FFCP PHASE1:Hg19::chr14:54976575..54976602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10668 | |EntrezGene=10668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15528 | |HGNC=15528 | ||
|TSSclassifier=strong | |||
|UniProt=Q99675 | |UniProt=Q99675 | ||
|association_with_transcript=0bp_to_NM_006568,uc001xay.2,uc001xaz.2,uc010tra.1_5end | |association_with_transcript=0bp_to_NM_006568,uc001xay.2,uc001xaz.2,uc010tra.1_5end | ||
|cluster_id=chr14:54976575..54976602,+ | |||
|description=CAGE_peak_2_at_CGRRF1_5end | |description=CAGE_peak_2_at_CGRRF1_5end | ||
|id=chr14:54976575..54976602,+ | |id=chr14:54976575..54976602,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.37e-11!18;CL:0000789!4.37e-11!18;CL:0002420!4.37e-11!18;CL:0002419!4.37e-11!18;CL:0000790!4.37e-11!18;CL:0000838!2.00e-09!52;CL:0000542!3.06e-09!53;CL:0000051!3.06e-09!53;CL:0000084!8.99e-09!25;CL:0000827!8.99e-09!25;CL:0000625!1.87e-07!11 | |ontology_enrichment_celltype=CL:0000791!4.37e-11!18;CL:0000789!4.37e-11!18;CL:0002420!4.37e-11!18;CL:0002419!4.37e-11!18;CL:0000790!4.37e-11!18;CL:0000838!2.00e-09!52;CL:0000542!3.06e-09!53;CL:0000051!3.06e-09!53;CL:0000084!8.99e-09!25;CL:0000827!8.99e-09!25;CL:0000625!1.87e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.44e-18;18!CL:0000789;1.44e-18;18!CL:0002419;1.44e-18;18!CL:0000084;1.72e-13;25!CL:0000625;6.20e-12;11!CL:0000624;8.08e-10;6!CL:0000542;1.77e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.35e-19,18;CL:0000789,1.35e-19,18;CL:0002420,1.35e-19,18;CL:0002419,1.35e-19,18;CL:0000790,1.35e-19,18;CL:0000838,3.52e-14,52;CL:0000084,4.77e-14,25;CL:0000827,4.77e-14,25;CL:0000542,9.50e-14,53;CL:0000051,9.50e-14,53;CL:0000625,7.38e-13,11;CL:0000624,6.01e-10,6;CL:0002087,1.32e-08,115;CL:0000738,6.75e-08,136;CL:0002031,4.01e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.44e-18;18!CL:0000051;1.77e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-14!115;UBERON:0001049!4.61e-10!57;UBERON:0005068!4.61e-10!57;UBERON:0006241!4.61e-10!57;UBERON:0007135!4.61e-10!57;UBERON:0002780!1.65e-09!41;UBERON:0001890!1.65e-09!41;UBERON:0006240!1.65e-09!41;UBERON:0003080!8.49e-09!42;UBERON:0001893!4.21e-08!34;UBERON:0002791!1.14e-07!33;UBERON:0002616!1.41e-07!59;UBERON:0002020!1.73e-07!34;UBERON:0003528!1.73e-07!34;UBERON:0001869!1.97e-07!32;UBERON:0001017!3.30e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!1.20e-14!115;UBERON:0001049!4.61e-10!57;UBERON:0005068!4.61e-10!57;UBERON:0006241!4.61e-10!57;UBERON:0007135!4.61e-10!57;UBERON:0002780!1.65e-09!41;UBERON:0001890!1.65e-09!41;UBERON:0006240!1.65e-09!41;UBERON:0003080!8.49e-09!42;UBERON:0001893!4.21e-08!34;UBERON:0002791!1.14e-07!33;UBERON:0002616!1.41e-07!59;UBERON:0002020!1.73e-07!34;UBERON:0003528!1.73e-07!34;UBERON:0001869!1.97e-07!32;UBERON:0001017!3.30e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.22e-08;41!UBERON:0001890;1.22e-08;41!UBERON:0001893;4.31e-08;34!UBERON:0001950;2.04e-07;20!UBERON:0001869;3.27e-07;32!UBERON:0000073;4.99e-07;53!UBERON:0002616;4.99e-07;53!UBERON:0002791;5.20e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.13e-13,56;UBERON:0005068,8.13e-13,56;UBERON:0006241,8.13e-13,56;UBERON:0007135,8.13e-13,56;UBERON:0002780,9.12e-13,41;UBERON:0001890,9.12e-13,41;UBERON:0003080,9.12e-13,41;UBERON:0006240,9.12e-13,41;UBERON:0000073,1.27e-11,53;UBERON:0002616,1.27e-11,53;UBERON:0001893,8.37e-10,34;UBERON:0007023,8.98e-10,114;UBERON:0002346,2.23e-09,86;UBERON:0003075,8.90e-09,82;UBERON:0007284,8.90e-09,82;UBERON:0003056,1.31e-08,61;UBERON:0001869,1.51e-08,32;UBERON:0001017,1.83e-08,81;UBERON:0002791,2.52e-08,32;UBERON:0000955,4.94e-08,68;UBERON:0006238,4.94e-08,68;UBERON:0001950,6.66e-08,20;UBERON:0003528,1.37e-07,34;UBERON:0002020,1.37e-07,34;UBERON:0002619,6.11e-07,22;UBERON:0001016,7.73e-07,89 | |||
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| ||
|short_description=p2@CGRRF1 | |short_description=p2@CGRRF1 | ||
}} | }} |
Latest revision as of 07:54, 20 September 2015
Short description: | p2@CGRRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CGRRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_006568, uc001xay.2, uc001xaz.2, uc010tra.1_5end |
EntrezGene: | CGRRF1 |
HGNC: | 15528 |
UniProt: | Q99675 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.35e-19 | 18 |
alpha-beta T cell | 1.35e-19 | 18 |
immature T cell | 1.35e-19 | 18 |
mature T cell | 1.35e-19 | 18 |
immature alpha-beta T cell | 1.35e-19 | 18 |
lymphoid lineage restricted progenitor cell | 3.52e-14 | 52 |
T cell | 4.77e-14 | 25 |
pro-T cell | 4.77e-14 | 25 |
lymphocyte | 9.50e-14 | 53 |
common lymphoid progenitor | 9.50e-14 | 53 |
CD8-positive, alpha-beta T cell | 7.38e-13 | 11 |
CD4-positive, alpha-beta T cell | 6.01e-10 | 6 |
nongranular leukocyte | 1.32e-08 | 115 |
leukocyte | 6.75e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 4.01e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
neural tube | 8.13e-13 | 56 |
neural rod | 8.13e-13 | 56 |
future spinal cord | 8.13e-13 | 56 |
neural keel | 8.13e-13 | 56 |
regional part of forebrain | 9.12e-13 | 41 |
forebrain | 9.12e-13 | 41 |
anterior neural tube | 9.12e-13 | 41 |
future forebrain | 9.12e-13 | 41 |
regional part of nervous system | 1.27e-11 | 53 |
regional part of brain | 1.27e-11 | 53 |
telencephalon | 8.37e-10 | 34 |
adult organism | 8.98e-10 | 114 |
neurectoderm | 2.23e-09 | 86 |
neural plate | 8.90e-09 | 82 |
presumptive neural plate | 8.90e-09 | 82 |
pre-chordal neural plate | 1.31e-08 | 61 |
cerebral hemisphere | 1.51e-08 | 32 |
central nervous system | 1.83e-08 | 81 |
regional part of telencephalon | 2.52e-08 | 32 |
brain | 4.94e-08 | 68 |
future brain | 4.94e-08 | 68 |
neocortex | 6.66e-08 | 20 |
brain grey matter | 1.37e-07 | 34 |
gray matter | 1.37e-07 | 34 |
regional part of cerebral cortex | 6.11e-07 | 22 |
nervous system | 7.73e-07 | 89 |