FFCP PHASE1:Hg19::chr17:38613757..38613870,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38613757..38613870,+
|short_description=p@chr17:38613757..38613870,+
|description=CAGE_peak_at_chr17:38613757..38613870,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38613757..38613870,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38613757..38613870,+ | |||
|id=chr17:38613757..38613870,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.33e-21!180;CL:0000222!4.39e-15!119;CL:0000057!1.04e-14!75;CL:0000183!2.18e-12!59;CL:0000680!5.48e-12!57;CL:0000056!5.48e-12!57;CL:0000355!5.48e-12!57;CL:0000187!7.17e-11!54;CL:0000393!7.06e-10!60;CL:0000211!7.06e-10!60;CL:0000192!1.32e-07!42;CL:0000514!1.32e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.87e-07;55!CL:0002334;3.82e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.31e-16,76;CL:0000222,9.69e-15,121;CL:0000680,5.60e-13,58;CL:0000056,5.60e-13,58;CL:0000355,5.60e-13,58;CL:0000187,1.11e-11,55;CL:0000393,8.37e-11,61;CL:0000211,8.37e-11,61;CL:0000192,6.91e-08,43;CL:0000514,6.91e-08,43;CL:0002334,3.44e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;2.77e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.07e-16!143;UBERON:0002100!9.45e-16!216;UBERON:0000914!9.26e-13!83;UBERON:0002329!9.26e-13!83;UBERON:0003077!9.26e-13!83;UBERON:0003059!9.26e-13!83;UBERON:0007282!9.26e-13!83;UBERON:0009618!9.26e-13!83;UBERON:0007285!9.26e-13!83;UBERON:0004872!1.12e-12!84;UBERON:0000490!1.27e-12!138;UBERON:0002385!1.51e-12!63;UBERON:0001015!1.51e-12!63;UBERON:0000383!1.51e-12!63;UBERON:0001134!1.98e-12!61;UBERON:0002036!1.98e-12!61;UBERON:0003082!1.98e-12!61;UBERON:0003914!3.03e-12!118;UBERON:0000486!3.06e-12!82;UBERON:0004290!4.62e-12!70;UBERON:0003104!1.57e-10!238;UBERON:0009142!1.57e-10!238;UBERON:0000475!2.68e-10!365;UBERON:0000481!3.62e-10!347;UBERON:0002049!1.04e-09!79;UBERON:0007798!1.04e-09!79;UBERON:0001981!1.41e-08!60;UBERON:0007500!1.41e-08!60;UBERON:0004537!1.41e-08!60;UBERON:0006965!1.41e-08!60;UBERON:0000055!2.49e-08!69;UBERON:0000468!3.59e-08!659;UBERON:0001009!1.09e-07!113;UBERON:0004535!2.21e-07!110;UBERON:0001637!4.35e-07!42;UBERON:0003509!4.35e-07!42;UBERON:0004572!4.35e-07!42;UBERON:0000477!5.21e-07!286;UBERON:0000119!5.41e-07!312;UBERON:0004573!7.06e-07!33;UBERON:0004571!7.06e-07!33;UBERON:0000483!7.37e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.57e-07;31!UBERON:0001015;1.57e-07;31!UBERON:0000383;1.57e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.42e-17,160;UBERON:0009142,4.42e-17,160;UBERON:0005256,2.15e-16,122;UBERON:0007503,1.41e-14,78;UBERON:0002385,3.29e-13,64;UBERON:0001015,3.29e-13,64;UBERON:0000383,3.29e-13,64;UBERON:0001134,4.73e-13,62;UBERON:0002036,4.73e-13,62;UBERON:0003082,4.73e-13,62;UBERON:0007524,7.60e-13,73;UBERON:0002100,9.72e-13,199;UBERON:0002329,1.07e-12,71;UBERON:0003059,1.07e-12,71;UBERON:0007282,1.07e-12,71;UBERON:0004290,1.07e-12,71;UBERON:0009618,1.07e-12,71;UBERON:0004872,2.81e-12,83;UBERON:0003077,2.95e-12,72;UBERON:0007285,2.95e-12,72;UBERON:0000486,2.06e-11,83;UBERON:0000490,2.31e-11,148;UBERON:0003914,3.36e-11,117;UBERON:0000926,1.00e-09,315;UBERON:0004120,1.00e-09,315;UBERON:0006603,1.00e-09,315;UBERON:0002049,4.94e-09,78;UBERON:0007798,4.94e-09,78;UBERON:0001009,4.05e-08,112;UBERON:0004535,4.87e-08,109;UBERON:0007500,6.57e-08,59;UBERON:0001981,6.57e-08,59;UBERON:0004537,6.57e-08,59;UBERON:0006965,6.57e-08,59;UBERON:0000055,2.27e-07,68 | |||
|phase1_expression=23.7998676844429,9.63452357509424,21.8479326348755,27.0197905553452,27.2646267600646,38.3828950604162,22.796989035148,6.31719873426831,21.1560358841869,0.491467873003018,4.18680700783456,0.436882744260345,0.263766978228454,32.9218498873724,23.8606110524099,3.36162573225888,2.41077811209591,2.92124036154949,1.95173119516203,0.246242116153576,3.4680117511523,0,0.286235987131057,0.273748850145768,0.376627918784408,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,4.69490601792545,1.15076305659177,72.2878304769133,17.0454889616202,57.0695284705645,0,5.83961844363163,0.283604451492204,1.10864698731282,1.84453049955565,1.0478326039817,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0.39752481473341,1.72046919021225,2.42998351125316,0.56530794192401,4.61449379830897,3.57653454522088,0.208994966536811,1.29208379584664,0.35576626268671,0.33472061276467,7.65375702507379,5.32190474002959,4.39311703586705,4.41195696415042,3.24056779152704,3.03619076165871,1.12264686313085,1.12611480483322,0,0,2.38162267109529,0,0,0,7.45457927542978,7.34456967654563,1.05927344650575,12.0471380714502,4.25602058638028,11.7742296029885,5.33744978648525,8.14002909776628,1.55605517699883,1.0776853765575,1.63461903113459,7.41651395460164,8.06646294271999,0.234321431833797,6.24320153660641,1.71141546463335,5.52960118041664,0.117434498643765,0,0.421352420106746,4.28723759635276,1.96534907698829,3.30642499762449,35.6400857184616,22.5012905643487,0,2.87447256726495,0.841680569770331,0,0.831192346452549,6.58466431321257,19.0022433395392,20.4323760112972,1.47461838108027,6.63741652048789,7.04739383101272,6.99375273826554,7.50227740211006,5.77094163735258,4.63752972082133,8.00302482225836,0.675105328965065,1.75386609290158,4.03894038790583,11.5062373302874,11.153577920498,7.81021103536552,2.21654616100809,4.0694542154517,0.193260853163297,0.272746120590835,0.286804595389004,0.731842236777572,0.662648841607426,0.813357600086629,0.207322110030741,0.504641701751257,1.09493207722749,3.12899064659632,7.71889125831462,0,5.57241513638375,6.49691533502627,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,1.15424147083917,2.21446636387394,4.20725321410337,2.4694440679884,5.88034845542168,40.5616111429859,22.6050259835854,41.3552934676983,0,0.737930631258681,2.23038153388083,0.329250856225877,0,0,0.740707561268237,0.977424915930974,3.11980435583874,1.44331342025273,0,0.821860859650752,2.45422961193825,2.77791307545966,2.66355813128438,0.790204397959275,1.71697232418975,0.492434012174795,0,0.148631162288728,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0.205654985406647,0,0.285826432630578,1.56983518083505,0.43596006883328,1.7601188597028,1.93907573636667,0,12.67954128834,8.77595784730073,15.6011155367049,2.82928111688356,14.1849132023278,7.19339883343468,6.14805372730035,7.5967024754802,4.11620168390384,0.65147236858747,3.909311436168,12.6712299669349,7.53598442648965,1.74306691720059,12.296677915393,1.2162378064119,3.51579964002488,0,2.39624855491583,27.5668646001873,4.27910715122155,8.54209709338717,11.5066740628215,3.9393411912777,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,39.6293518252822,82.5281359748467,17.3609615167831,36.6028716294221,49.9601168632053,32.4866974969905,11.9484243292567,4.21324539618807,11.3703752027992,6.2083842775503,3.32112799267718,2.58116835958384,17.2029556646804,15.6640925970192,10.6374461381365,0,0,0,10.6094650006191,3.32870879020994,3.62868351995616,16.8713309316768,2.455391572609,12.9103643439214,32.8036222094594,14.3278029738677,13.3508754549194,20.7785293022987,1.3878872442239,6.5697838365857,3.53146770859379,4.67328986265259,7.78609535681727,0.604297247958111,0.601519410909855,0.552485933615378,7.46293913069944,3.45973219212762,11.9323217613076,0.451199612907412,0.15403067420883,0,0,0.527758144464379,6.8240030442538,2.04112446331819,5.82972973475776,1.54227252690289,1.89662506280697,8.52872615553251,0,0,1.34324852833307,0,0,0,0.328014645699706,0,4.12164046590889,0.183138929636687,0,0.574265537996172,0.650060246036521,9.64103579064957,12.4705226596837,4.00526404498075,5.37262861541453,1.65403886981437,8.1639386099888,6.81578461396874,2.21589231281862,4.62966585363034,0.495854746082934,0.768760269460425,0.127612712494584,0.2023155617111,36.2579528451883,43.758916209459,0.6970372701606,1.23213432070436,2.12922412126809,2.60979897622522,2.22389062924704,2.14687330112987,4.46590043231601,6.32758849437452,4.19386426632415,3.07077349573601,7.27496279657665,3.81843897511124,0.78494864019923,1.79872457583315,1.92175920815238,2.23843564456804,2.83055474202642,0,3.79132610615083,1.95053495635836,7.7988316682011,9.50851320810799,11.6024924696788,6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|phase1_expression=23.7998676844429,9.63452357509424,21.8479326348755,27.0197905553452,27.2646267600646,38.3828950604162,22.796989035148,6.31719873426831,21.1560358841869,0.491467873003018,4.18680700783456,0.436882744260345,0.263766978228454,32.9218498873724,23.8606110524099,3.36162573225888,2.41077811209591,2.92124036154949,1.95173119516203,0.246242116153576,3.4680117511523,0,0.286235987131057,0.273748850145768,0.376627918784408,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895661896959697,0.32389366601898,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,4.69490601792545,1.15076305659177,72.2878304769133,17.0454889616202,57.0695284705645,0,5.83961844363163,0.283604451492204,1.10864698731282,1.84453049955565,1.0478326039817,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0.39752481473341,1.72046919021225,2.42998351125316,0.56530794192401,4.61449379830897,3.57653454522088,0.208994966536811,1.29208379584664,0.35576626268671,0.33472061276467,7.65375702507379,5.32190474002959,4.39311703586705,4.41195696415042,3.24056779152704,3.03619076165871,1.12264686313085,1.12611480483322,0,0,2.38162267109529,0,0,0,7.45457927542978,7.34456967654563,1.05927344650575,12.0471380714502,4.25602058638028,11.7742296029885,5.33744978648525,8.14002909776628,1.55605517699883,1.0776853765575,1.63461903113459,7.41651395460164,8.06646294271999,0.234321431833797,6.24320153660641,1.71141546463335,5.52960118041664,0.117434498643765,0,0.421352420106746,4.28723759635276,1.96534907698829,3.30642499762449,35.6400857184616,22.5012905643487,0,2.87447256726495,0.841680569770331,0,0.831192346452549,6.58466431321257,19.0022433395392,20.4323760112972,1.47461838108027,6.63741652048789,7.04739383101272,6.99375273826554,7.50227740211006,5.77094163735258,4.63752972082133,8.00302482225836,0.675105328965065,1.75386609290158,4.03894038790583,11.5062373302874,11.153577920498,7.81021103536552,2.21654616100809,4.0694542154517,0.193260853163297,0.272746120590835,0.286804595389004,0.731842236777572,0.662648841607426,0.813357600086629,0.207322110030741,0.504641701751257,1.09493207722749,3.12899064659632,7.71889125831462,0,5.57241513638375,6.49691533502627,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,1.15424147083917,2.21446636387394,4.20725321410337,2.4694440679884,5.88034845542168,40.5616111429859,22.6050259835854,41.3552934676983,0,0.737930631258681,2.23038153388083,0.329250856225877,0,0,0.740707561268237,0.977424915930974,3.11980435583874,1.44331342025273,0,0.821860859650752,2.45422961193825,2.77791307545966,2.66355813128438,0.790204397959275,1.71697232418975,0.492434012174795,0,0.148631162288728,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,5.13217338068116,0.205654985406647,0,0.285826432630578,1.56983518083505,0.43596006883328,1.7601188597028,1.93907573636667,0,12.67954128834,8.77595784730073,15.6011155367049,2.82928111688356,14.1849132023278,7.19339883343468,6.14805372730035,7.5967024754802,4.11620168390384,0.65147236858747,3.909311436168,12.6712299669349,7.53598442648965,1.74306691720059,12.296677915393,1.2162378064119,3.51579964002488,0,2.39624855491583,27.5668646001873,4.27910715122155,8.54209709338717,11.5066740628215,3.9393411912777,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,39.6293518252822,82.5281359748467,17.3609615167831,36.6028716294221,49.9601168632053,32.4866974969905,11.9484243292567,4.21324539618807,11.3703752027992,6.2083842775503,3.32112799267718,2.58116835958384,17.2029556646804,15.6640925970192,10.6374461381365,0,0,0,10.6094650006191,3.32870879020994,3.62868351995616,16.8713309316768,2.455391572609,12.9103643439214,32.8036222094594,14.3278029738677,13.3508754549194,20.7785293022987,1.3878872442239,6.5697838365857,3.53146770859379,4.67328986265259,7.78609535681727,0.604297247958111,0.601519410909855,0.552485933615378,7.46293913069944,3.45973219212762,11.9323217613076,0.451199612907412,0.15403067420883,0,0,0.527758144464379,6.8240030442538,2.04112446331819,5.82972973475776,1.54227252690289,1.89662506280697,8.52872615553251,0,0,1.34324852833307,0,0,0,0.328014645699706,0,4.12164046590889,0.183138929636687,0,0.574265537996172,0.650060246036521,9.64103579064957,12.4705226596837,4.00526404498075,5.37262861541453,1.65403886981437,8.1639386099888,6.81578461396874,2.21589231281862,4.62966585363034,0.495854746082934,0.768760269460425,0.127612712494584,0.2023155617111,36.2579528451883,43.758916209459,0.6970372701606,1.23213432070436,2.12922412126809,2.60979897622522,2.22389062924704,2.14687330112987,4.46590043231601,6.32758849437452,4.19386426632415,3.07077349573601,7.27496279657665,3.81843897511124,0.78494864019923,1.79872457583315,1.92175920815238,2.23843564456804,2.83055474202642,0,3.79132610615083,1.95053495635836,7.7988316682011,9.50851320810799,11.6024924696788,6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| ||
|short_description=p@chr17:38613757..38613870,+ | |||
}} | }} |
Latest revision as of 16:29, 25 July 2015
Short description: | p@chr17:38613757..38613870, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613757..38613870, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.31e-16 | 76 |
mesodermal cell | 9.69e-15 | 121 |
muscle precursor cell | 5.60e-13 | 58 |
myoblast | 5.60e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.60e-13 | 58 |
muscle cell | 1.11e-11 | 55 |
electrically responsive cell | 8.37e-11 | 61 |
electrically active cell | 8.37e-11 | 61 |
smooth muscle cell | 6.91e-08 | 43 |
smooth muscle myoblast | 6.91e-08 | 43 |
preadipocyte | 3.44e-07 | 12 |