FFCP PHASE1:Hg19::chr1:17944806..17944819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55160 | |EntrezGene=55160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |HGNC=25540 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VXI4 | |UniProt=Q5VXI4 | ||
|association_with_transcript=0bp_to_ENST00000375408,uc001bar.2,uc010ocs.1_5end | |association_with_transcript=0bp_to_ENST00000375408,uc001bar.2,uc010ocs.1_5end | ||
|cluster_id=chr1:17944806..17944819,+ | |||
|coexpression_cluster_id=C392 | |coexpression_cluster_id=C392 | ||
|description=CAGE_peak_10_at_ARHGEF10L_5end | |description=CAGE_peak_10_at_ARHGEF10L_5end | ||
|id=chr1:17944806..17944819,+ | |id=chr1:17944806..17944819,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.60e-55!42;CL:0002194!1.30e-53!63;CL:0000576!1.30e-53!63;CL:0000040!1.30e-53!63;CL:0000559!1.30e-53!63;CL:0002009!2.71e-53!65;CL:0000860!2.32e-50!45;CL:0000557!4.11e-47!71;CL:0000839!2.69e-46!70;CL:0000766!1.01e-44!76;CL:0002087!1.08e-25!119;CL:0000763!4.01e-25!112;CL:0000049!4.01e-25!112;CL:0000738!1.20e-21!140;CL:0002031!1.24e-21!124;CL:0000037!4.84e-14!172;CL:0000566!4.84e-14!172;CL:0002032!3.16e-13!165;CL:0000837!3.16e-13!165;CL:0000988!6.53e-13!182;CL:0002393!7.67e-12!9;CL:0002397!7.67e-12!9 | |ontology_enrichment_celltype=CL:0002057!3.60e-55!42;CL:0002194!1.30e-53!63;CL:0000576!1.30e-53!63;CL:0000040!1.30e-53!63;CL:0000559!1.30e-53!63;CL:0002009!2.71e-53!65;CL:0000860!2.32e-50!45;CL:0000557!4.11e-47!71;CL:0000839!2.69e-46!70;CL:0000766!1.01e-44!76;CL:0002087!1.08e-25!119;CL:0000763!4.01e-25!112;CL:0000049!4.01e-25!112;CL:0000738!1.20e-21!140;CL:0002031!1.24e-21!124;CL:0000037!4.84e-14!172;CL:0000566!4.84e-14!172;CL:0002032!3.16e-13!165;CL:0000837!3.16e-13!165;CL:0000988!6.53e-13!182;CL:0002393!7.67e-12!9;CL:0002397!7.67e-12!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.08e-92;33!CL:0002057;4.08e-92;33!CL:0000473;6.55e-89;39!CL:0000234;6.55e-89;39!CL:0000576;8.27e-75;48!CL:0000766;1.76e-45;69!CL:0000763;7.67e-20;100!CL:0002393;1.34e-19;6!CL:0002397;1.34e-19;6!CL:0002087;3.38e-17;104!CL:0000235;1.12e-14;6!CL:0000738;9.17e-14;136!CL:0002619;1.03e-11;3!CL:0000988;1.05e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.04e-125,48;CL:0000234,2.04e-125,48;CL:0002194,5.95e-119,59;CL:0000576,5.95e-119,59;CL:0000040,5.95e-119,59;CL:0000559,5.95e-119,59;CL:0002009,9.26e-115,61;CL:0000860,1.49e-111,42;CL:0002057,1.49e-111,42;CL:0000839,2.25e-105,66;CL:0000557,1.16e-103,67;CL:0000766,8.30e-96,72;CL:0002087,1.75e-61,115;CL:0000763,1.63e-60,108;CL:0000049,1.63e-60,108;CL:0002031,2.06e-53,120;CL:0000738,2.51e-50,136;CL:0000037,1.18e-38,168;CL:0002032,4.37e-37,161;CL:0000837,4.37e-37,161;CL:0000988,3.98e-36,177;CL:0000134,6.89e-16,354;CL:0002320,2.37e-15,361;CL:0000235,1.53e-14,6;CL:0000219,1.82e-13,386;CL:0002393,4.30e-13,9;CL:0002397,4.30e-13,9;CL:0000048,1.06e-12,427;CL:0000723,2.33e-12,433;CL:0000034,6.45e-12,441;CL:0002619,1.21e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-80;42!CL:0000049;1.88e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.65e-45!102;UBERON:0003061!2.65e-45!102;UBERON:0002193!1.48e-43!112;UBERON:0002371!3.33e-43!80;UBERON:0001474!8.88e-39!86;UBERON:0004765!8.72e-34!101;UBERON:0001434!8.72e-34!101;UBERON:0002405!6.33e-32!115;UBERON:0002204!5.55e-29!167;UBERON:0003081!1.49e-26!216;UBERON:0000926!2.82e-12!448;UBERON:0004120!2.82e-12!448;UBERON:0006603!2.82e-12!448;UBERON:0007023!8.20e-10!115;UBERON:0000467!1.96e-09!625;UBERON:0000480!2.34e-09!626;UBERON:0000468!8.78e-09!659;UBERON:0000923!2.29e-07!604;UBERON:0005291!2.29e-07!604;UBERON:0006598!2.29e-07!604;UBERON:0002532!2.29e-07!604;UBERON:0002050!2.67e-07!605;UBERON:0005423!2.67e-07!605;UBERON:0000922!7.82e-07!612 | |ontology_enrichment_uberon=UBERON:0002390!2.65e-45!102;UBERON:0003061!2.65e-45!102;UBERON:0002193!1.48e-43!112;UBERON:0002371!3.33e-43!80;UBERON:0001474!8.88e-39!86;UBERON:0004765!8.72e-34!101;UBERON:0001434!8.72e-34!101;UBERON:0002405!6.33e-32!115;UBERON:0002204!5.55e-29!167;UBERON:0003081!1.49e-26!216;UBERON:0000926!2.82e-12!448;UBERON:0004120!2.82e-12!448;UBERON:0006603!2.82e-12!448;UBERON:0007023!8.20e-10!115;UBERON:0000467!1.96e-09!625;UBERON:0000480!2.34e-09!626;UBERON:0000468!8.78e-09!659;UBERON:0000923!2.29e-07!604;UBERON:0005291!2.29e-07!604;UBERON:0006598!2.29e-07!604;UBERON:0002532!2.29e-07!604;UBERON:0002050!2.67e-07!605;UBERON:0005423!2.67e-07!605;UBERON:0000922!7.82e-07!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.52e-94,76;UBERON:0001474,1.44e-86,82;UBERON:0002390,8.03e-84,98;UBERON:0003061,8.03e-84,98;UBERON:0004765,5.62e-78,90;UBERON:0002405,3.93e-75,93;UBERON:0002193,4.46e-75,108;UBERON:0001434,3.76e-69,100;UBERON:0002204,7.86e-41,167;UBERON:0003081,7.78e-40,203;UBERON:0000926,8.87e-24,315;UBERON:0004120,8.87e-24,315;UBERON:0006603,8.87e-24,315;UBERON:0002384,1.27e-14,371;UBERON:0000923,3.27e-09,560;UBERON:0010316,3.27e-09,560;UBERON:0005291,3.27e-09,560;UBERON:0006598,3.27e-09,560;UBERON:0010317,3.27e-09,560;UBERON:0002532,3.27e-09,560;UBERON:0002050,4.66e-09,564;UBERON:0005423,1.98e-08,581;UBERON:0000922,4.86e-08,592 | |||
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| ||
|short_description=p10@ARHGEF10L | |short_description=p10@ARHGEF10L | ||
}} | }} |
Latest revision as of 22:27, 18 September 2015
Short description: | p10@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARHGEF10L_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 0bp_to_ENST00000375408, uc001bar.2, uc010ocs.1_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | Q5VXI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.52e-94 | 76 |
bone element | 1.44e-86 | 82 |
hematopoietic system | 8.03e-84 | 98 |
blood island | 8.03e-84 | 98 |
skeletal element | 5.62e-78 | 90 |
immune system | 3.93e-75 | 93 |
hemolymphoid system | 4.46e-75 | 108 |
skeletal system | 3.76e-69 | 100 |
musculoskeletal system | 7.86e-41 | 167 |
lateral plate mesoderm | 7.78e-40 | 203 |
mesoderm | 8.87e-24 | 315 |
mesoderm-derived structure | 8.87e-24 | 315 |
presumptive mesoderm | 8.87e-24 | 315 |
connective tissue | 1.27e-14 | 371 |
germ layer | 3.27e-09 | 560 |
germ layer / neural crest | 3.27e-09 | 560 |
embryonic tissue | 3.27e-09 | 560 |
presumptive structure | 3.27e-09 | 560 |
germ layer / neural crest derived structure | 3.27e-09 | 560 |
epiblast (generic) | 3.27e-09 | 560 |
embryonic structure | 4.66e-09 | 564 |
developing anatomical structure | 1.98e-08 | 581 |
embryo | 4.86e-08 | 592 |