FFCP PHASE1:Hg19::chr3:178137042..178137098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41353 | |HGNC=41353 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000441018_5end | |association_with_transcript=0bp_to_ENST00000441018_5end | ||
|cluster_id=chr3:178137042..178137098,+ | |||
|coexpression_cluster_id=C76 | |coexpression_cluster_id=C76 | ||
|description=CAGE_peak_1_at_KCNMB2-IT1_5end | |description=CAGE_peak_1_at_KCNMB2-IT1_5end | ||
|id=chr3:178137042..178137098,+ | |id=chr3:178137042..178137098,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;6.24e-07;1!CL:0000167;7.19e-07;1!CL:0000164;7.19e-07;1!CL:0000502;7.19e-07;1!CL:0000172;7.19e-07;1!CL:0000173;7.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,5.89e-07,1;CL:0000167,7.39e-07,1;CL:0000164,7.39e-07,1;CL:0000502,7.39e-07,1;CL:0000172,7.39e-07,1;CL:0000173,7.39e-07,1;CL:0002351,7.39e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.19e-12;2!UBERON:0008947;2.60e-08;29!UBERON:0001041;4.29e-08;30!CL:0002351;7.19e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;7.19e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.39e-07,1;DOID:0050619,9.25e-07,1;DOID:1357,9.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-21!115;UBERON:0001049!1.76e-13!57;UBERON:0005068!1.76e-13!57;UBERON:0006241!1.76e-13!57;UBERON:0007135!1.76e-13!57;UBERON:0002616!9.02e-13!59;UBERON:0005743!1.10e-10!86;UBERON:0001017!1.35e-10!82;UBERON:0000073!7.27e-10!94;UBERON:0001016!7.27e-10!94;UBERON:0000955!9.52e-10!69;UBERON:0006238!9.52e-10!69;UBERON:0003075!3.84e-09!86;UBERON:0007284!3.84e-09!86;UBERON:0002780!1.52e-08!41;UBERON:0001890!1.52e-08!41;UBERON:0006240!1.52e-08!41;UBERON:0002346!1.98e-08!90;UBERON:0003080!3.01e-08!42;UBERON:0001896!4.05e-07!3;UBERON:0005290!4.05e-07!3;UBERON:0010096!4.05e-07!3;UBERON:0003076!4.35e-07!15;UBERON:0003057!4.35e-07!15;UBERON:0001894!6.91e-07!7;UBERON:0006222!6.91e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.61e-21!115;UBERON:0001049!1.76e-13!57;UBERON:0005068!1.76e-13!57;UBERON:0006241!1.76e-13!57;UBERON:0007135!1.76e-13!57;UBERON:0002616!9.02e-13!59;UBERON:0005743!1.10e-10!86;UBERON:0001017!1.35e-10!82;UBERON:0000073!7.27e-10!94;UBERON:0001016!7.27e-10!94;UBERON:0000955!9.52e-10!69;UBERON:0006238!9.52e-10!69;UBERON:0003075!3.84e-09!86;UBERON:0007284!3.84e-09!86;UBERON:0002780!1.52e-08!41;UBERON:0001890!1.52e-08!41;UBERON:0006240!1.52e-08!41;UBERON:0002346!1.98e-08!90;UBERON:0003080!3.01e-08!42;UBERON:0001896!4.05e-07!3;UBERON:0005290!4.05e-07!3;UBERON:0010096!4.05e-07!3;UBERON:0003076!4.35e-07!15;UBERON:0003057!4.35e-07!15;UBERON:0001894!6.91e-07!7;UBERON:0006222!6.91e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;5.22e-15;6!UBERON:0000007;1.36e-12;2!UBERON:0001873;4.19e-12;2!UBERON:0002148;8.58e-12;2!UBERON:0006331;8.58e-12;2!UBERON:0009662;8.58e-12;2!UBERON:0000341;1.48e-11;2!UBERON:0005162;2.53e-11;2!UBERON:0000122;2.53e-11;2!UBERON:0004732;2.44e-10;13!UBERON:0000125;6.36e-10;9!UBERON:0002308;6.36e-10;9!UBERON:0001896;1.52e-08;3!UBERON:0005290;1.52e-08;3!UBERON:0002048;2.27e-08;22!UBERON:0000117;2.27e-08;22!UBERON:0000171;2.27e-08;22!UBERON:0000170;2.27e-08;22!UBERON:0005383;2.37e-08;3!UBERON:0005382;2.37e-08;3!UBERON:0000073;3.15e-08;53!UBERON:0002616;3.15e-08;53!UBERON:0000988;3.80e-08;3!UBERON:0001894;1.03e-07;7!UBERON:0004733;1.49e-07;12!UBERON:0002028;1.49e-07;12!UBERON:0001301;5.41e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,6.26e-15,6;UBERON:0007023,1.42e-14,114;UBERON:0000007,1.36e-12,2;UBERON:0000073,2.96e-12,53;UBERON:0002616,2.96e-12,53;UBERON:0001873,5.23e-12,2;UBERON:0010122,5.23e-12,2;UBERON:0002148,1.07e-11,2;UBERON:0006331,1.07e-11,2;UBERON:0009662,1.07e-11,2;UBERON:0001049,1.74e-11,56;UBERON:0005068,1.74e-11,56;UBERON:0006241,1.74e-11,56;UBERON:0007135,1.74e-11,56;UBERON:0000341,1.94e-11,2;UBERON:0005162,2.53e-11,2;UBERON:0000122,2.53e-11,2;UBERON:0004732,2.78e-10,13;UBERON:0000125,7.67e-10,9;UBERON:0002308,7.67e-10,9;UBERON:0000955,6.43e-09,68;UBERON:0006238,6.43e-09,68;UBERON:0011216,1.15e-08,223;UBERON:0001896,1.58e-08,3;UBERON:0005290,1.58e-08,3;UBERON:0010096,1.58e-08,3;UBERON:0003075,1.79e-08,82;UBERON:0007284,1.79e-08,82;UBERON:0002048,2.21e-08,22;UBERON:0000117,2.21e-08,22;UBERON:0000171,2.21e-08,22;UBERON:0000170,2.21e-08,22;UBERON:0005597,2.21e-08,22;UBERON:0000118,2.21e-08,22;UBERON:0005383,2.74e-08,3;UBERON:0005382,2.74e-08,3;UBERON:0000988,4.39e-08,3;UBERON:0002346,5.73e-08,86;UBERON:0001894,9.54e-08,7;UBERON:0006222,9.54e-08,7;UBERON:0004733,1.63e-07,12;UBERON:0002028,1.63e-07,12;UBERON:0007277,1.63e-07,12;UBERON:0001016,2.12e-07,89;UBERON:0002780,3.38e-07,41;UBERON:0001890,3.38e-07,41;UBERON:0003080,3.38e-07,41;UBERON:0006240,3.38e-07,41;UBERON:0001017,3.64e-07,81;UBERON:0000025,4.72e-07,192;UBERON:0001301,5.26e-07,1;UBERON:0005178,5.55e-07,34;UBERON:0002224,5.55e-07,34;UBERON:0001764,9.25e-07,1;UBERON:0001825,9.25e-07,1;UBERON:0005181,9.30e-07,35 | |||
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|short_description=p1@KCNMB2-IT1 | |short_description=p1@KCNMB2-IT1 | ||
}} | }} |
Latest revision as of 20:22, 16 September 2015
Short description: | p1@KCNMB2-IT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNMB2-IT1_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 0bp_to_ENST00000441018_5end |
EntrezGene: | NA |
HGNC: | 41353 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 5.89e-07 | 1 |
peptide hormone secreting cell | 7.39e-07 | 1 |
enteroendocrine cell | 7.39e-07 | 1 |
type D enteroendocrine cell | 7.39e-07 | 1 |
somatostatin secreting cell | 7.39e-07 | 1 |
pancreatic D cell | 7.39e-07 | 1 |
progenitor cell of endocrine pancreas | 7.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.39e-07 | 1 |
paranasal sinus cancer | 9.25e-07 | 1 |
maxillary sinus cancer | 9.25e-07 | 1 |