FFCP PHASE1:Hg19::chr17:8065618..8065647,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:8065618..8065647,-
|short_description=p6@VAMP2
|description=CAGE_peak_6_at_VAMP2_5end
|association_with_transcript=39bp_to_AJ225044,HQ448696_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=P63027 | |UniProt=P63027 | ||
|association_with_transcript=39bp_to_AJ225044,HQ448696_5end | |||
|cluster_id=chr17:8065618..8065647,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_6_at_VAMP2_5end | |||
|id=chr17:8065618..8065647,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.67e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-34!115;UBERON:0005743!9.75e-23!86;UBERON:0001049!1.66e-22!57;UBERON:0005068!1.66e-22!57;UBERON:0006241!1.66e-22!57;UBERON:0007135!1.66e-22!57;UBERON:0001017!8.96e-22!82;UBERON:0000073!9.18e-22!94;UBERON:0001016!9.18e-22!94;UBERON:0002616!1.78e-19!59;UBERON:0002780!4.12e-19!41;UBERON:0001890!4.12e-19!41;UBERON:0006240!4.12e-19!41;UBERON:0003080!5.24e-19!42;UBERON:0000955!7.53e-19!69;UBERON:0006238!7.53e-19!69;UBERON:0002346!2.10e-18!90;UBERON:0003075!3.60e-18!86;UBERON:0007284!3.60e-18!86;UBERON:0001893!4.99e-16!34;UBERON:0002020!5.88e-16!34;UBERON:0003528!5.88e-16!34;UBERON:0002791!2.24e-15!33;UBERON:0001869!6.89e-15!32;UBERON:0003056!1.37e-13!61;UBERON:0002619!4.69e-13!22;UBERON:0000924!1.42e-12!173;UBERON:0006601!1.42e-12!173;UBERON:0000153!1.83e-12!129;UBERON:0007811!1.83e-12!129;UBERON:0004121!3.24e-12!169;UBERON:0001950!5.49e-12!20;UBERON:0000033!1.14e-11!123;UBERON:0000956!1.42e-11!25;UBERON:0000203!1.42e-11!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.96e-20;22!UBERON:0001893;5.11e-20;34!UBERON:0002780;1.85e-19;41!UBERON:0001890;1.85e-19;41!UBERON:0003528;2.37e-19;34!UBERON:0002020;2.37e-19;34!UBERON:0001869;4.89e-19;32!UBERON:0002791;6.32e-19;32!UBERON:0001950;9.60e-19;20!UBERON:0000073;1.87e-18;53!UBERON:0002616;1.87e-18;53!UBERON:0000956;5.67e-17;25!UBERON:0000203;5.67e-17;25!UBERON:0001017;1.12e-13;75!UBERON:0000955;6.94e-13;68!UBERON:0007023;1.22e-12;114!UBERON:0001016;1.94e-11;83!UBERON:0002420;1.09e-07;9!UBERON:0007245;1.09e-07;9!UBERON:0010009;1.09e-07;9!UBERON:0010011;1.09e-07;9!UBERON:0000454;1.09e-07;9!UBERON:0000125;1.32e-07;9!UBERON:0002308;1.32e-07;9!UBERON:0000200;1.82e-07;6!UBERON:0004732;6.10e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.68e-44,114;UBERON:0001049,1.45e-34,56;UBERON:0005068,1.45e-34,56;UBERON:0006241,1.45e-34,56;UBERON:0007135,1.45e-34,56;UBERON:0001017,3.62e-32,81;UBERON:0000073,5.81e-32,53;UBERON:0002616,5.81e-32,53;UBERON:0001016,7.10e-28,89;UBERON:0000955,1.09e-27,68;UBERON:0006238,1.09e-27,68;UBERON:0002780,2.49e-27,41;UBERON:0001890,2.49e-27,41;UBERON:0003080,2.49e-27,41;UBERON:0006240,2.49e-27,41;UBERON:0003075,8.31e-26,82;UBERON:0007284,8.31e-26,82;UBERON:0002346,2.50e-25,86;UBERON:0001893,3.21e-23,34;UBERON:0003528,4.13e-23,34;UBERON:0002020,4.13e-23,34;UBERON:0001869,1.89e-21,32;UBERON:0002791,2.72e-21,32;UBERON:0002619,2.11e-20,22;UBERON:0001950,9.84e-19,20;UBERON:0003056,6.98e-18,61;UBERON:0010314,9.74e-18,132;UBERON:0010371,1.48e-17,104;UBERON:0000956,5.97e-17,25;UBERON:0000203,5.97e-17,25;UBERON:0004121,1.51e-15,171;UBERON:0000924,1.51e-15,171;UBERON:0006601,1.51e-15,171;UBERON:0000025,3.37e-09,192;UBERON:0003076,2.13e-08,15;UBERON:0003057,2.13e-08,15;UBERON:0002420,1.03e-07,9;UBERON:0007245,1.03e-07,9;UBERON:0010009,1.03e-07,9;UBERON:0010011,1.03e-07,9;UBERON:0000454,1.03e-07,9;UBERON:0011216,1.04e-07,223;UBERON:0000125,1.27e-07,9;UBERON:0002308,1.27e-07,9;UBERON:0000200,1.71e-07,6;UBERON:0004111,1.82e-07,240;UBERON:0004732,8.76e-07,13 | |||
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| ||
|short_description=p6@VAMP2 | |||
}} | }} |
Latest revision as of 13:46, 18 September 2015
Short description: | p6@VAMP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 39bp_to_AJ225044, HQ448696_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | P63027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data