FFCP PHASE1:Hg19::chr2:71299438..71299449,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55577 | |EntrezGene=55577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17174 | |HGNC=17174 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000478659_5end | |association_with_transcript=23bp_to_ENST00000478659_5end | ||
|cluster_id=chr2:71299438..71299449,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_12_at_NAGK_5end | |description=CAGE_peak_12_at_NAGK_5end | ||
|id=chr2:71299438..71299449,+ | |id=chr2:71299438..71299449,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.92e-79!42;CL:0000766!8.02e-74!76;CL:0000860!8.42e-73!45;CL:0002194!3.72e-71!63;CL:0000576!3.72e-71!63;CL:0000040!3.72e-71!63;CL:0000559!3.72e-71!63;CL:0002009!1.21e-68!65;CL:0000839!5.48e-63!70;CL:0000557!5.97e-62!71;CL:0000763!1.03e-57!112;CL:0000049!1.03e-57!112;CL:0000738!7.59e-54!140;CL:0002032!4.97e-53!165;CL:0000837!4.97e-53!165;CL:0002087!1.03e-52!119;CL:0000037!2.72e-50!172;CL:0000566!2.72e-50!172;CL:0002031!4.51e-50!124;CL:0000988!9.63e-47!182;CL:0002393!8.36e-20!9;CL:0002397!8.36e-20!9;CL:0000134!1.21e-16!358;CL:0002320!4.79e-16!365;CL:0000219!6.08e-14!390;CL:0000048!3.87e-12!430;CL:0000723!9.02e-12!436;CL:0000034!2.69e-11!444;CL:0000875!8.99e-10!3;CL:0002396!8.99e-10!3;CL:0000094!2.62e-09!8;CL:0000945!5.47e-09!24;CL:0000826!5.47e-09!24;CL:0000771!1.82e-07!2 | |ontology_enrichment_celltype=CL:0002057!9.92e-79!42;CL:0000766!8.02e-74!76;CL:0000860!8.42e-73!45;CL:0002194!3.72e-71!63;CL:0000576!3.72e-71!63;CL:0000040!3.72e-71!63;CL:0000559!3.72e-71!63;CL:0002009!1.21e-68!65;CL:0000839!5.48e-63!70;CL:0000557!5.97e-62!71;CL:0000763!1.03e-57!112;CL:0000049!1.03e-57!112;CL:0000738!7.59e-54!140;CL:0002032!4.97e-53!165;CL:0000837!4.97e-53!165;CL:0002087!1.03e-52!119;CL:0000037!2.72e-50!172;CL:0000566!2.72e-50!172;CL:0002031!4.51e-50!124;CL:0000988!9.63e-47!182;CL:0002393!8.36e-20!9;CL:0002397!8.36e-20!9;CL:0000134!1.21e-16!358;CL:0002320!4.79e-16!365;CL:0000219!6.08e-14!390;CL:0000048!3.87e-12!430;CL:0000723!9.02e-12!436;CL:0000034!2.69e-11!444;CL:0000875!8.99e-10!3;CL:0002396!8.99e-10!3;CL:0000094!2.62e-09!8;CL:0000945!5.47e-09!24;CL:0000826!5.47e-09!24;CL:0000771!1.82e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-53;33!CL:0002057;1.71e-53;33!CL:0000576;4.79e-42;48!CL:0000473;1.79e-35;39!CL:0000234;1.79e-35;39!CL:0000766;6.42e-26;69!CL:0000771;3.75e-18;2!CL:0000763;8.99e-17;100!CL:0002087;7.32e-15;104!CL:0002393;5.08e-13;6!CL:0002397;5.08e-13;6!CL:0000875;5.89e-12;3!CL:0002396;5.89e-12;3!CL:0000094;3.74e-10;8!CL:0000738;1.20e-09;136!CL:0000081;1.64e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-83,42;CL:0002057,1.30e-83,42;CL:0000473,8.96e-73,48;CL:0000234,8.96e-73,48;CL:0000766,3.95e-62,72;CL:0002194,1.36e-57,59;CL:0000576,1.36e-57,59;CL:0000040,1.36e-57,59;CL:0000559,1.36e-57,59;CL:0002009,1.24e-55,61;CL:0000839,3.03e-51,66;CL:0000557,1.91e-50,67;CL:0000763,1.60e-40,108;CL:0000049,1.60e-40,108;CL:0000738,1.50e-31,136;CL:0002087,3.20e-28,115;CL:0002031,6.44e-27,120;CL:0002032,3.76e-26,161;CL:0000837,3.76e-26,161;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0002393,7.84e-23,9;CL:0002397,7.84e-23,9;CL:0000771,3.16e-18,2;CL:0000875,4.46e-12,3;CL:0002396,4.46e-12,3;CL:0000094,3.86e-10,8;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000081,1.67e-07,11;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-56;42!CL:0000049;5.84e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.02e-54!80;UBERON:0001474!2.92e-49!86;UBERON:0002390!6.49e-49!102;UBERON:0003061!6.49e-49!102;UBERON:0002193!1.52e-45!112;UBERON:0004765!2.58e-40!101;UBERON:0001434!2.58e-40!101;UBERON:0002405!8.17e-40!115;UBERON:0002204!4.95e-20!167;UBERON:0003081!6.97e-19!216;UBERON:0002384!3.13e-15!375 | |ontology_enrichment_uberon=UBERON:0002371!9.02e-54!80;UBERON:0001474!2.92e-49!86;UBERON:0002390!6.49e-49!102;UBERON:0003061!6.49e-49!102;UBERON:0002193!1.52e-45!112;UBERON:0004765!2.58e-40!101;UBERON:0001434!2.58e-40!101;UBERON:0002405!8.17e-40!115;UBERON:0002204!4.95e-20!167;UBERON:0003081!6.97e-19!216;UBERON:0002384!3.13e-15!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-44,76;UBERON:0001474,9.53e-41,82;UBERON:0004765,7.03e-37,90;UBERON:0002405,1.34e-35,93;UBERON:0002390,1.23e-33,98;UBERON:0003061,1.23e-33,98;UBERON:0001434,6.65e-33,100;UBERON:0002193,3.02e-30,108;UBERON:0002204,1.93e-18,167;UBERON:0003081,1.41e-14,203;UBERON:0002384,2.45e-09,371;UBERON:0000926,3.82e-08,315;UBERON:0004120,3.82e-08,315;UBERON:0006603,3.82e-08,315 | |||
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| ||
|short_description=p12@NAGK | |short_description=p12@NAGK | ||
}} | }} |
Latest revision as of 07:30, 18 September 2015
Short description: | p12@NAGK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NAGK_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 23bp_to_ENST00000478659_5end |
EntrezGene: | NAGK |
HGNC: | 17174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.57e-44 | 76 |
bone element | 9.53e-41 | 82 |
skeletal element | 7.03e-37 | 90 |
immune system | 1.34e-35 | 93 |
hematopoietic system | 1.23e-33 | 98 |
blood island | 1.23e-33 | 98 |
skeletal system | 6.65e-33 | 100 |
hemolymphoid system | 3.02e-30 | 108 |
musculoskeletal system | 1.93e-18 | 167 |
lateral plate mesoderm | 1.41e-14 | 203 |
connective tissue | 2.45e-09 | 371 |
mesoderm | 3.82e-08 | 315 |
mesoderm-derived structure | 3.82e-08 | 315 |
presumptive mesoderm | 3.82e-08 | 315 |