FFCP PHASE1:Hg19::chr6:32411178..32411194,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3117 | |EntrezGene=3117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4942 | |HGNC=4942 | ||
|TSSclassifier=strong | |||
|UniProt=Q7YPT8 | |UniProt=Q7YPT8 | ||
|association_with_transcript=217bp_to_AF522250_5end | |association_with_transcript=217bp_to_AF522250_5end | ||
|cluster_id=chr6:32411178..32411194,+ | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_6_at_HLA-DQA1_5end | |description=CAGE_peak_6_at_HLA-DQA1_5end | ||
|id=chr6:32411178..32411194,+ | |id=chr6:32411178..32411194,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.95e-58!140;CL:0002087!1.39e-57!119;CL:0000037!5.84e-55!172;CL:0000566!5.84e-55!172;CL:0002009!1.21e-54!65;CL:0002031!2.54e-53!124;CL:0002032!5.52e-53!165;CL:0000837!5.52e-53!165;CL:0002194!6.56e-52!63;CL:0000576!6.56e-52!63;CL:0000040!6.56e-52!63;CL:0000559!6.56e-52!63;CL:0002057!1.76e-51!42;CL:0000988!3.70e-51!182;CL:0000557!2.99e-48!71;CL:0000860!6.60e-47!45;CL:0000839!1.06e-44!70;CL:0000766!4.28e-43!76;CL:0000763!2.62e-42!112;CL:0000049!2.62e-42!112;CL:0000945!9.41e-22!24;CL:0000826!9.41e-22!24;CL:0000236!2.36e-14!14;CL:0000990!6.51e-13!8;CL:0000451!2.25e-12!10;CL:0002393!2.58e-11!9;CL:0002397!2.58e-11!9;CL:0000134!9.01e-11!358;CL:0002320!4.68e-10!365;CL:0000542!7.87e-10!53;CL:0000051!7.87e-10!53;CL:0000838!2.30e-09!52;CL:0000840!4.94e-09!5;CL:0001029!4.94e-09!5;CL:0000453!3.37e-08!5;CL:0000219!1.27e-07!390 | |ontology_enrichment_celltype=CL:0000738!6.95e-58!140;CL:0002087!1.39e-57!119;CL:0000037!5.84e-55!172;CL:0000566!5.84e-55!172;CL:0002009!1.21e-54!65;CL:0002031!2.54e-53!124;CL:0002032!5.52e-53!165;CL:0000837!5.52e-53!165;CL:0002194!6.56e-52!63;CL:0000576!6.56e-52!63;CL:0000040!6.56e-52!63;CL:0000559!6.56e-52!63;CL:0002057!1.76e-51!42;CL:0000988!3.70e-51!182;CL:0000557!2.99e-48!71;CL:0000860!6.60e-47!45;CL:0000839!1.06e-44!70;CL:0000766!4.28e-43!76;CL:0000763!2.62e-42!112;CL:0000049!2.62e-42!112;CL:0000945!9.41e-22!24;CL:0000826!9.41e-22!24;CL:0000236!2.36e-14!14;CL:0000990!6.51e-13!8;CL:0000451!2.25e-12!10;CL:0002393!2.58e-11!9;CL:0002397!2.58e-11!9;CL:0000134!9.01e-11!358;CL:0002320!4.68e-10!365;CL:0000542!7.87e-10!53;CL:0000051!7.87e-10!53;CL:0000838!2.30e-09!52;CL:0000840!4.94e-09!5;CL:0001029!4.94e-09!5;CL:0000453!3.37e-08!5;CL:0000219!1.27e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-75;33!CL:0002057;1.29e-75;33!CL:0000473;2.56e-70;39!CL:0000234;2.56e-70;39!CL:0000576;8.34e-53;48!CL:0000766;1.28e-36;69!CL:0000990;9.00e-25;8!CL:0000451;3.75e-24;10!CL:0000236;3.07e-22;13!CL:0000738;5.06e-21;136!CL:0002087;7.55e-21;104!CL:0000840;9.39e-17;5!CL:0000763;3.99e-16;100!CL:0000945;2.86e-15;24!CL:0000453;3.78e-15;5!CL:0000988;9.51e-12;177!CL:0000235;2.20e-11;6!CL:0002393;4.16e-11;6!CL:0002397;4.16e-11;6!CL:0000219;9.50e-10;193!CL:0000875;3.34e-08;3!CL:0002396;3.34e-08;3!CL:0001014;4.27e-07;2!CL:0001016;4.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.07e-110,48;CL:0000234,3.07e-110,48;CL:0002009,1.77e-108,61;CL:0002194,8.10e-103,59;CL:0000576,8.10e-103,59;CL:0000040,8.10e-103,59;CL:0000559,8.10e-103,59;CL:0000860,8.38e-100,42;CL:0002057,8.38e-100,42;CL:0000557,1.11e-97,67;CL:0000839,1.16e-90,66;CL:0000738,2.46e-83,136;CL:0000766,4.25e-82,72;CL:0002087,8.54e-82,115;CL:0002031,3.25e-81,120;CL:0000037,1.14e-66,168;CL:0000763,2.06e-66,108;CL:0000049,2.06e-66,108;CL:0002032,7.95e-66,161;CL:0000837,7.95e-66,161;CL:0000988,1.73e-62,177;CL:0000990,9.17e-25,8;CL:0000236,2.95e-24,14;CL:0000451,3.29e-24,10;CL:0000134,2.75e-23,354;CL:0002320,1.60e-22,361;CL:0000219,7.84e-20,386;CL:0002393,1.72e-17,9;CL:0002397,1.72e-17,9;CL:0000840,7.99e-17,5;CL:0001029,7.99e-17,5;CL:0000048,1.53e-16,427;CL:0000034,2.83e-16,441;CL:0000723,4.36e-16,433;CL:0000945,2.92e-15,24;CL:0000826,2.92e-15,24;CL:0000453,4.01e-15,5;CL:0000235,1.73e-11,6;CL:0000875,2.72e-08,3;CL:0002396,2.72e-08,3;CL:0001014,3.76e-07,2;CL:0001016,3.76e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-71;42!CL:0000049;8.32e-20;108 | |||
|ontology_enrichment_disease=DOID:0060058!1.88e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.34e-46!102;UBERON:0003061!6.34e-46!102;UBERON:0002371!1.85e-43!80;UBERON:0002193!6.71e-41!112;UBERON:0001474!6.03e-39!86;UBERON:0004765!3.59e-31!101;UBERON:0001434!3.59e-31!101;UBERON:0002405!4.36e-30!115;UBERON:0003081!5.46e-14!216;UBERON:0002204!1.32e-12!167;UBERON:0007023!5.11e-11!115;UBERON:0002384!4.27e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!6.34e-46!102;UBERON:0003061!6.34e-46!102;UBERON:0002371!1.85e-43!80;UBERON:0002193!6.71e-41!112;UBERON:0001474!6.03e-39!86;UBERON:0004765!3.59e-31!101;UBERON:0001434!3.59e-31!101;UBERON:0002405!4.36e-30!115;UBERON:0003081!5.46e-14!216;UBERON:0002204!1.32e-12!167;UBERON:0007023!5.11e-11!115;UBERON:0002384!4.27e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-84,76;UBERON:0001474,1.62e-77,82;UBERON:0004765,1.76e-69,90;UBERON:0002405,8.03e-67,93;UBERON:0002390,2.37e-65,98;UBERON:0003061,2.37e-65,98;UBERON:0001434,3.13e-61,100;UBERON:0002193,4.53e-58,108;UBERON:0002204,2.47e-31,167;UBERON:0003081,8.29e-26,203;UBERON:0002384,1.76e-21,371;UBERON:0000926,6.99e-12,315;UBERON:0004120,6.99e-12,315;UBERON:0006603,6.99e-12,315 | |||
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|short_description=p6@HLA-DQA1 | |short_description=p6@HLA-DQA1 | ||
}} | }} |
Latest revision as of 02:57, 18 September 2015
Short description: | p6@HLA-DQA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HLA-DQA1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 217bp_to_AF522250_5end |
EntrezGene: | HLA-DQA1 |
HGNC: | 4942 |
UniProt: | Q7YPT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-84 | 76 |
bone element | 1.62e-77 | 82 |
skeletal element | 1.76e-69 | 90 |
immune system | 8.03e-67 | 93 |
hematopoietic system | 2.37e-65 | 98 |
blood island | 2.37e-65 | 98 |
skeletal system | 3.13e-61 | 100 |
hemolymphoid system | 4.53e-58 | 108 |
musculoskeletal system | 2.47e-31 | 167 |
lateral plate mesoderm | 8.29e-26 | 203 |
connective tissue | 1.76e-21 | 371 |
mesoderm | 6.99e-12 | 315 |
mesoderm-derived structure | 6.99e-12 | 315 |
presumptive mesoderm | 6.99e-12 | 315 |