FFCP PHASE1:Hg19::chr2:171673254..171673269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2571 | |EntrezGene=2571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4092 | |HGNC=4092 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVA8,Q99259 | |UniProt=Q8IVA8,Q99259 | ||
|association_with_transcript=54bp_to_ENST00000375272,NM_000817,NM_013445,uc002ugh.2,uc002ugi.2_5end | |association_with_transcript=54bp_to_ENST00000375272,NM_000817,NM_013445,uc002ugh.2,uc002ugi.2_5end | ||
|cluster_id=chr2:171673254..171673269,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_2_at_GAD1_5end | |description=CAGE_peak_2_at_GAD1_5end | ||
|id=chr2:171673254..171673269,+ | |id=chr2:171673254..171673269,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.19e-10;2!CL:0000540;7.46e-07;6!CL:0000404;7.46e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.50e-13,8;CL:0000540,7.31e-07,6;CL:0000031,7.31e-07,6;CL:0000404,7.31e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-10;82!CL:0000031;7.46e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.98e-12!106;DOID:0050687!3.88e-09!143 | |ontology_enrichment_disease=DOID:305!2.98e-12!106;DOID:0050687!3.88e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;5.71e-69;22!UBERON:0001950;9.36e-69;20!UBERON:0001869;9.92e-65;32!UBERON:0000956;1.97e-60;25!UBERON:0000203;1.97e-60;25!UBERON:0002791;6.87e-60;32!UBERON:0003528;8.96e-60;34!UBERON:0002020;8.96e-60;34!UBERON:0001893;2.43e-58;34!UBERON:0002780;4.01e-46;41!UBERON:0001890;4.01e-46;41!UBERON:0000073;5.02e-33;53!UBERON:0002616;5.02e-33;53!UBERON:0001017;6.38e-27;75!UBERON:0000955;2.09e-26;68!UBERON:0000200;6.85e-25;6!UBERON:0001872;1.75e-21;5!UBERON:0001016;1.80e-21;83!UBERON:0001871;2.83e-21;6!UBERON:0002420;5.95e-16;9!UBERON:0007245;5.95e-16;9!UBERON:0010009;5.95e-16;9!UBERON:0010011;5.95e-16;9!UBERON:0000454;5.95e-16;9!UBERON:0002021;5.59e-14;5!UBERON:0000349;2.42e-13;5!UBERON:0001870;2.74e-13;3!UBERON:0000125;3.61e-11;9!UBERON:0002308;3.61e-11;9!UBERON:0000369;6.60e-10;4!UBERON:0002435;6.60e-10;4!UBERON:0000204;6.60e-10;4!UBERON:0011216;8.01e-10;132!UBERON:0009663;1.20e-09;7!UBERON:0002771;3.12e-09;2!UBERON:0002702;3.12e-09;2!UBERON:0001876;3.76e-09;2!UBERON:0007023;9.00e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.21e-74,32;UBERON:0001893,1.27e-69,34;UBERON:0003528,3.74e-69,34;UBERON:0002020,3.74e-69,34;UBERON:0002619,4.28e-69,22;UBERON:0001950,7.92e-69,20;UBERON:0002791,5.33e-68,32;UBERON:0002780,1.74e-66,41;UBERON:0001890,1.74e-66,41;UBERON:0003080,1.74e-66,41;UBERON:0006240,1.74e-66,41;UBERON:0001017,7.03e-65,81;UBERON:0000956,1.53e-60,25;UBERON:0000203,1.53e-60,25;UBERON:0000073,3.63e-58,53;UBERON:0002616,3.63e-58,53;UBERON:0001016,1.05e-57,89;UBERON:0001049,9.83e-55,56;UBERON:0005068,9.83e-55,56;UBERON:0006241,9.83e-55,56;UBERON:0007135,9.83e-55,56;UBERON:0000955,8.87e-54,68;UBERON:0006238,8.87e-54,68;UBERON:0003056,6.85e-43,61;UBERON:0003075,2.21e-35,82;UBERON:0007284,2.21e-35,82;UBERON:0002346,1.96e-33,86;UBERON:0010371,1.68e-26,104;UBERON:0004121,1.71e-26,171;UBERON:0000924,1.71e-26,171;UBERON:0006601,1.71e-26,171;UBERON:0000200,6.06e-25,6;UBERON:0011216,7.06e-24,223;UBERON:0007023,1.29e-23,114;UBERON:0001872,1.65e-21,5;UBERON:0001871,2.99e-21,6;UBERON:0010314,4.12e-21,132;UBERON:0002420,5.14e-16,9;UBERON:0007245,5.14e-16,9;UBERON:0010009,5.14e-16,9;UBERON:0010011,5.14e-16,9;UBERON:0000454,5.14e-16,9;UBERON:0002021,5.33e-14,5;UBERON:0000349,1.93e-13,5;UBERON:0001870,2.32e-13,3;UBERON:0000025,2.52e-12,192;UBERON:0000125,3.74e-11,9;UBERON:0002308,3.74e-11,9;UBERON:0000369,6.02e-10,4;UBERON:0002435,6.02e-10,4;UBERON:0000204,6.02e-10,4;UBERON:0010082,6.02e-10,4;UBERON:0009663,1.15e-09,7;UBERON:0002702,2.75e-09,2;UBERON:0001876,3.25e-09,2;UBERON:0002771,3.53e-09,2;UBERON:0004111,1.60e-08,240 | |||
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| ||
|short_description=p2@GAD1 | |short_description=p2@GAD1 | ||
}} | }} |
Latest revision as of 03:35, 18 September 2015
Short description: | p2@GAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GAD1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 54bp_to_ENST00000375272, NM_000817, NM_013445, uc002ugh.2, uc002ugi.2_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | Q8IVA8Q99259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.50e-13 | 8 |
neuron | 7.31e-07 | 6 |
neuroblast | 7.31e-07 | 6 |
electrically signaling cell | 7.31e-07 | 6 |