FFCP PHASE1:Hg19::chr16:15950876..15950892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q3MIV8,B1PS43,Q3MNF1,Q3MNF0,D2JYH7 | |UniProt=P35749,Q3MIV8,B1PS43,Q3MNF1,Q3MNF0,D2JYH7 | ||
|association_with_transcript=0bp_to_ENST00000300036,ENST00000338282,ENST00000396320,ENST00000396324,ENST00000452625,NM_001040113,NM_001040114,NM_002474,NM_022844,uc002ddv.2,uc002ddw.2,uc002ddx.2,uc002ddy.2,uc002deb.3,uc010bvg.2_5end | |association_with_transcript=0bp_to_ENST00000300036,ENST00000338282,ENST00000396320,ENST00000396324,ENST00000452625,NM_001040113,NM_001040114,NM_002474,NM_022844,uc002ddv.2,uc002ddw.2,uc002ddx.2,uc002ddy.2,uc002deb.3,uc010bvg.2_5end | ||
|cluster_id=chr16:15950876..15950892,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_1_at_MYH11_5end | |description=CAGE_peak_1_at_MYH11_5end | ||
|id=chr16:15950876..15950892,- | |id=chr16:15950876..15950892,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.90e-11;82!UBERON:0004872;6.26e-08;7!UBERON:0006603;1.45e-07;65!UBERON:0002532;2.79e-07;206!UBERON:0010316;2.79e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-80!115;UBERON:0001049!1.76e-28!57;UBERON:0005068!1.76e-28!57;UBERON:0006241!1.76e-28!57;UBERON:0007135!1.76e-28!57;UBERON:0002616!9.41e-23!59;UBERON:0003075!3.14e-21!86;UBERON:0007284!3.14e-21!86;UBERON:0003080!9.16e-21!42;UBERON:0002780!7.38e-20!41;UBERON:0001890!7.38e-20!41;UBERON:0006240!7.38e-20!41;UBERON:0001017!8.01e-20!82;UBERON:0002346!1.65e-19!90;UBERON:0005743!2.40e-19!86;UBERON:0000955!3.47e-19!69;UBERON:0006238!3.47e-19!69;UBERON:0000073!1.06e-17!94;UBERON:0001016!1.06e-17!94;UBERON:0000153!5.80e-16!129;UBERON:0007811!5.80e-16!129;UBERON:0001893!3.98e-15!34;UBERON:0002020!7.34e-15!34;UBERON:0003528!7.34e-15!34;UBERON:0000033!1.71e-14!123;UBERON:0002791!2.13e-14!33;UBERON:0001869!1.13e-13!32;UBERON:0003056!9.21e-13!61;UBERON:0004121!7.19e-12!169;UBERON:0002619!2.34e-11!22;UBERON:0000924!3.71e-11!173;UBERON:0006601!3.71e-11!173;UBERON:0001950!5.07e-10!20;UBERON:0000956!2.12e-09!25;UBERON:0000203!2.12e-09!25;UBERON:0000062!5.16e-09!511;UBERON:0000477!5.22e-09!286;UBERON:0003076!7.53e-09!15;UBERON:0003057!7.53e-09!15;UBERON:0004111!2.78e-08!241;UBERON:0002298!5.82e-08!8;UBERON:0000481!1.00e-07!347;UBERON:0002420!1.60e-07!9;UBERON:0007245!1.60e-07!9;UBERON:0010009!1.60e-07!9;UBERON:0010011!1.60e-07!9;UBERON:0000454!1.60e-07!9;UBERON:0004732!1.71e-07!13;UBERON:0002308!2.19e-07!9;UBERON:0000125!2.19e-07!9;UBERON:0000475!6.03e-07!365;UBERON:0000064!7.52e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!1.36e-80!115;UBERON:0001049!1.76e-28!57;UBERON:0005068!1.76e-28!57;UBERON:0006241!1.76e-28!57;UBERON:0007135!1.76e-28!57;UBERON:0002616!9.41e-23!59;UBERON:0003075!3.14e-21!86;UBERON:0007284!3.14e-21!86;UBERON:0003080!9.16e-21!42;UBERON:0002780!7.38e-20!41;UBERON:0001890!7.38e-20!41;UBERON:0006240!7.38e-20!41;UBERON:0001017!8.01e-20!82;UBERON:0002346!1.65e-19!90;UBERON:0005743!2.40e-19!86;UBERON:0000955!3.47e-19!69;UBERON:0006238!3.47e-19!69;UBERON:0000073!1.06e-17!94;UBERON:0001016!1.06e-17!94;UBERON:0000153!5.80e-16!129;UBERON:0007811!5.80e-16!129;UBERON:0001893!3.98e-15!34;UBERON:0002020!7.34e-15!34;UBERON:0003528!7.34e-15!34;UBERON:0000033!1.71e-14!123;UBERON:0002791!2.13e-14!33;UBERON:0001869!1.13e-13!32;UBERON:0003056!9.21e-13!61;UBERON:0004121!7.19e-12!169;UBERON:0002619!2.34e-11!22;UBERON:0000924!3.71e-11!173;UBERON:0006601!3.71e-11!173;UBERON:0001950!5.07e-10!20;UBERON:0000956!2.12e-09!25;UBERON:0000203!2.12e-09!25;UBERON:0000062!5.16e-09!511;UBERON:0000477!5.22e-09!286;UBERON:0003076!7.53e-09!15;UBERON:0003057!7.53e-09!15;UBERON:0004111!2.78e-08!241;UBERON:0002298!5.82e-08!8;UBERON:0000481!1.00e-07!347;UBERON:0002420!1.60e-07!9;UBERON:0007245!1.60e-07!9;UBERON:0010009!1.60e-07!9;UBERON:0010011!1.60e-07!9;UBERON:0000454!1.60e-07!9;UBERON:0004732!1.71e-07!13;UBERON:0002308!2.19e-07!9;UBERON:0000125!2.19e-07!9;UBERON:0000475!6.03e-07!365;UBERON:0000064!7.52e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.89e-24;114!UBERON:0000073;9.48e-16;53!UBERON:0002616;9.48e-16;53!UBERON:0002780;1.56e-15;41!UBERON:0001890;1.56e-15;41!UBERON:0001893;1.84e-12;34!UBERON:0002619;8.34e-12;22!UBERON:0003528;1.35e-11;34!UBERON:0002020;1.35e-11;34!UBERON:0001869;3.11e-11;32!UBERON:0002791;3.27e-11;32!UBERON:0001950;3.72e-10;20!UBERON:0000956;6.13e-10;25!UBERON:0000203;6.13e-10;25!UBERON:0000955;4.02e-09;68!UBERON:0001017;8.89e-09;75!UBERON:0001016;2.92e-08;83!UBERON:0004732;4.43e-08;13!UBERON:0001894;6.10e-08;7!UBERON:0002298;1.22e-07;6!UBERON:0011216;1.97e-07;132!UBERON:0004733;4.11e-07;12!UBERON:0002028;4.11e-07;12!UBERON:0004921;8.93e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.77e-95,114;UBERON:0001049,7.66e-29,56;UBERON:0005068,7.66e-29,56;UBERON:0006241,7.66e-29,56;UBERON:0007135,7.66e-29,56;UBERON:0000073,4.34e-26,53;UBERON:0002616,4.34e-26,53;UBERON:0003075,2.78e-22,82;UBERON:0007284,2.78e-22,82;UBERON:0001017,1.18e-20,81;UBERON:0002346,1.29e-20,86;UBERON:0002780,3.06e-20,41;UBERON:0001890,3.06e-20,41;UBERON:0003080,3.06e-20,41;UBERON:0006240,3.06e-20,41;UBERON:0000955,6.24e-20,68;UBERON:0006238,6.24e-20,68;UBERON:0010314,1.02e-18,132;UBERON:0001016,2.02e-18,89;UBERON:0011216,4.05e-18,223;UBERON:0010371,9.38e-16,104;UBERON:0001893,1.76e-14,34;UBERON:0003528,3.47e-14,34;UBERON:0002020,3.47e-14,34;UBERON:0004121,2.33e-13,171;UBERON:0000924,2.33e-13,171;UBERON:0006601,2.33e-13,171;UBERON:0003056,3.53e-13,61;UBERON:0001869,9.35e-13,32;UBERON:0002791,1.00e-12,32;UBERON:0002619,7.78e-12,22;UBERON:0001950,3.46e-10,20;UBERON:0000956,5.78e-10,25;UBERON:0000203,5.78e-10,25;UBERON:0003076,8.88e-10,15;UBERON:0003057,8.88e-10,15;UBERON:0004111,4.81e-09,240;UBERON:0004732,4.55e-08,13;UBERON:0001894,6.78e-08,7;UBERON:0006222,6.78e-08,7;UBERON:0002298,1.28e-07,6;UBERON:0004733,4.25e-07,12;UBERON:0002028,4.25e-07,12;UBERON:0007277,4.25e-07,12;UBERON:0000025,4.71e-07,192 | |||
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| ||
|short_description=p1@MYH11 | |short_description=p1@MYH11 | ||
}} | }} |
Latest revision as of 21:10, 24 September 2015
Short description: | p1@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000300036, ENST00000338282, ENST00000396320, ENST00000396324, ENST00000452625, NM_001040113, NM_001040114, NM_002474, NM_022844, uc002ddv.2, uc002ddw.2, uc002ddx.2, uc002ddy.2, uc002deb.3, uc010bvg.2_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q3MIV8B1PS43Q3MNF1Q3MNF0D2JYH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data