FFCP PHASE1:Hg19::chr6:30654401..30654477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AL832742_5end | |association_with_transcript=0bp_to_AL832742_5end | ||
|cluster_id=chr6:30654401..30654477,- | |||
|coexpression_cluster_id=C4590 | |||
|description=CAGE_peak_1_at_PPP1R18_5end | |description=CAGE_peak_1_at_PPP1R18_5end | ||
|id=chr6:30654401..30654477,- | |id=chr6:30654401..30654477,- | ||
|ontology_enrichment_celltype=CL:0002371!4.13e-22!591;CL:0000144!7.78e-17!625;CL:0002057!1.69e-15!42;CL:0000003!2.83e-14!722;CL:0000766!2.44e-13!76;CL:0000860!5.79e-13!45;CL:0000222!4.64e-12!119;CL:0000723!7.81e-12!436;CL:0000048!1.09e-11!430;CL:0000115!3.12e-11!35;CL:0000548!1.07e-10!679;CL:0000004!1.07e-10!679;CL:0000255!1.07e-10!679;CL:0000738!1.07e-10!140;CL:0002194!1.45e-10!63;CL:0000576!1.45e-10!63;CL:0000040!1.45e-10!63;CL:0000559!1.45e-10!63;CL:0002009!1.61e-10!65;CL:0000012!3.17e-10!682;CL:0000034!3.39e-10!444;CL:0000557!9.89e-10!71;CL:0002139!3.78e-09!24;CL:0002078!4.15e-09!44;CL:0000839!5.98e-09!70;CL:0002087!8.25e-09!119;CL:0000359!3.45e-08!32;CL:0000071!5.06e-08!18;CL:0002546!5.06e-08!18;CL:0002320!1.17e-07!365;CL:0002031!1.47e-07!124;CL:0000192!1.64e-07!42;CL:0000514!1.64e-07!42;CL:0000134!1.90e-07!358;CL:0000063!2.29e-07!578;CL:0000213!2.96e-07!57;CL:0000215!2.96e-07!57;CL:0000183!9.60e-07!59 | |ontology_enrichment_celltype=CL:0002371!4.13e-22!591;CL:0000144!7.78e-17!625;CL:0002057!1.69e-15!42;CL:0000003!2.83e-14!722;CL:0000766!2.44e-13!76;CL:0000860!5.79e-13!45;CL:0000222!4.64e-12!119;CL:0000723!7.81e-12!436;CL:0000048!1.09e-11!430;CL:0000115!3.12e-11!35;CL:0000548!1.07e-10!679;CL:0000004!1.07e-10!679;CL:0000255!1.07e-10!679;CL:0000738!1.07e-10!140;CL:0002194!1.45e-10!63;CL:0000576!1.45e-10!63;CL:0000040!1.45e-10!63;CL:0000559!1.45e-10!63;CL:0002009!1.61e-10!65;CL:0000012!3.17e-10!682;CL:0000034!3.39e-10!444;CL:0000557!9.89e-10!71;CL:0002139!3.78e-09!24;CL:0002078!4.15e-09!44;CL:0000839!5.98e-09!70;CL:0002087!8.25e-09!119;CL:0000359!3.45e-08!32;CL:0000071!5.06e-08!18;CL:0002546!5.06e-08!18;CL:0002320!1.17e-07!365;CL:0002031!1.47e-07!124;CL:0000192!1.64e-07!42;CL:0000514!1.64e-07!42;CL:0000134!1.90e-07!358;CL:0000063!2.29e-07!578;CL:0000213!2.96e-07!57;CL:0000215!2.96e-07!57;CL:0000183!9.60e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.79e-16;33!CL:0002057;4.79e-16;33!CL:0000473;7.45e-13;39!CL:0000234;7.45e-13;39!CL:0000115;7.30e-10;36!CL:0002139;3.66e-09;24!CL:0000576;1.75e-08;48!CL:0000071;4.97e-08;18!CL:0000359;6.52e-08;32!CL:0000766;3.85e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.69e-15,42;CL:0002057,1.69e-15,42;CL:0000473,7.79e-15,48;CL:0000234,7.79e-15,48;CL:0000766,1.02e-14,72;CL:0000222,1.79e-12,121;CL:0000723,2.27e-12,433;CL:0000048,3.17e-12,427;CL:0002194,6.93e-12,59;CL:0000576,6.93e-12,59;CL:0000040,6.93e-12,59;CL:0000559,6.93e-12,59;CL:0002009,8.35e-12,61;CL:0000115,1.27e-11,36;CL:0000738,1.93e-11,136;CL:0000557,7.37e-11,67;CL:0000034,1.09e-10,441;CL:0000839,5.14e-10,66;CL:0002087,1.57e-09,115;CL:0002078,1.82e-09,45;CL:0002139,3.78e-09,24;CL:0000359,3.45e-08,32;CL:0002031,3.51e-08,120;CL:0000071,5.06e-08,18;CL:0002546,5.06e-08,18;CL:0002320,5.22e-08,361;CL:0000134,8.55e-08,354;CL:0000192,1.37e-07,43;CL:0000514,1.37e-07,43;CL:0000213,1.45e-07,58;CL:0000215,1.45e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-11;42!CL:0002546;4.97e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.86e-28!216;UBERON:0004535!2.22e-20!110;UBERON:0001009!3.71e-19!113;UBERON:0000055!2.48e-18!69;UBERON:0002049!6.22e-17!79;UBERON:0007798!6.22e-17!79;UBERON:0001981!2.36e-16!60;UBERON:0007500!2.36e-16!60;UBERON:0004537!2.36e-16!60;UBERON:0006965!2.36e-16!60;UBERON:0002193!4.55e-16!112;UBERON:0004872!5.65e-14!84;UBERON:0002390!2.29e-13!102;UBERON:0003061!2.29e-13!102;UBERON:0001637!4.84e-13!42;UBERON:0003509!4.84e-13!42;UBERON:0004572!4.84e-13!42;UBERON:0002204!5.61e-12!167;UBERON:0004573!3.68e-10!33;UBERON:0004571!3.68e-10!33;UBERON:0002371!1.29e-09!80;UBERON:0003914!8.92e-09!118;UBERON:0001474!1.07e-08!86;UBERON:0000926!1.76e-08!448;UBERON:0004120!1.76e-08!448;UBERON:0006603!1.76e-08!448;UBERON:0004765!2.46e-08!101;UBERON:0001434!2.46e-08!101;UBERON:0002405!4.23e-08!115;UBERON:0001986!5.06e-08!18;UBERON:0004638!5.06e-08!18;UBERON:0004852!5.06e-08!18;UBERON:0002384!6.61e-08!375 | |ontology_enrichment_uberon=UBERON:0003081!1.86e-28!216;UBERON:0004535!2.22e-20!110;UBERON:0001009!3.71e-19!113;UBERON:0000055!2.48e-18!69;UBERON:0002049!6.22e-17!79;UBERON:0007798!6.22e-17!79;UBERON:0001981!2.36e-16!60;UBERON:0007500!2.36e-16!60;UBERON:0004537!2.36e-16!60;UBERON:0006965!2.36e-16!60;UBERON:0002193!4.55e-16!112;UBERON:0004872!5.65e-14!84;UBERON:0002390!2.29e-13!102;UBERON:0003061!2.29e-13!102;UBERON:0001637!4.84e-13!42;UBERON:0003509!4.84e-13!42;UBERON:0004572!4.84e-13!42;UBERON:0002204!5.61e-12!167;UBERON:0004573!3.68e-10!33;UBERON:0004571!3.68e-10!33;UBERON:0002371!1.29e-09!80;UBERON:0003914!8.92e-09!118;UBERON:0001474!1.07e-08!86;UBERON:0000926!1.76e-08!448;UBERON:0004120!1.76e-08!448;UBERON:0006603!1.76e-08!448;UBERON:0004765!2.46e-08!101;UBERON:0001434!2.46e-08!101;UBERON:0002405!4.23e-08!115;UBERON:0001986!5.06e-08!18;UBERON:0004638!5.06e-08!18;UBERON:0004852!5.06e-08!18;UBERON:0002384!6.61e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.38e-10;42!UBERON:0003509;9.38e-10;42!UBERON:0004572;9.38e-10;42!UBERON:0004573;2.16e-09;33!UBERON:0004571;2.16e-09;33!UBERON:0000055;2.59e-09;65!UBERON:0007500;2.81e-09;56!UBERON:0001981;2.81e-09;56!UBERON:0004537;2.81e-09;56!UBERON:0004638;4.97e-08;18!UBERON:0001986;4.97e-08;18!UBERON:0004852;4.97e-08;18!UBERON:0003914;6.92e-08;74!UBERON:0002049;2.82e-07;75!UBERON:0007798;2.82e-07;75 | |||
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| ||
|short_description=p1@PPP1R18 | |short_description=p1@PPP1R18 | ||
}} | }} |
Latest revision as of 17:45, 17 September 2015
Short description: | p1@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP1R18_5end |
Coexpression cluster: | C4590_Neutrophils_Eosinophils_Whole_embryonic_osteosarcoma_Fibroblast_CD14 |
Association with transcript: | 0bp_to_AL832742_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.07e-28 | 203 |
cardiovascular system | 5.80e-20 | 109 |
circulatory system | 9.44e-19 | 112 |
mesoderm | 9.52e-19 | 315 |
mesoderm-derived structure | 9.52e-19 | 315 |
presumptive mesoderm | 9.52e-19 | 315 |
vessel | 6.74e-18 | 68 |
hemolymphoid system | 2.98e-17 | 108 |
vasculature | 1.62e-16 | 78 |
vascular system | 1.62e-16 | 78 |
epithelial tube open at both ends | 6.34e-16 | 59 |
blood vessel | 6.34e-16 | 59 |
blood vasculature | 6.34e-16 | 59 |
vascular cord | 6.34e-16 | 59 |
hematopoietic system | 1.81e-14 | 98 |
blood island | 1.81e-14 | 98 |
splanchnic layer of lateral plate mesoderm | 1.37e-13 | 83 |
artery | 4.84e-13 | 42 |
arterial blood vessel | 4.84e-13 | 42 |
arterial system | 4.84e-13 | 42 |
immune system | 4.85e-13 | 93 |
musculoskeletal system | 1.18e-12 | 167 |
bone marrow | 1.22e-10 | 76 |
systemic artery | 3.68e-10 | 33 |
systemic arterial system | 3.68e-10 | 33 |
bone element | 1.36e-09 | 82 |
skeletal element | 1.62e-09 | 90 |
skeletal system | 6.39e-09 | 100 |
epithelial tube | 1.10e-08 | 117 |
connective tissue | 2.93e-08 | 371 |
blood vessel endothelium | 5.06e-08 | 18 |
endothelium | 5.06e-08 | 18 |
cardiovascular system endothelium | 5.06e-08 | 18 |
epithelial vesicle | 9.74e-07 | 78 |