FFCP PHASE1:Hg19::chr16:89386849..89386869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89386849..89386869,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr16:89386849..89386869,+ | |description=CAGE_peak_at_chr16:89386849..89386869,+ | ||
|id=chr16:89386849..89386869,+ | |id=chr16:89386849..89386869,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.31e-10!42;CL:0000860!4.41e-10!45;CL:0000766!6.32e-10!76;CL:0000839!1.69e-07!70;CL:0000763!1.87e-07!112;CL:0000049!1.87e-07!112;CL:0002194!2.44e-07!63;CL:0000576!2.44e-07!63;CL:0000040!2.44e-07!63;CL:0000559!2.44e-07!63;CL:0000557!2.89e-07!71;CL:0002009!7.38e-07!65 | |ontology_enrichment_celltype=CL:0002057!1.31e-10!42;CL:0000860!4.41e-10!45;CL:0000766!6.32e-10!76;CL:0000839!1.69e-07!70;CL:0000763!1.87e-07!112;CL:0000049!1.87e-07!112;CL:0002194!2.44e-07!63;CL:0000576!2.44e-07!63;CL:0000040!2.44e-07!63;CL:0000559!2.44e-07!63;CL:0000557!2.89e-07!71;CL:0002009!7.38e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.87e-09;33!CL:0002057;2.87e-09;33!CL:0000775;2.64e-08;3!CL:0000228;4.82e-07;1!CL:0002372;4.82e-07;1!CL:0000473;6.07e-07;39!CL:0000234;6.07e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.87e-10,72;CL:0000860,5.49e-09,42;CL:0002057,5.49e-09,42;CL:0000775,2.74e-08,3;CL:0000473,1.11e-07,48;CL:0000234,1.11e-07,48;CL:0002194,2.88e-07,59;CL:0000576,2.88e-07,59;CL:0000040,2.88e-07,59;CL:0000559,2.88e-07,59;CL:0000228,4.97e-07,1;CL:0002372,4.97e-07,1;CL:0002009,5.61e-07,61;CL:0000763,7.61e-07,108;CL:0000049,7.61e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,8.75e-07,1;DOID:3165,8.75e-07,1;DOID:0060121,8.75e-07,1;DOID:2438,8.75e-07,1;DOID:4418,8.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.55e-13!102;UBERON:0003061!8.55e-13!102;UBERON:0002193!1.22e-11!112;UBERON:0000178!7.83e-11!15;UBERON:0000179!7.83e-11!15;UBERON:0000463!7.83e-11!15;UBERON:0003081!6.70e-10!216 | |ontology_enrichment_uberon=UBERON:0002390!8.55e-13!102;UBERON:0003061!8.55e-13!102;UBERON:0002193!1.22e-11!112;UBERON:0000178!7.83e-11!15;UBERON:0000179!7.83e-11!15;UBERON:0000463!7.83e-11!15;UBERON:0003081!6.70e-10!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.64e-36;15!UBERON:0000179;3.64e-36;15!UBERON:0000463;3.64e-36;15!UBERON:0002390;3.87e-18;32!UBERON:0002193;5.83e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.03e-36,15;UBERON:0000179,4.03e-36,15;UBERON:0000463,4.03e-36,15;UBERON:0002390,5.18e-18,98;UBERON:0003061,5.18e-18,98;UBERON:0002193,5.90e-16,108;UBERON:0003081,1.67e-11,203;UBERON:0000926,7.53e-08,315;UBERON:0004120,7.53e-08,315;UBERON:0006603,7.53e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.369363174230364,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0.145398238779565,1.13362783106643,0.727752183563449,0,2.05583944010913,0.309706370895104,0.575384784644301,3.58624989140741,0.47296445977717,0,1.29096936716765,1.35426486594342,0.941211697713023,3.27487380069415,0.898893937780338,0.612167784741805,0.320929027076094,0.639337125799041,0,1.59570926097305,0.426224750532694,0.290209238628584,0.56738522469114,0,0.502497330513487,3.12889751052121,0.65156653411535,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.417989933073621,0.775250277507987,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0.831192346452549,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.448524337381443,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,4.27910715122155,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.03384013061444,0.647142602455851,0.533637789017222,0,0,0,0.496215615637554,0,0,0,0,0,0,0.771048469013278,0.710246901252508,0.328508624055237,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,2.27466768141793,1.02056223165909,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0.30982349809975,1.40847801266121,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,9.13405696617905,1.52927441428475,13.6715324921799,7.62341681464925,7.81588318863769,14.2664128462398,4.32025149790492,12.6900028207083,0,0,0,0,0,0,0,0,0.191505370132367,1.2700414963433,0,0,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0,0.138674673013139,0,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,0.137041924646751,1.58971689362392,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.418411385249333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0.466311601748341,0.73927574994817,0.318593534327405,0,0.155262956876259,0.414706207840855,1.06336685823198,0,0.450772826991655,0,0.406870733204662,0.909243296012797,0.107410557042488,1.85613503951397,0,0.400027764663154,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0.38582807654183,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0.920529751259204,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0.375935671919414,0.580120991762195,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.369363174230364,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0.145398238779565,1.13362783106643,0.727752183563449,0,2.05583944010913,0.309706370895104,0.575384784644301,3.58624989140741,0.47296445977717,0,1.29096936716765,1.35426486594342,0.941211697713023,3.27487380069415,0.898893937780338,0.612167784741805,0.320929027076094,0.639337125799041,0,1.59570926097305,0.426224750532694,0.290209238628584,0.56738522469114,0,0.502497330513487,3.12889751052121,0.65156653411535,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.417989933073621,0.775250277507987,0,0,0,0,0,0,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0.831192346452549,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,0,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.448524337381443,0,0.36669142910475,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,4.27910715122155,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,5.9832291840805,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.03384013061444,0.647142602455851,0.533637789017222,0,0,0,0.496215615637554,0,0,0,0,0,0,0.771048469013278,0.710246901252508,0.328508624055237,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,2.27466768141793,1.02056223165909,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0.30982349809975,1.40847801266121,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,9.13405696617905,1.52927441428475,13.6715324921799,7.62341681464925,7.81588318863769,14.2664128462398,4.32025149790492,12.6900028207083,0,0,0,0,0,0,0,0,0.191505370132367,1.2700414963433,0,0,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.751617097072463,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0,0.138674673013139,0,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,0.137041924646751,1.58971689362392,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.418411385249333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0.466311601748341,0.73927574994817,0.318593534327405,0,0.155262956876259,0.414706207840855,1.06336685823198,0,0.450772826991655,0,0.406870733204662,0.909243296012797,0.107410557042488,1.85613503951397,0,0.400027764663154,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0.38582807654183,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0,0,0,0,0.920529751259204,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0.375935671919414,0.580120991762195,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p@chr16:89386849..89386869,+ | |short_description=p@chr16:89386849..89386869,+ | ||
}} | }} |
Latest revision as of 13:26, 25 July 2015
Short description: | p@chr16:89386849..89386869, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89386849..89386869, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.87e-10 | 72 |
classical monocyte | 5.49e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.49e-09 | 42 |
neutrophil | 2.74e-08 | 3 |
defensive cell | 1.11e-07 | 48 |
phagocyte | 1.11e-07 | 48 |
monopoietic cell | 2.88e-07 | 59 |
monocyte | 2.88e-07 | 59 |
monoblast | 2.88e-07 | 59 |
promonocyte | 2.88e-07 | 59 |
multinucleate cell | 4.97e-07 | 1 |
myotube | 4.97e-07 | 1 |
macrophage dendritic cell progenitor | 5.61e-07 | 61 |
myeloid cell | 7.61e-07 | 108 |
common myeloid progenitor | 7.61e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 4.03e-36 | 15 |
haemolymphatic fluid | 4.03e-36 | 15 |
organism substance | 4.03e-36 | 15 |
hematopoietic system | 5.18e-18 | 98 |
blood island | 5.18e-18 | 98 |
hemolymphoid system | 5.90e-16 | 108 |
lateral plate mesoderm | 1.67e-11 | 203 |
mesoderm | 7.53e-08 | 315 |
mesoderm-derived structure | 7.53e-08 | 315 |
presumptive mesoderm | 7.53e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 8.75e-07 | 1 |
skin benign neoplasm | 8.75e-07 | 1 |
integumentary system benign neoplasm | 8.75e-07 | 1 |
dermis tumor | 8.75e-07 | 1 |
cutaneous fibrous histiocytoma | 8.75e-07 | 1 |