FFCP PHASE1:Hg19::chr15:63414017..63414049,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:63414017..63414049,+
|short_description=p1@LACTB
|description=CAGE_peak_1_at_LACTB_5end
|association_with_transcript=0bp_to_ENST00000413507,uc002alv.2,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114294 | |EntrezGene=114294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16468 | |HGNC=16468 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000413507,uc002alv.2,uc002alw.2_5end | |||
|cluster_id=chr15:63414017..63414049,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_LACTB_5end | |||
|id=chr15:63414017..63414049,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.33e-35!76;CL:0000557!1.48e-31!71;CL:0002009!9.60e-30!65;CL:0002194!7.19e-29!63;CL:0000576!7.19e-29!63;CL:0000040!7.19e-29!63;CL:0000559!7.19e-29!63;CL:0000839!2.25e-28!70;CL:0002057!1.41e-27!42;CL:0000860!1.85e-25!45;CL:0000738!4.11e-19!140;CL:0000048!1.68e-18!430;CL:0000763!1.19e-17!112;CL:0000049!1.19e-17!112;CL:0000723!1.99e-17!436;CL:0000034!2.49e-17!444;CL:0000144!6.74e-16!625;CL:0000134!1.90e-14!358;CL:0002371!3.56e-14!591;CL:0002031!5.41e-14!124;CL:0002087!2.33e-13!119;CL:0002320!3.80e-13!365;CL:0000219!4.19e-11!390;CL:0000003!6.95e-11!722;CL:0000012!1.16e-10!682;CL:0000548!2.48e-10!679;CL:0000004!2.48e-10!679;CL:0000255!2.48e-10!679;CL:0000988!1.38e-09!182;CL:0000037!1.67e-09!172;CL:0000566!1.67e-09!172;CL:0002032!1.90e-09!165;CL:0000837!1.90e-09!165;CL:0000063!3.30e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-20;33!CL:0002057;1.28e-20;33!CL:0000473;2.67e-20;39!CL:0000234;2.67e-20;39!CL:0000576;2.83e-17;48!CL:0000766;5.60e-16;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.41e-37,72;CL:0000557,6.17e-33,67;CL:0000473,3.30e-31,48;CL:0000234,3.30e-31,48;CL:0002009,3.50e-31,61;CL:0002194,2.58e-30,59;CL:0000576,2.58e-30,59;CL:0000040,2.58e-30,59;CL:0000559,2.58e-30,59;CL:0000839,1.28e-29,66;CL:0000860,1.41e-27,42;CL:0002057,1.41e-27,42;CL:0000738,2.09e-19,136;CL:0000048,9.24e-19,427;CL:0000763,5.04e-18,108;CL:0000049,5.04e-18,108;CL:0000723,1.13e-17,433;CL:0000034,1.42e-17,441;CL:0000134,1.01e-14,354;CL:0002031,3.15e-14,120;CL:0002087,1.35e-13,115;CL:0002320,2.11e-13,361;CL:0000219,2.55e-11,386;CL:0000988,9.63e-10,177;CL:0000037,1.43e-09,168;CL:0002032,1.60e-09,161;CL:0000837,1.60e-09,161 | |||
|ontology_enrichment_development_v019=CL:0002057;4.32e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.95e-32!112;UBERON:0002390!2.42e-30!102;UBERON:0003061!2.42e-30!102;UBERON:0002371!3.66e-28!80;UBERON:0002405!1.02e-25!115;UBERON:0003081!2.28e-24!216;UBERON:0001474!8.00e-24!86;UBERON:0002204!1.25e-22!167;UBERON:0004765!8.50e-22!101;UBERON:0001434!8.50e-22!101;UBERON:0002384!3.47e-12!375;UBERON:0000926!3.55e-11!448;UBERON:0004120!3.55e-11!448;UBERON:0006603!3.55e-11!448;UBERON:0004535!1.47e-10!110;UBERON:0001009!2.53e-10!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.19e-33,108;UBERON:0002390,3.60e-31,98;UBERON:0003061,3.60e-31,98;UBERON:0002371,3.33e-29,76;UBERON:0002405,1.28e-28,93;UBERON:0003081,1.15e-27,203;UBERON:0001474,1.33e-24,82;UBERON:0004765,5.39e-23,90;UBERON:0000926,8.96e-23,315;UBERON:0004120,8.96e-23,315;UBERON:0006603,8.96e-23,315;UBERON:0002204,8.40e-22,167;UBERON:0001434,5.64e-21,100;UBERON:0002384,2.02e-12,371;UBERON:0004535,2.46e-10,109;UBERON:0001009,4.20e-10,112 | |||
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| ||
|short_description=p1@LACTB | |||
}} | }} |
Latest revision as of 12:03, 18 September 2015
Short description: | p1@LACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LACTB_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000413507, uc002alv.2, uc002alw.2_5end |
EntrezGene: | LACTB |
HGNC: | 16468 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.41e-37 | 72 |
granulocyte monocyte progenitor cell | 6.17e-33 | 67 |
defensive cell | 3.30e-31 | 48 |
phagocyte | 3.30e-31 | 48 |
macrophage dendritic cell progenitor | 3.50e-31 | 61 |
monopoietic cell | 2.58e-30 | 59 |
monocyte | 2.58e-30 | 59 |
monoblast | 2.58e-30 | 59 |
promonocyte | 2.58e-30 | 59 |
myeloid lineage restricted progenitor cell | 1.28e-29 | 66 |
classical monocyte | 1.41e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-27 | 42 |
leukocyte | 2.09e-19 | 136 |
multi fate stem cell | 9.24e-19 | 427 |
myeloid cell | 5.04e-18 | 108 |
common myeloid progenitor | 5.04e-18 | 108 |
somatic stem cell | 1.13e-17 | 433 |
stem cell | 1.42e-17 | 441 |
mesenchymal cell | 1.01e-14 | 354 |
hematopoietic lineage restricted progenitor cell | 3.15e-14 | 120 |
nongranular leukocyte | 1.35e-13 | 115 |
connective tissue cell | 2.11e-13 | 361 |
motile cell | 2.55e-11 | 386 |
hematopoietic cell | 9.63e-10 | 177 |
hematopoietic stem cell | 1.43e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.60e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.19e-33 | 108 |
hematopoietic system | 3.60e-31 | 98 |
blood island | 3.60e-31 | 98 |
bone marrow | 3.33e-29 | 76 |
immune system | 1.28e-28 | 93 |
lateral plate mesoderm | 1.15e-27 | 203 |
bone element | 1.33e-24 | 82 |
skeletal element | 5.39e-23 | 90 |
mesoderm | 8.96e-23 | 315 |
mesoderm-derived structure | 8.96e-23 | 315 |
presumptive mesoderm | 8.96e-23 | 315 |
musculoskeletal system | 8.40e-22 | 167 |
skeletal system | 5.64e-21 | 100 |
connective tissue | 2.02e-12 | 371 |
cardiovascular system | 2.46e-10 | 109 |
circulatory system | 4.20e-10 | 112 |