FFCP PHASE1:Hg19::chr18:74845649..74845670,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:74845649..74845670,-
|short_description=p10@MBP
|description=CAGE_peak_10_at_MBP_5end
|association_with_transcript=-10bp_to_ENST00000490754,ENST0000049747...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000490754,ENST00000497479_5end | |||
|cluster_id=chr18:74845649..74845670,- | |||
|coexpression_cluster_id=C1631 | |||
|description=CAGE_peak_10_at_MBP_5end | |||
|id=chr18:74845649..74845670,- | |||
|ontology_enrichment_celltype=CL:0000763!2.54e-38!112;CL:0000049!2.54e-38!112;CL:0000557!4.39e-32!71;CL:0000766!1.87e-31!76;CL:0002194!1.70e-30!63;CL:0000576!1.70e-30!63;CL:0000040!1.70e-30!63;CL:0000559!1.70e-30!63;CL:0000839!3.94e-30!70;CL:0002009!6.57e-30!65;CL:0000037!2.84e-23!172;CL:0000566!2.84e-23!172;CL:0002057!4.41e-23!42;CL:0002032!8.51e-21!165;CL:0000837!8.51e-21!165;CL:0000988!1.89e-20!182;CL:0000860!2.34e-20!45;CL:0000738!4.16e-16!140;CL:0002087!9.14e-13!119;CL:0002031!1.27e-12!124;CL:0000219!1.41e-07!390;CL:0000134!3.00e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.47e-26;39!CL:0000234;8.47e-26;39!CL:0000576;1.19e-23;48!CL:0000860;2.46e-22;33!CL:0002057;2.46e-22;33!CL:0000766;6.15e-18;69!CL:0000763;2.33e-17;100!CL:0000235;1.94e-10;6!CL:0000148;3.86e-08;10!CL:0002393;5.68e-08;6!CL:0002397;5.68e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.14e-52,108;CL:0000049,8.14e-52,108;CL:0002194,2.70e-49,59;CL:0000576,2.70e-49,59;CL:0000040,2.70e-49,59;CL:0000559,2.70e-49,59;CL:0000557,3.61e-48,67;CL:0002009,3.91e-47,61;CL:0000839,9.23e-47,66;CL:0000766,2.03e-46,72;CL:0000473,5.88e-38,48;CL:0000234,5.88e-38,48;CL:0000037,8.03e-34,168;CL:0000988,7.38e-31,177;CL:0002032,1.95e-30,161;CL:0000837,1.95e-30,161;CL:0000860,1.28e-29,42;CL:0002057,1.28e-29,42;CL:0000738,4.35e-23,136;CL:0002087,2.54e-22,115;CL:0002031,3.58e-21,120;CL:0000235,1.76e-10,6;CL:0000219,3.35e-10,386;CL:0000134,2.65e-09,354;CL:0002320,1.05e-08,361;CL:0000148,3.92e-08,10;CL:0000541,3.92e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-21;42!CL:0000049;6.49e-15;108 | |||
|ontology_enrichment_disease=DOID:8692!2.05e-09!31;DOID:1240!8.46e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.59e-12;31!DOID:1240;1.18e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.93e-13,31;DOID:1240,1.68e-11,39;DOID:2531,2.12e-07,51;DOID:0060083,2.12e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-28!80;UBERON:0002390!2.38e-28!102;UBERON:0003061!2.38e-28!102;UBERON:0001474!1.31e-25!86;UBERON:0002193!9.28e-24!112;UBERON:0004765!2.64e-20!101;UBERON:0001434!2.64e-20!101;UBERON:0002405!2.20e-16!115;UBERON:0007023!6.20e-14!115;UBERON:0002204!1.65e-11!167;UBERON:0003081!7.70e-09!216;UBERON:0002384!9.66e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-42,76;UBERON:0002390,5.37e-38,98;UBERON:0003061,5.37e-38,98;UBERON:0001474,8.26e-38,82;UBERON:0002405,5.42e-34,93;UBERON:0004765,7.03e-33,90;UBERON:0002193,1.12e-32,108;UBERON:0001434,7.48e-28,100;UBERON:0003081,2.41e-15,203;UBERON:0002204,2.74e-14,167;UBERON:0000926,1.40e-11,315;UBERON:0004120,1.40e-11,315;UBERON:0006603,1.40e-11,315;UBERON:0002384,8.51e-09,371 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.986680828671798,0,7.15137751083661,3.48935409640147,0,1.26343974685366,3.13422753839806,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0,0,0,0,0.393364276848904,1.15148819429164,1.08371286321253,0,0,0,0,0,2.64240395401362,1.66198622559563,1.40381113229099,2.38711957787437,9.62836539231675,24.6159186174424,12.6212028140751,6.97911546141911,4.53451132426571,8.00527401919793,3.0215774797739,0,3.71647645074124,2.58923153089935,4.09857130446561,1.41889337933151,2.06847408441971,2.5819387343353,1.35426486594342,4.89430082810772,2.45615535052061,3.37085226667627,3.06083892370903,1.92557416245656,3.83602275479425,3.29851300186716,2.99195486432448,4.26224750532694,0.580418477257168,0,0.622822248995575,5.52747063564835,0.521482918420201,3.69221035998698,1.81619850790011,0.736555271975129,1.89877432464531,4.64761629886272,3.18906449947565,5.45112478321777,3.36985893439485,1.80212271409808,4.018139667427,1.42506371870624,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,2.37045676297569,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.17881167947941,0,0,5.51730569212962,5.04976238167875,4.65352861816028,9.30113434790834,6.86393892936153,7.4291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,1.98788780678127,0,0.397227542439656,0,0.354668382198357,0,0,0,0.622422070799533,0,0,0.302714855289863,1.15235184896,0,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,1.61646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,14.280586353069,7.72214074959484,5.94524649154913,0,0,0,0,0,0,0.492663237895943,0.528290604079356,4.56121854189699,0,7.5745460055828,29.9075082116116,37.8168541302695,72.6748172702291,27.3715913636328,35.8867949534599,57.0651809903443,68.0266909660776,0.112131084345361,0,0,0,7.15312891703765,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0,64.4606037398309,54.7460229661018,27.4084121327941,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,0.74709290462411,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,1.92208723883551,0.511707249066704,0.160853921143607,0,0,0,0.492762936082855,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.445160178233687,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,1.116475108079,1.2655176988749,0.38126038784765,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0.75894634753143,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0,0.476463550915578,1.23408681925858,1.29694662238543,0,2.37937552888281,0.106824071127473,0,0,0,7.0691914358458,0,0.159426272728822,2.59453182862662,2.48956981172077,6.98522822988813,0.649243880549111,12.0742786588787,50.2116293873023,6.73723551824,0,13.0354668907235,4.01470187759249,5.65039180134933,2.12923118845163,2.74804275804612,3.37964840739304,6.71028323677248,7.00766395190016,3.32159762183469,0,0,2.97501246323581,0.66614393599564,0,0,5.86032717087576,0,1.5602073798847,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,1.59398390600856,2.76283915531148,0.251932747854276,0,0,0,0,0,3.5810065915881,2.86065876347107,0,0,0,0.278304294485554,0,0,0,6.52499617891314,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.438770794307945,0,0,1.76985594558733,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,4.86638794824577,0.332423363800313,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,1.85760885457012,0.611030144933625,0,0,0,0.404406797884062,3.21031058919516,0,0,0,8.98287404276143,1.18375320854817,1.20990716048664,0,1.51647791108371,0,0,1.32930774541437,0.330991955875499,0,0,0,0,0.173559738335131,0,0,3.31980669659857,0.343972064943233,0,0,0,1.06687918137261,0.441280633457501,0.90392296312213,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,10.2197270453578,0,0.525774708558629,1.67569440763353,2.29160424011684,0.717873024576814,0,0.429226048136571,0.223171457441873,1.47803639470798,0,0,0,0,0,0,0,0,0.136203406111576,0,0.412618309791701,0,0.449947783103001,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,3.57347663186684,0.662091970365432,0,0,0,0,0,1.72394293573612,0,0,0,0,0.129282956361551,0.26446520348538,0,0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| ||
|short_description=p10@MBP | |||
}} | }} |
Latest revision as of 18:34, 24 September 2015
Short description: | p10@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MBP_5end |
Coexpression cluster: | C1631_Monocytederived_Melanocyte_CD14_Macrophage_Mast_Mesenchymal_Fibroblast |
Association with transcript: | -10bp_to_ENST00000490754, ENST00000497479_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.14e-52 | 108 |
common myeloid progenitor | 8.14e-52 | 108 |
monopoietic cell | 2.70e-49 | 59 |
monocyte | 2.70e-49 | 59 |
monoblast | 2.70e-49 | 59 |
promonocyte | 2.70e-49 | 59 |
granulocyte monocyte progenitor cell | 3.61e-48 | 67 |
macrophage dendritic cell progenitor | 3.91e-47 | 61 |
myeloid lineage restricted progenitor cell | 9.23e-47 | 66 |
myeloid leukocyte | 2.03e-46 | 72 |
defensive cell | 5.88e-38 | 48 |
phagocyte | 5.88e-38 | 48 |
hematopoietic stem cell | 8.03e-34 | 168 |
hematopoietic cell | 7.38e-31 | 177 |
hematopoietic oligopotent progenitor cell | 1.95e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-30 | 161 |
classical monocyte | 1.28e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-29 | 42 |
leukocyte | 4.35e-23 | 136 |
nongranular leukocyte | 2.54e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 3.58e-21 | 120 |
macrophage | 1.76e-10 | 6 |
motile cell | 3.35e-10 | 386 |
mesenchymal cell | 2.65e-09 | 354 |
connective tissue cell | 1.05e-08 | 361 |
melanocyte | 3.92e-08 | 10 |
melanoblast | 3.92e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-42 | 76 |
hematopoietic system | 5.37e-38 | 98 |
blood island | 5.37e-38 | 98 |
bone element | 8.26e-38 | 82 |
immune system | 5.42e-34 | 93 |
skeletal element | 7.03e-33 | 90 |
hemolymphoid system | 1.12e-32 | 108 |
skeletal system | 7.48e-28 | 100 |
lateral plate mesoderm | 2.41e-15 | 203 |
musculoskeletal system | 2.74e-14 | 167 |
mesoderm | 1.40e-11 | 315 |
mesoderm-derived structure | 1.40e-11 | 315 |
presumptive mesoderm | 1.40e-11 | 315 |
connective tissue | 8.51e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.93e-13 | 31 |
leukemia | 1.68e-11 | 39 |
hematologic cancer | 2.12e-07 | 51 |
immune system cancer | 2.12e-07 | 51 |