FFCP PHASE1:Hg19::chr2:85628691..85628713,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=822 | |EntrezGene=822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1474 | |HGNC=1474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=80bp_to_ENST00000483659_5end | |association_with_transcript=80bp_to_ENST00000483659_5end | ||
|cluster_id=chr2:85628691..85628713,- | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_9_at_CAPG_5end | |description=CAGE_peak_9_at_CAPG_5end | ||
|id=chr2:85628691..85628713,- | |id=chr2:85628691..85628713,- | ||
|ontology_enrichment_celltype=CL:0000557!5.07e-17!71;CL:0000839!1.15e-16!70;CL:0002194!3.68e-15!63;CL:0000576!3.68e-15!63;CL:0000040!3.68e-15!63;CL:0000559!3.68e-15!63;CL:0002009!5.11e-15!65;CL:0000766!6.24e-15!76;CL:0000763!6.59e-12!112;CL:0000049!6.59e-12!112;CL:0000860!3.34e-10!45;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000144!1.36e-09!625;CL:0002057!1.57e-09!42;CL:0002371!2.24e-09!591;CL:0000063!2.79e-09!578;CL:0000012!2.87e-09!682;CL:0000003!3.30e-07!722 | |ontology_enrichment_celltype=CL:0000557!5.07e-17!71;CL:0000839!1.15e-16!70;CL:0002194!3.68e-15!63;CL:0000576!3.68e-15!63;CL:0000040!3.68e-15!63;CL:0000559!3.68e-15!63;CL:0002009!5.11e-15!65;CL:0000766!6.24e-15!76;CL:0000763!6.59e-12!112;CL:0000049!6.59e-12!112;CL:0000860!3.34e-10!45;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000144!1.36e-09!625;CL:0002057!1.57e-09!42;CL:0002371!2.24e-09!591;CL:0000063!2.79e-09!578;CL:0000012!2.87e-09!682;CL:0000003!3.30e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.67e-28;6!CL:0000473;2.77e-10;39!CL:0000234;2.77e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.06e-28,6;CL:0000839,8.59e-12,66;CL:0002194,1.02e-11,59;CL:0000576,1.02e-11,59;CL:0000040,1.02e-11,59;CL:0000559,1.02e-11,59;CL:0000557,1.43e-11,67;CL:0002009,3.07e-11,61;CL:0000766,1.50e-10,72;CL:0000473,3.16e-09,48;CL:0000234,3.16e-09,48;CL:0000763,5.96e-07,108;CL:0000049,5.96e-07,108;CL:0002328,6.01e-07,3;CL:0002577,8.30e-07,3;CL:0000135,9.60e-07,3;CL:0000388,9.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.82e-14;3!DOID:127;5.82e-14;3!DOID:0060072;1.37e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.92e-14,3;DOID:127,1.92e-14,3;DOID:0060072,6.00e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.88e-15!80;UBERON:0001474!4.39e-13!86;UBERON:0004765!1.48e-12!101;UBERON:0001434!1.48e-12!101;UBERON:0002390!2.54e-09!102;UBERON:0003061!2.54e-09!102;UBERON:0002204!1.13e-08!167;UBERON:0002193!6.22e-08!112;UBERON:0002405!1.71e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!1.88e-15!80;UBERON:0001474!4.39e-13!86;UBERON:0004765!1.48e-12!101;UBERON:0001434!1.48e-12!101;UBERON:0002390!2.54e-09!102;UBERON:0003061!2.54e-09!102;UBERON:0002204!1.13e-08!167;UBERON:0002193!6.22e-08!112;UBERON:0002405!1.71e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.88e-10,76;UBERON:0001474,6.96e-09,82;UBERON:0004765,8.04e-08,90;UBERON:0001434,8.47e-08,100;UBERON:0002405,1.80e-07,93;UBERON:0004815,6.01e-07,3;UBERON:0002031,6.01e-07,3;UBERON:0002390,6.18e-07,98;UBERON:0003061,6.18e-07,98;UBERON:0007846,9.60e-07,3;UBERON:0000043,9.60e-07,3;UBERON:0007845,9.60e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0.655324116390517,0.791300934685361,0.495065411840187,0.662794751455832,2.01697543935533,0,0,0,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0.251085279189606,0.152826811495903,0,0,0,0,0,0.919421224478927,1.8072355126695,1.47901604066715,0,0,0,0,0.601633342410425,0.651032612147555,2.68698569087909,0.32389366601898,0.257575567634187,0.581592955118259,0,0.485168122375632,1.16214518452842,0,0.619412741790207,0.863077176966451,0.512321413058201,0.236482229888585,1.03423704220986,0,0,2.07066573496865,0.272906150057846,1.12361742222542,0.306083892370903,0.320929027076094,1.27867425159808,0.329851300186716,0.398927315243264,0.852449501065388,0,0,0,0.75374599577023,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0.422510572623884,0.425208599930087,0,0.22465726229299,0.750884464207532,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0,0.728590576585084,0,1.62273696827342,0.174129737299267,1.99436940778298,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.597794722207204,0.23486899728753,0.161872944368132,0.140450806702248,0,0.491337269247072,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.545492241181669,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0.548751427043128,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,2.70838706696137,1.8720341211139,6.24250881612659,0.93733833986777,0.16798212819886,0,0,0,0,0.492663237895943,0.528290604079356,1.24396869324463,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0.199945982364114,6.08118903205952,4.52031382288914,18.9750545534728,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0.173767228936166,0,1.02943027143257,0,0.215714200818617,0,0.303127571446259,1.66435439510497,1.20956117331872,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.464841513839837,0,1.00253235151642,0.184161977871793,0,0.364182336013434,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0.431831832204279,0,0,0,0,4.15538004464362,0.671624264166535,0,0,0,0.328014645699706,0,0,0,0,0,1.30012049207304,0,0,0,0.307007349452259,0.275673144969061,0.214840489736547,0.725083469571143,0.170453254832202,0,0.330569830721956,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,1.15755106853338,0,0,0,0,0,0,0,0.709522128141196,1.26664581178598,0,0,0,0.288666338176536,3.35151137767894,0,0,0.43050537267123,0,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.318852545457645,0.399158742865633,0.191505370132367,1.05836791361941,0,0.561594356226918,0,0.156679895773023,0,0,0.1605880751037,0,0.425846237690326,0,0.614481528616916,0,0,0.586164286206121,0,0,0,0,0,0,0.293016358543788,0,0,0.568272293612826,0.47748896947538,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0.638002319463839,0,0.533034776018635,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.328461828212837,0.193978032976839,0,0,0.137041924646751,0,0.126621591911757,0.391102765469606,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,2.71499800876856,1.72844298240254,1.63293680054705,1.19730191562487,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0.11092905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| ||
|short_description=p9@CAPG | |short_description=p9@CAPG | ||
}} | }} |
Latest revision as of 16:06, 18 September 2015
Short description: | p9@CAPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CAPG_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 80bp_to_ENST00000483659_5end |
EntrezGene: | CAPG |
HGNC: | 1474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.06e-28 | 6 |
myeloid lineage restricted progenitor cell | 8.59e-12 | 66 |
monopoietic cell | 1.02e-11 | 59 |
monocyte | 1.02e-11 | 59 |
monoblast | 1.02e-11 | 59 |
promonocyte | 1.02e-11 | 59 |
granulocyte monocyte progenitor cell | 1.43e-11 | 67 |
macrophage dendritic cell progenitor | 3.07e-11 | 61 |
myeloid leukocyte | 1.50e-10 | 72 |
defensive cell | 3.16e-09 | 48 |
phagocyte | 3.16e-09 | 48 |
myeloid cell | 5.96e-07 | 108 |
common myeloid progenitor | 5.96e-07 | 108 |
bronchial epithelial cell | 6.01e-07 | 3 |
placental epithelial cell | 8.30e-07 | 3 |
fibrocyte | 9.60e-07 | 3 |
tendon cell | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.88e-10 | 76 |
bone element | 6.96e-09 | 82 |
skeletal element | 8.04e-08 | 90 |
skeletal system | 8.47e-08 | 100 |
immune system | 1.80e-07 | 93 |
lower respiratory tract epithelium | 6.01e-07 | 3 |
epithelium of bronchus | 6.01e-07 | 3 |
hematopoietic system | 6.18e-07 | 98 |
blood island | 6.18e-07 | 98 |
dense regular connective tissue | 9.60e-07 | 3 |
tendon | 9.60e-07 | 3 |
regular connective tissue | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.92e-14 | 3 |
leiomyoma | 1.92e-14 | 3 |
benign neoplasm | 6.00e-11 | 4 |