1@KCNK13
|description=CAGE_peak_1_at_KCNK13_5end
|association_with_transcript=224bp_to_ENST00000282146_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56659 | |EntrezGene=56659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6275 | |HGNC=6275 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HB14 | |UniProt=Q9HB14 | ||
|association_with_transcript=224bp_to_ENST00000282146_5end | |||
|cluster_id=chr14:90528333..90528366,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_1_at_KCNK13_5end | |||
|id=chr14:90528333..90528366,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.79e-45!42;CL:0002009!9.01e-45!65;CL:0000557!5.74e-43!71;CL:0002194!3.12e-42!63;CL:0000576!3.12e-42!63;CL:0000040!3.12e-42!63;CL:0000559!3.12e-42!63;CL:0000860!4.41e-41!45;CL:0000766!2.20e-38!76;CL:0000839!9.84e-38!70;CL:0000763!3.14e-29!112;CL:0000049!3.14e-29!112;CL:0000738!8.05e-24!140;CL:0002087!1.80e-21!119;CL:0002031!5.57e-20!124;CL:0000037!8.20e-18!172;CL:0000566!8.20e-18!172;CL:0002032!5.74e-17!165;CL:0000837!5.74e-17!165;CL:0000988!1.10e-15!182;CL:0002393!6.44e-10!9;CL:0002397!6.44e-10!9;CL:0000990!2.70e-09!8;CL:0000451!3.13e-07!10;CL:0000840!7.95e-07!5;CL:0001029!7.95e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.67e-72;33!CL:0002057;7.67e-72;33!CL:0000473;2.02e-55;39!CL:0000234;2.02e-55;39!CL:0000576;2.00e-39;48!CL:0000766;1.48e-23;69!CL:0000840;3.09e-18;5!CL:0000990;4.79e-12;8!CL:0000763;1.36e-10;100!CL:0000451;8.65e-10;10!CL:0001014;1.73e-09;2!CL:0001016;1.73e-09;2!CL:0000738;2.23e-09;136!CL:0002087;1.09e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.12e-70,42;CL:0002057,4.12e-70,42;CL:0002009,9.61e-70,61;CL:0000557,9.19e-67,67;CL:0000473,3.38e-65,48;CL:0000234,3.38e-65,48;CL:0002194,2.21e-63,59;CL:0000576,2.21e-63,59;CL:0000040,2.21e-63,59;CL:0000559,2.21e-63,59;CL:0000839,5.93e-56,66;CL:0000766,3.35e-54,72;CL:0000763,4.37e-41,108;CL:0000049,4.37e-41,108;CL:0002031,8.39e-32,120;CL:0002087,3.95e-31,115;CL:0000738,5.45e-31,136;CL:0000037,4.08e-25,168;CL:0002032,6.63e-25,161;CL:0000837,6.63e-25,161;CL:0000988,2.04e-23,177;CL:0000840,2.90e-18,5;CL:0001029,2.90e-18,5;CL:0000990,4.60e-12,8;CL:0000451,8.37e-10,10;CL:0001014,1.60e-09,2;CL:0001016,1.60e-09,2;CL:0000134,1.41e-07,354;CL:0002320,2.84e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-54;42!CL:0000049;3.74e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-38!102;UBERON:0003061!2.56e-38!102;UBERON:0002193!7.28e-37!112;UBERON:0002371!6.07e-36!80;UBERON:0001474!4.26e-32!86;UBERON:0002405!1.17e-28!115;UBERON:0007023!5.06e-27!115;UBERON:0004765!9.43e-27!101;UBERON:0001434!9.43e-27!101;UBERON:0001049!5.03e-17!57;UBERON:0005068!5.03e-17!57;UBERON:0006241!5.03e-17!57;UBERON:0007135!5.03e-17!57;UBERON:0002780!9.60e-14!41;UBERON:0001890!9.60e-14!41;UBERON:0006240!9.60e-14!41;UBERON:0002616!1.33e-13!59;UBERON:0000955!2.13e-13!69;UBERON:0006238!2.13e-13!69;UBERON:0003080!3.12e-13!42;UBERON:0002204!5.70e-13!167;UBERON:0001017!2.36e-12!82;UBERON:0005743!6.27e-12!86;UBERON:0003075!2.78e-11!86;UBERON:0007284!2.78e-11!86;UBERON:0003081!4.69e-11!216;UBERON:0001893!5.99e-11!34;UBERON:0002020!7.47e-11!34;UBERON:0003528!7.47e-11!34;UBERON:0000062!2.05e-10!511;UBERON:0000073!2.36e-10!94;UBERON:0001016!2.36e-10!94;UBERON:0002346!2.70e-10!90;UBERON:0002791!2.71e-10!33;UBERON:0003056!1.31e-09!61;UBERON:0001869!3.09e-09!32;UBERON:0000153!1.66e-08!129;UBERON:0007811!1.66e-08!129;UBERON:0000467!2.15e-08!625;UBERON:0000480!2.55e-08!626;UBERON:0002619!5.89e-08!22;UBERON:0000923!6.83e-08!604;UBERON:0005291!6.83e-08!604;UBERON:0006598!6.83e-08!604;UBERON:0002532!6.83e-08!604;UBERON:0000033!6.93e-08!123;UBERON:0002050!8.06e-08!605;UBERON:0005423!8.06e-08!605;UBERON:0000922!1.06e-07!612;UBERON:0001950!1.24e-07!20;UBERON:0000468!3.80e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.32e-58,76;UBERON:0001474,3.26e-53,82;UBERON:0004765,8.20e-48,90;UBERON:0002405,5.04e-46,93;UBERON:0002390,5.20e-46,98;UBERON:0003061,5.20e-46,98;UBERON:0001434,2.90e-42,100;UBERON:0002193,5.07e-41,108;UBERON:0002204,9.15e-24,167;UBERON:0003081,4.98e-18,203;UBERON:0000926,1.52e-09,315;UBERON:0004120,1.52e-09,315;UBERON:0006603,1.52e-09,315;UBERON:0000923,9.67e-08,560;UBERON:0010316,9.67e-08,560;UBERON:0005291,9.67e-08,560;UBERON:0006598,9.67e-08,560;UBERON:0010317,9.67e-08,560;UBERON:0002532,9.67e-08,560;UBERON:0002050,1.29e-07,564;UBERON:0005423,4.25e-07,581;UBERON:0002384,7.32e-07,371;UBERON:0000922,8.89e-07,592 | |||
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| ||
|short_description=p1@KCNK13 | |||
}} | }} |
Latest revision as of 11:56, 16 September 2015
Short description: | p1@KCNK13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNK13_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 224bp_to_ENST00000282146_5end |
EntrezGene: | KCNK13 |
HGNC: | 6275 |
UniProt: | Q9HB14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.32e-58 | 76 |
bone element | 3.26e-53 | 82 |
skeletal element | 8.20e-48 | 90 |
immune system | 5.04e-46 | 93 |
hematopoietic system | 5.20e-46 | 98 |
blood island | 5.20e-46 | 98 |
skeletal system | 2.90e-42 | 100 |
hemolymphoid system | 5.07e-41 | 108 |
musculoskeletal system | 9.15e-24 | 167 |
lateral plate mesoderm | 4.98e-18 | 203 |
mesoderm | 1.52e-09 | 315 |
mesoderm-derived structure | 1.52e-09 | 315 |
presumptive mesoderm | 1.52e-09 | 315 |
germ layer | 9.67e-08 | 560 |
germ layer / neural crest | 9.67e-08 | 560 |
embryonic tissue | 9.67e-08 | 560 |
presumptive structure | 9.67e-08 | 560 |
germ layer / neural crest derived structure | 9.67e-08 | 560 |
epiblast (generic) | 9.67e-08 | 560 |
embryonic structure | 1.29e-07 | 564 |
developing anatomical structure | 4.25e-07 | 581 |
connective tissue | 7.32e-07 | 371 |
embryo | 8.89e-07 | 592 |