FFCP PHASE1:Hg19::chr4:160189108..160189117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9693 | |EntrezGene=9693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |HGNC=16854 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4G8 | |UniProt=Q9Y4G8 | ||
|association_with_transcript=110bp_to_NM_014247,uc003iqg.3_5end | |association_with_transcript=110bp_to_NM_014247,uc003iqg.3_5end | ||
|cluster_id=chr4:160189108..160189117,+ | |||
|description=CAGE_peak_44_at_RAPGEF2_5end | |description=CAGE_peak_44_at_RAPGEF2_5end | ||
|id=chr4:160189108..160189117,+ | |id=chr4:160189108..160189117,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
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|short_description=p44@RAPGEF2 | |short_description=p44@RAPGEF2 | ||
}} | }} |
Latest revision as of 12:31, 16 September 2015
Short description: | p44@RAPGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_44_at_RAPGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_NM_014247, uc003iqg.3_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | Q9Y4G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amygdala | 4.52e-50 | 2 |
limbic system | 5.15e-21 | 5 |
temporal lobe | 1.91e-15 | 6 |
basal ganglion | 2.45e-12 | 9 |
nuclear complex of neuraxis | 2.45e-12 | 9 |
aggregate regional part of brain | 2.45e-12 | 9 |
collection of basal ganglia | 2.45e-12 | 9 |
cerebral subcortex | 2.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |