FFCP PHASE1:Hg19::chr16:84875618..84875659,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:84875618..84875659,+
|short_description=p@chr16:84875618..84875659,+
|description=CAGE_peak_at_chr16:84875618..84875659,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:84875618..84875659,+ | |||
|description=CAGE_peak_at_chr16:84875618..84875659,+ | |||
|id=chr16:84875618..84875659,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.19e-15!254;CL:0002076!1.99e-11!43;CL:0000223!1.58e-08!59;CL:0002322!2.01e-08!5;CL:0000039!3.98e-08!7;CL:0000586!3.98e-08!7;CL:0002251!2.18e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.26e-13;19!CL:0002322;2.13e-13;5!CL:0002535;4.71e-09;2!CL:0000540;3.57e-07;6!CL:0000404;3.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.08e-15,253;CL:0000082,1.19e-13,19;CL:0002322,2.17e-13,5;CL:0002535,9.13e-09,2;CL:0000540,3.25e-07,6;CL:0000031,3.25e-07,6;CL:0000404,3.25e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.83e-08;29!UBERON:0001041;3.87e-08;30!CL:0000031;3.57e-07;6 | |||
|ontology_enrichment_disease=DOID:305!3.82e-22!106;DOID:0050687!4.63e-16!143;DOID:1749!1.97e-11!14;DOID:299!7.19e-10!25;DOID:0050615!2.01e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.42e-20;16!DOID:1324;1.28e-17;15!DOID:299;3.21e-15;25!DOID:305;1.96e-14;106!DOID:5093;7.97e-11;4!DOID:1612;7.97e-11;4!DOID:1325;2.14e-10;7!DOID:3904;2.14e-10;7!DOID:1749;3.70e-10;14!DOID:3493;2.26e-09;2!DOID:3905;5.98e-08;9!DOID:3119;4.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-31,106;DOID:0050687,4.23e-25,143;DOID:0050615,1.23e-20,16;DOID:1324,1.19e-17,15;DOID:299,2.77e-15,25;DOID:162,2.80e-14,235;DOID:14566,8.07e-14,239;DOID:0050686,5.80e-12,137;DOID:5093,8.53e-11,4;DOID:1612,8.53e-11,4;DOID:1325,2.20e-10,7;DOID:3904,2.20e-10,7;DOID:1749,3.97e-10,14;DOID:3493,2.13e-09,2;DOID:3905,5.83e-08,9;DOID:3119,5.54e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.87e-13!169;UBERON:0000925!1.87e-13!169;UBERON:0006595!1.87e-13!169;UBERON:0001007!3.30e-11!155;UBERON:0001555!3.30e-11!155;UBERON:0007026!3.30e-11!155;UBERON:0000344!1.85e-10!12;UBERON:0005911!7.55e-09!82;UBERON:0004921!3.51e-08!129;UBERON:0004185!3.51e-08!129;UBERON:0000077!4.70e-08!130;UBERON:0000464!6.86e-08!104;UBERON:0001004!9.71e-08!72;UBERON:0000974!1.25e-07!10;UBERON:0005178!1.84e-07!34;UBERON:0002224!1.84e-07!34;UBERON:0000065!3.00e-07!53;UBERON:0005181!3.94e-07!35;UBERON:0005153!5.66e-07!37;UBERON:0005156!5.91e-07!59;UBERON:0000990!5.91e-07!59;UBERON:0003729!9.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.26e-13;19!UBERON:0000115;1.26e-13;19!UBERON:0005911;3.14e-12;36!UBERON:0002048;1.39e-11;22!UBERON:0004807;1.39e-11;22!UBERON:0000117;1.39e-11;22!UBERON:0000171;1.39e-11;22!UBERON:0000170;1.39e-11;22!UBERON:0006955;4.71e-09;2!UBERON:0004801;4.71e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.19e-13,19;UBERON:0000115,1.19e-13,19;UBERON:0002048,1.33e-11,22;UBERON:0000117,1.33e-11,22;UBERON:0000171,1.33e-11,22;UBERON:0000170,1.33e-11,22;UBERON:0005597,1.33e-11,22;UBERON:0000118,1.33e-11,22;UBERON:0005153,6.50e-10,37;UBERON:0004807,7.88e-09,28;UBERON:0006955,9.13e-09,2;UBERON:0004801,9.13e-09,2;UBERON:0005911,1.80e-08,82;UBERON:0000915,4.47e-08,52;UBERON:0005157,2.12e-07,47;UBERON:0005178,4.85e-07,34;UBERON:0002224,4.85e-07,34;UBERON:0005181,8.39e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0.286804595389004,1.46368447355514,1.72288698817931,1.51052125730374,0.725627385107593,2.01856680700503,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18160691046586,0,0,0,0.502644862058154,0.277765335475589,0,0,0,0,0,0,0,0,6.3216351836742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0.23874448473769,1.18785872333055,0,0,0,0,0,1.68900326502395,0,0.828851746593443,1.25966373927138,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,2.08342208868187,4.19807999981739,0,0.796554137998498,5.33932665614809,2.36387681767936,0,0,0,0,0.60298219312704,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0.922255617552241,0.628303510868405,1.95565269459615,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.816164040795739,1.41353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,1.76098157038881,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.867798691675654,0,1.04471047896483,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0,3.12882212375685,0.0801588202515337,0.640358984218058,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,2.41129722697529,4.12618309791701,2.9080823662043,0,0,0,0,0.236417121897595,0.367182116944987,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,4.22889013390003,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,2.8984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0.366857197043358,0.577628330751691,0,0,0.198916222116275,0,0,0,1.83334686136996,0,1.47856086217045,0,0,0,0,1.09394961803644,0,0.992422356778588,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0.556157009460346,0.627944742804112,0.471346769748006,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7492824225286,0,0,3.24380752213598,2.0611549059201,1.70685094975177,0,0,0,0,0.233939463462106,1.19370465096821,0,2.2589216407792,0,3.47214540203349,0.385870790539723,0,0.940634592723046,0.245148321753905,5.4205605833374,0,0,0,0,0,0,0,3.03541695629618,0,2.88868920081006,0,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,1.93778776509765,0.801652215796681,2.57305718697566,0,0,0,0,0.103432995861895,0.426467963801962,0.714193294391221,0.129177819672012,0.434523000071005,0,0.445530107947154,2.02117188958219,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,4.4771797736036,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0.286804595389004,1.46368447355514,1.72288698817931,1.51052125730374,0.725627385107593,2.01856680700503,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18160691046586,0,0,0,0.502644862058154,0.277765335475589,0,0,0,0,0,0,0,0,6.3216351836742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0.23874448473769,1.18785872333055,0,0,0,0,0,1.68900326502395,0,0.828851746593443,1.25966373927138,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,2.08342208868187,4.19807999981739,0,0.796554137998498,5.33932665614809,2.36387681767936,0,0,0,0,0.60298219312704,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0.922255617552241,0.628303510868405,1.95565269459615,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.816164040795739,1.41353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,1.76098157038881,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.867798691675654,0,1.04471047896483,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0,3.12882212375685,0.0801588202515337,0.640358984218058,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,2.41129722697529,4.12618309791701,2.9080823662043,0,0,0,0,0.236417121897595,0.367182116944987,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,4.22889013390003,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,2.8984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0.366857197043358,0.577628330751691,0,0,0.198916222116275,0,0,0,1.83334686136996,0,1.47856086217045,0,0,0,0,1.09394961803644,0,0.992422356778588,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0.556157009460346,0.627944742804112,0.471346769748006,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7492824225286,0,0,3.24380752213598,2.0611549059201,1.70685094975177,0,0,0,0,0.233939463462106,1.19370465096821,0,2.2589216407792,0,3.47214540203349,0.385870790539723,0,0.940634592723046,0.245148321753905,5.4205605833374,0,0,0,0,0,0,0,3.03541695629618,0,2.88868920081006,0,0,0.143339583151451,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,1.93778776509765,0.801652215796681,2.57305718697566,0,0,0,0,0.103432995861895,0.426467963801962,0.714193294391221,0.129177819672012,0.434523000071005,0,0.445530107947154,2.02117188958219,0,0,0.0673520530145875,0.358611026963382,0.332660356546013,4.4771797736036,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr16:84875618..84875659,+ | |||
}} | }} |
Latest revision as of 12:56, 25 July 2015
Short description: | p@chr16:84875618..84875659, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84875618..84875659, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.08e-15 | 253 |
epithelial cell of lung | 1.19e-13 | 19 |
embryonic stem cell | 2.17e-13 | 5 |
epithelial cell of cervix | 9.13e-09 | 2 |
neuron | 3.25e-07 | 6 |
neuroblast | 3.25e-07 | 6 |
electrically signaling cell | 3.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.19e-13 | 19 |
lung epithelium | 1.19e-13 | 19 |
lung | 1.33e-11 | 22 |
respiratory tube | 1.33e-11 | 22 |
respiration organ | 1.33e-11 | 22 |
pair of lungs | 1.33e-11 | 22 |
lung primordium | 1.33e-11 | 22 |
lung bud | 1.33e-11 | 22 |
epithelial bud | 6.50e-10 | 37 |
respiratory system epithelium | 7.88e-09 | 28 |
uterine epithelium | 9.13e-09 | 2 |
cervix epithelium | 9.13e-09 | 2 |
endo-epithelium | 1.80e-08 | 82 |
thoracic segment of trunk | 4.47e-08 | 52 |
epithelial fold | 2.12e-07 | 47 |
thoracic cavity element | 4.85e-07 | 34 |
thoracic cavity | 4.85e-07 | 34 |
thoracic segment organ | 8.39e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-31 | 106 |
cell type cancer | 4.23e-25 | 143 |
respiratory system cancer | 1.23e-20 | 16 |
lung cancer | 1.19e-17 | 15 |
adenocarcinoma | 2.77e-15 | 25 |
cancer | 2.80e-14 | 235 |
disease of cellular proliferation | 8.07e-14 | 239 |
organ system cancer | 5.80e-12 | 137 |
thoracic cancer | 8.53e-11 | 4 |
breast cancer | 8.53e-11 | 4 |
bronchus cancer | 2.20e-10 | 7 |
bronchogenic carcinoma | 2.20e-10 | 7 |
squamous cell carcinoma | 3.97e-10 | 14 |
signet ring cell adenocarcinoma | 2.13e-09 | 2 |
lung carcinoma | 5.83e-08 | 9 |
gastrointestinal system cancer | 5.54e-07 | 14 |