FFCP PHASE1:Hg19::chr10:20293031..20293070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:20293031..20293070,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:20293031..20293070,+ | |description=CAGE_peak_at_chr10:20293031..20293070,+ | ||
|id=chr10:20293031..20293070,+ | |id=chr10:20293031..20293070,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.36e-109!42;CL:0000860!6.03e-101!45;CL:0000766!2.99e-70!76;CL:0002194!1.76e-68!63;CL:0000576!1.76e-68!63;CL:0000040!1.76e-68!63;CL:0000559!1.76e-68!63;CL:0002009!3.76e-66!65;CL:0000839!6.71e-61!70;CL:0000557!6.16e-60!71;CL:0000738!1.33e-47!140;CL:0002087!1.35e-46!119;CL:0000763!5.35e-45!112;CL:0000049!5.35e-45!112;CL:0002031!3.25e-37!124;CL:0000037!5.24e-37!172;CL:0000566!5.24e-37!172;CL:0000988!1.87e-34!182;CL:0002032!5.27e-33!165;CL:0000837!5.27e-33!165;CL:0002393!3.68e-20!9;CL:0002397!3.68e-20!9;CL:0000134!1.39e-14!358;CL:0002320!4.13e-14!365;CL:0000767!1.07e-12!3;CL:0000219!1.90e-12!390;CL:0000842!2.02e-12!3;CL:0000048!1.85e-10!430;CL:0000723!3.55e-10!436;CL:0000034!8.22e-10!444;CL:0000224!1.99e-09!4;CL:0000094!4.62e-08!8 | |ontology_enrichment_celltype=CL:0002057!9.36e-109!42;CL:0000860!6.03e-101!45;CL:0000766!2.99e-70!76;CL:0002194!1.76e-68!63;CL:0000576!1.76e-68!63;CL:0000040!1.76e-68!63;CL:0000559!1.76e-68!63;CL:0002009!3.76e-66!65;CL:0000839!6.71e-61!70;CL:0000557!6.16e-60!71;CL:0000738!1.33e-47!140;CL:0002087!1.35e-46!119;CL:0000763!5.35e-45!112;CL:0000049!5.35e-45!112;CL:0002031!3.25e-37!124;CL:0000037!5.24e-37!172;CL:0000566!5.24e-37!172;CL:0000988!1.87e-34!182;CL:0002032!5.27e-33!165;CL:0000837!5.27e-33!165;CL:0002393!3.68e-20!9;CL:0002397!3.68e-20!9;CL:0000134!1.39e-14!358;CL:0002320!4.13e-14!365;CL:0000767!1.07e-12!3;CL:0000219!1.90e-12!390;CL:0000842!2.02e-12!3;CL:0000048!1.85e-10!430;CL:0000723!3.55e-10!436;CL:0000034!8.22e-10!444;CL:0000224!1.99e-09!4;CL:0000094!4.62e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.20e-48;33!CL:0002057;5.20e-48;33!CL:0000473;2.38e-34;39!CL:0000234;2.38e-34;39!CL:0000576;2.75e-32;48!CL:0000766;9.30e-20;69!CL:0000226;7.01e-15;3!CL:0000842;7.01e-15;3!CL:0000763;2.08e-09;100!CL:0002087;6.08e-09;104!CL:0002393;6.83e-08;6!CL:0002397;6.83e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.36e-54,42;CL:0002057,4.36e-54,42;CL:0000473,4.39e-47,48;CL:0000234,4.39e-47,48;CL:0002194,2.86e-37,59;CL:0000576,2.86e-37,59;CL:0000040,2.86e-37,59;CL:0000559,2.86e-37,59;CL:0002009,5.28e-36,61;CL:0000766,1.23e-34,72;CL:0000839,3.64e-33,66;CL:0000557,1.20e-32,67;CL:0002087,8.15e-24,115;CL:0000763,1.76e-22,108;CL:0000049,1.76e-22,108;CL:0000738,1.86e-22,136;CL:0000037,9.35e-18,168;CL:0002031,2.01e-17,120;CL:0000988,9.78e-17,177;CL:0000226,1.32e-14,3;CL:0000842,1.32e-14,3;CL:0002032,2.21e-14,161;CL:0000837,2.21e-14,161;CL:0000134,4.11e-07,354;CL:0002320,6.36e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.15e-39;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.51e-53!102;UBERON:0003061!3.51e-53!102;UBERON:0002371!2.43e-52!80;UBERON:0001474!3.77e-48!86;UBERON:0002193!1.15e-47!112;UBERON:0004765!7.89e-40!101;UBERON:0001434!7.89e-40!101;UBERON:0002405!1.75e-38!115;UBERON:0002204!6.89e-21!167;UBERON:0003081!2.00e-20!216;UBERON:0002384!1.81e-13!375;UBERON:0000926!6.48e-07!448;UBERON:0004120!6.48e-07!448;UBERON:0006603!6.48e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!3.51e-53!102;UBERON:0003061!3.51e-53!102;UBERON:0002371!2.43e-52!80;UBERON:0001474!3.77e-48!86;UBERON:0002193!1.15e-47!112;UBERON:0004765!7.89e-40!101;UBERON:0001434!7.89e-40!101;UBERON:0002405!1.75e-38!115;UBERON:0002204!6.89e-21!167;UBERON:0003081!2.00e-20!216;UBERON:0002384!1.81e-13!375;UBERON:0000926!6.48e-07!448;UBERON:0004120!6.48e-07!448;UBERON:0006603!6.48e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.12e-07;15!UBERON:0000179;8.12e-07;15!UBERON:0000463;8.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.39e-32,98;UBERON:0003061,6.39e-32,98;UBERON:0002193,8.73e-29,108;UBERON:0002371,1.36e-28,76;UBERON:0001474,2.24e-26,82;UBERON:0004765,7.14e-24,90;UBERON:0002405,4.82e-23,93;UBERON:0001434,2.67e-21,100;UBERON:0003081,2.82e-14,203;UBERON:0002204,6.28e-12,167;UBERON:0000926,2.61e-08,315;UBERON:0004120,2.61e-08,315;UBERON:0006603,2.61e-08,315;UBERON:0000178,9.94e-07,15;UBERON:0000179,9.94e-07,15;UBERON:0000463,9.94e-07,15 | |||
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|short_description=p@chr10:20293031..20293070,+ | |short_description=p@chr10:20293031..20293070,+ | ||
}} | }} |
Latest revision as of 12:28, 23 July 2015
Short description: | p@chr10:20293031..20293070, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:20293031..20293070, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.36e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.36e-54 | 42 |
defensive cell | 4.39e-47 | 48 |
phagocyte | 4.39e-47 | 48 |
monopoietic cell | 2.86e-37 | 59 |
monocyte | 2.86e-37 | 59 |
monoblast | 2.86e-37 | 59 |
promonocyte | 2.86e-37 | 59 |
macrophage dendritic cell progenitor | 5.28e-36 | 61 |
myeloid leukocyte | 1.23e-34 | 72 |
myeloid lineage restricted progenitor cell | 3.64e-33 | 66 |
granulocyte monocyte progenitor cell | 1.20e-32 | 67 |
nongranular leukocyte | 8.15e-24 | 115 |
myeloid cell | 1.76e-22 | 108 |
common myeloid progenitor | 1.76e-22 | 108 |
leukocyte | 1.86e-22 | 136 |
hematopoietic stem cell | 9.35e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 2.01e-17 | 120 |
hematopoietic cell | 9.78e-17 | 177 |
single nucleate cell | 1.32e-14 | 3 |
mononuclear cell | 1.32e-14 | 3 |
hematopoietic oligopotent progenitor cell | 2.21e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-14 | 161 |
mesenchymal cell | 4.11e-07 | 354 |
connective tissue cell | 6.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.39e-32 | 98 |
blood island | 6.39e-32 | 98 |
hemolymphoid system | 8.73e-29 | 108 |
bone marrow | 1.36e-28 | 76 |
bone element | 2.24e-26 | 82 |
skeletal element | 7.14e-24 | 90 |
immune system | 4.82e-23 | 93 |
skeletal system | 2.67e-21 | 100 |
lateral plate mesoderm | 2.82e-14 | 203 |
musculoskeletal system | 6.28e-12 | 167 |
mesoderm | 2.61e-08 | 315 |
mesoderm-derived structure | 2.61e-08 | 315 |
presumptive mesoderm | 2.61e-08 | 315 |
blood | 9.94e-07 | 15 |
haemolymphatic fluid | 9.94e-07 | 15 |
organism substance | 9.94e-07 | 15 |