FFCP PHASE1:Hg19::chr7:93518340..93518370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93518340..93518370,+ | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93518340..93518370,+ | |description=CAGE_peak_at_chr7:93518340..93518370,+ | ||
|id=chr7:93518340..93518370,+ | |id=chr7:93518340..93518370,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.07e-24!42;CL:0000514!1.07e-24!42;CL:0000680!2.01e-24!57;CL:0000056!2.01e-24!57;CL:0000355!2.01e-24!57;CL:0000187!7.32e-24!54;CL:0000393!2.06e-22!60;CL:0000211!2.06e-22!60;CL:0000183!9.42e-22!59;CL:0000359!1.86e-21!32;CL:0000222!7.98e-18!119;CL:0000055!2.51e-15!180;CL:0000548!7.31e-10!679;CL:0000004!7.31e-10!679;CL:0000255!7.31e-10!679;CL:0000012!1.32e-09!682;CL:0000220!2.92e-09!246;CL:0002321!5.09e-09!248;CL:0002494!1.25e-08!16;CL:0000144!5.87e-08!625;CL:0002371!7.13e-08!591;CL:0002595!1.15e-07!5;CL:0000048!3.61e-07!430;CL:0000723!5.00e-07!436 | |ontology_enrichment_celltype=CL:0000192!1.07e-24!42;CL:0000514!1.07e-24!42;CL:0000680!2.01e-24!57;CL:0000056!2.01e-24!57;CL:0000355!2.01e-24!57;CL:0000187!7.32e-24!54;CL:0000393!2.06e-22!60;CL:0000211!2.06e-22!60;CL:0000183!9.42e-22!59;CL:0000359!1.86e-21!32;CL:0000222!7.98e-18!119;CL:0000055!2.51e-15!180;CL:0000548!7.31e-10!679;CL:0000004!7.31e-10!679;CL:0000255!7.31e-10!679;CL:0000012!1.32e-09!682;CL:0000220!2.92e-09!246;CL:0002321!5.09e-09!248;CL:0002494!1.25e-08!16;CL:0000144!5.87e-08!625;CL:0002371!7.13e-08!591;CL:0002595!1.15e-07!5;CL:0000048!3.61e-07!430;CL:0000723!5.00e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.86e-27;32!CL:0000192;4.58e-21;43!CL:0002595;1.01e-15;5!CL:0000187;3.00e-12;55!CL:0000393;7.97e-11;61!CL:0000211;7.97e-11;61!CL:0002494;1.97e-10;16!CL:0002592;3.86e-09;3!CL:0002593;1.84e-07;2!CL:0002594;4.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.46e-30,43;CL:0000514,5.46e-30,43;CL:0000359,1.52e-28,32;CL:0000187,4.20e-24,55;CL:0000680,1.64e-22,58;CL:0000056,1.64e-22,58;CL:0000355,1.64e-22,58;CL:0000393,4.46e-21,61;CL:0000211,4.46e-21,61;CL:0002595,9.78e-16,5;CL:0002494,1.69e-10,16;CL:0000222,3.00e-10,121;CL:0002592,2.69e-09,3;CL:0002593,1.82e-07,2;CL:0002594,4.00e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;4.58e-21;43!CL:0000355;1.85e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!2.23e-13!14;DOID:120!1.90e-10!27;DOID:193!2.49e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.40e-18;14!DOID:0060072;2.64e-12;4!DOID:120;1.25e-10;27!DOID:0060084;4.61e-10;3!DOID:127;4.61e-10;3!DOID:193;9.92e-10;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.07e-18,14;DOID:0060072,1.88e-12,4;DOID:120,1.09e-10,27;DOID:0060084,4.57e-10,3;DOID:127,4.57e-10,3;DOID:193,8.77e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.31e-22!82;UBERON:0001134!7.55e-22!61;UBERON:0002036!7.55e-22!61;UBERON:0003082!7.55e-22!61;UBERON:0004290!8.49e-22!70;UBERON:0000914!3.60e-21!83;UBERON:0002329!3.60e-21!83;UBERON:0003077!3.60e-21!83;UBERON:0003059!3.60e-21!83;UBERON:0007282!3.60e-21!83;UBERON:0009618!3.60e-21!83;UBERON:0007285!3.60e-21!83;UBERON:0002385!1.08e-20!63;UBERON:0001015!1.08e-20!63;UBERON:0000383!1.08e-20!63;UBERON:0004872!2.10e-19!84;UBERON:0001637!4.71e-19!42;UBERON:0003509!4.71e-19!42;UBERON:0004572!4.71e-19!42;UBERON:0005256!6.91e-18!143;UBERON:0000490!7.21e-18!138;UBERON:0001981!2.29e-16!60;UBERON:0007500!2.29e-16!60;UBERON:0004537!2.29e-16!60;UBERON:0006965!2.29e-16!60;UBERON:0002049!2.49e-16!79;UBERON:0007798!2.49e-16!79;UBERON:0000055!3.40e-16!69;UBERON:0004535!1.32e-14!110;UBERON:0004573!3.42e-14!33;UBERON:0004571!3.42e-14!33;UBERON:0002100!6.46e-14!216;UBERON:0001009!8.77e-14!113;UBERON:0003914!2.53e-13!118;UBERON:0000119!5.68e-11!312;UBERON:0000483!1.66e-10!309;UBERON:0003513!2.05e-10!8;UBERON:0003104!2.42e-10!238;UBERON:0009142!2.42e-10!238;UBERON:0000481!2.98e-08!347;UBERON:0000926!6.88e-08!448;UBERON:0004120!6.88e-08!448;UBERON:0006603!6.88e-08!448;UBERON:0003834!1.15e-07!5;UBERON:0001533!1.15e-07!5;UBERON:0003498!3.92e-07!5;UBERON:0005985!3.92e-07!5;UBERON:0000992!4.50e-07!13;UBERON:0000948!6.83e-07!24;UBERON:0005498!6.83e-07!24;UBERON:0004140!6.83e-07!24;UBERON:0009881!6.83e-07!24;UBERON:0004141!6.83e-07!24;UBERON:0003084!6.83e-07!24;UBERON:0007005!6.83e-07!24;UBERON:0004139!6.83e-07!24;UBERON:0004291!6.83e-07!24;UBERON:0000477!8.04e-07!286 | |ontology_enrichment_uberon=UBERON:0000486!4.31e-22!82;UBERON:0001134!7.55e-22!61;UBERON:0002036!7.55e-22!61;UBERON:0003082!7.55e-22!61;UBERON:0004290!8.49e-22!70;UBERON:0000914!3.60e-21!83;UBERON:0002329!3.60e-21!83;UBERON:0003077!3.60e-21!83;UBERON:0003059!3.60e-21!83;UBERON:0007282!3.60e-21!83;UBERON:0009618!3.60e-21!83;UBERON:0007285!3.60e-21!83;UBERON:0002385!1.08e-20!63;UBERON:0001015!1.08e-20!63;UBERON:0000383!1.08e-20!63;UBERON:0004872!2.10e-19!84;UBERON:0001637!4.71e-19!42;UBERON:0003509!4.71e-19!42;UBERON:0004572!4.71e-19!42;UBERON:0005256!6.91e-18!143;UBERON:0000490!7.21e-18!138;UBERON:0001981!2.29e-16!60;UBERON:0007500!2.29e-16!60;UBERON:0004537!2.29e-16!60;UBERON:0006965!2.29e-16!60;UBERON:0002049!2.49e-16!79;UBERON:0007798!2.49e-16!79;UBERON:0000055!3.40e-16!69;UBERON:0004535!1.32e-14!110;UBERON:0004573!3.42e-14!33;UBERON:0004571!3.42e-14!33;UBERON:0002100!6.46e-14!216;UBERON:0001009!8.77e-14!113;UBERON:0003914!2.53e-13!118;UBERON:0000119!5.68e-11!312;UBERON:0000483!1.66e-10!309;UBERON:0003513!2.05e-10!8;UBERON:0003104!2.42e-10!238;UBERON:0009142!2.42e-10!238;UBERON:0000481!2.98e-08!347;UBERON:0000926!6.88e-08!448;UBERON:0004120!6.88e-08!448;UBERON:0006603!6.88e-08!448;UBERON:0003834!1.15e-07!5;UBERON:0001533!1.15e-07!5;UBERON:0003498!3.92e-07!5;UBERON:0005985!3.92e-07!5;UBERON:0000992!4.50e-07!13;UBERON:0000948!6.83e-07!24;UBERON:0005498!6.83e-07!24;UBERON:0004140!6.83e-07!24;UBERON:0009881!6.83e-07!24;UBERON:0004141!6.83e-07!24;UBERON:0003084!6.83e-07!24;UBERON:0007005!6.83e-07!24;UBERON:0004139!6.83e-07!24;UBERON:0004291!6.83e-07!24;UBERON:0000477!8.04e-07!286 | ||
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| ||
|short_description=p@chr7:93518340..93518370,+ | |short_description=p@chr7:93518340..93518370,+ | ||
}} | }} |
Latest revision as of 12:36, 31 July 2015
Short description: | p@chr7:93518340..93518370, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518340..93518370, + |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.46e-30 | 43 |
smooth muscle myoblast | 5.46e-30 | 43 |
vascular associated smooth muscle cell | 1.52e-28 | 32 |
muscle cell | 4.20e-24 | 55 |
muscle precursor cell | 1.64e-22 | 58 |
myoblast | 1.64e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-22 | 58 |
electrically responsive cell | 4.46e-21 | 61 |
electrically active cell | 4.46e-21 | 61 |
smooth muscle cell of the subclavian artery | 9.78e-16 | 5 |
cardiocyte | 1.69e-10 | 16 |
mesodermal cell | 3.00e-10 | 121 |
smooth muscle cell of the coronary artery | 2.69e-09 | 3 |
smooth muscle cell of the internal thoracic artery | 1.82e-07 | 2 |
smooth muscle cell of the umbilical artery | 4.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.07e-18 | 14 |