FFCP PHASE1:Hg19::chr5:35089843..35089860,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5618 | |EntrezGene=5618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9446 | |HGNC=9446 | ||
|TSSclassifier=strong | |||
|UniProt=P16471,Q8TD76 | |UniProt=P16471,Q8TD76 | ||
|association_with_transcript=-78bp_to_uc003jjg.1,uc003jjh.1,uc003jji.1,uc003jjj.1,uc003jjk.1,uc003jjl.3_5end | |association_with_transcript=-78bp_to_uc003jjg.1,uc003jjh.1,uc003jji.1,uc003jjj.1,uc003jjk.1,uc003jjl.3_5end | ||
|cluster_id=chr5:35089843..35089860,- | |||
|coexpression_cluster_id=C160 | |coexpression_cluster_id=C160 | ||
|description=CAGE_peak_7_at_PRLR_5end | |description=CAGE_peak_7_at_PRLR_5end | ||
|id=chr5:35089843..35089860,- | |id=chr5:35089843..35089860,- | ||
|ontology_enrichment_celltype=CL:0002620!1.20e-12!23;CL:0002583!4.77e-08!2;CL:1000487!2.02e-07!2 | |ontology_enrichment_celltype=CL:0002620!1.20e-12!23;CL:0002583!4.77e-08!2;CL:1000487!2.02e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!6.85e-12!3;UBERON:0005290!6.85e-12!3;UBERON:0010096!6.85e-12!3;UBERON:0007023!2.19e-10!115;UBERON:0002199!3.47e-08!45;UBERON:0002416!3.47e-08!45;UBERON:0001049!5.18e-08!57;UBERON:0005068!5.18e-08!57;UBERON:0006241!5.18e-08!57;UBERON:0007135!5.18e-08!57;UBERON:0005743!7.09e-08!86;UBERON:0000475!1.18e-07!365;UBERON:0002616!1.21e-07!59;UBERON:0002298!2.95e-07!8;UBERON:0003075!5.13e-07!86;UBERON:0007284!5.13e-07!86;UBERON:0000955!5.24e-07!69;UBERON:0006238!5.24e-07!69;UBERON:0003102!5.49e-07!95;UBERON:0004733!6.29e-07!12;UBERON:0002028!6.29e-07!12;UBERON:0007277!6.29e-07!12;UBERON:0000073!8.91e-07!94;UBERON:0001016!8.91e-07!94 | |ontology_enrichment_uberon=UBERON:0001896!6.85e-12!3;UBERON:0005290!6.85e-12!3;UBERON:0010096!6.85e-12!3;UBERON:0007023!2.19e-10!115;UBERON:0002199!3.47e-08!45;UBERON:0002416!3.47e-08!45;UBERON:0001049!5.18e-08!57;UBERON:0005068!5.18e-08!57;UBERON:0006241!5.18e-08!57;UBERON:0007135!5.18e-08!57;UBERON:0005743!7.09e-08!86;UBERON:0000475!1.18e-07!365;UBERON:0002616!1.21e-07!59;UBERON:0002298!2.95e-07!8;UBERON:0003075!5.13e-07!86;UBERON:0007284!5.13e-07!86;UBERON:0000955!5.24e-07!69;UBERON:0006238!5.24e-07!69;UBERON:0003102!5.49e-07!95;UBERON:0004733!6.29e-07!12;UBERON:0002028!6.29e-07!12;UBERON:0007277!6.29e-07!12;UBERON:0000073!8.91e-07!94;UBERON:0001016!8.91e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.78e-67;3!UBERON:0005290;8.78e-67;3!UBERON:0002298;7.10e-34;6!UBERON:0002336;1.67e-23;1!UBERON:0011215;1.67e-23;1!UBERON:0001018;1.67e-23;1!UBERON:0002473;1.67e-23;1!UBERON:0005340;1.67e-23;1!UBERON:0003544;1.67e-23;1!UBERON:0005970;1.67e-23;1!UBERON:0002316;1.67e-23;1!UBERON:0001020;1.67e-23;1!UBERON:0002437;1.67e-23;1!UBERON:0004733;2.40e-17;12!UBERON:0002028;2.40e-17;12!UBERON:0004732;4.54e-16;13!UBERON:0005162;1.85e-12;2!UBERON:0000122;1.85e-12;2!UBERON:0002360;2.07e-12;2!UBERON:0000094;2.07e-12;2!UBERON:0010743;2.07e-12;2!UBERON:0001954;2.45e-12;2!UBERON:0003022;2.45e-12;2!UBERON:0002421;2.45e-12;2!UBERON:0002600;2.45e-12;2!UBERON:0000073;3.12e-09;53!UBERON:0002616;3.12e-09;53!UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,9.82e-67,3;UBERON:0005290,9.82e-67,3;UBERON:0010096,9.82e-67,3;UBERON:0002298,7.51e-34,6;UBERON:0002336,1.67e-23,1;UBERON:0011215,1.67e-23,1;UBERON:0001018,1.67e-23,1;UBERON:0002473,1.67e-23,1;UBERON:0005340,1.67e-23,1;UBERON:0003544,1.67e-23,1;UBERON:0005970,1.67e-23,1;UBERON:0002316,1.67e-23,1;UBERON:0001020,1.67e-23,1;UBERON:0002437,1.67e-23,1;UBERON:0004733,2.46e-17,12;UBERON:0002028,2.46e-17,12;UBERON:0007277,2.46e-17,12;UBERON:0004732,4.65e-16,13;UBERON:0003076,5.16e-14,15;UBERON:0003057,5.16e-14,15;UBERON:0005162,1.85e-12,2;UBERON:0000122,1.85e-12,2;UBERON:0002360,2.07e-12,2;UBERON:0000094,2.07e-12,2;UBERON:0010743,2.07e-12,2;UBERON:0001954,2.32e-12,2;UBERON:0003022,2.32e-12,2;UBERON:0002421,2.32e-12,2;UBERON:0002600,2.32e-12,2;UBERON:0000073,1.85e-10,53;UBERON:0002616,1.85e-10,53;UBERON:0001049,6.44e-10,56;UBERON:0005068,6.44e-10,56;UBERON:0006241,6.44e-10,56;UBERON:0007135,6.44e-10,56;UBERON:0001017,1.26e-09,81;UBERON:0001016,1.12e-08,89;UBERON:0000920,1.30e-08,3;UBERON:0000955,4.25e-08,68;UBERON:0006238,4.25e-08,68;UBERON:0007023,5.52e-07,114;UBERON:0003075,7.67e-07,82;UBERON:0007284,7.67e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.85422955527427,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0,0,1.38074847963449,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,3.94893714877151,0,0,0.307801034015188,0,0,0,0,0.957003479195758,1.92354946143911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92028270758942,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58786471611994,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8172781758837,19.9672292766334,2.2354705058898,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.85422955527427,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0,0,1.38074847963449,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.34444334449382,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,3.94893714877151,0,0,0.307801034015188,0,0,0,0,0.957003479195758,1.92354946143911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92028270758942,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58786471611994,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8172781758837,19.9672292766334,2.2354705058898,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@PRLR | |short_description=p7@PRLR | ||
}} | }} |
Latest revision as of 18:09, 17 September 2015
Short description: | p7@PRLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRLR_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -78bp_to_uc003jjg.1, uc003jjh.1, uc003jji.1, uc003jjj.1, uc003jjk.1, uc003jjl.3_5end |
EntrezGene: | PRLR |
HGNC: | 9446 |
UniProt: | P16471Q8TD76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.30e-08 | 3 |