FFCP PHASE1:Hg19::chr6:138192543..138192555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=D3TTY4,D3TTY5,D3TTY6,D3TTY7,D3TTY8,D3TTY9,D3TTZ0,D3TTZ1,D3TTZ2,D3TTZ3,D3TTZ4,D3TTZ5,D3TTZ6,D3TTZ7,D3TTZ8 | |UniProt=D3TTY4,D3TTY5,D3TTY6,D3TTY7,D3TTY8,D3TTY9,D3TTZ0,D3TTZ1,D3TTZ2,D3TTZ3,D3TTZ4,D3TTZ5,D3TTZ6,D3TTZ7,D3TTZ8 | ||
|association_with_transcript=178bp_to_AB587366,CU687932,FJ434402,FJ434405,FJ434406,FJ434407,FJ434408,FJ434409,FJ434410,FJ434411,FJ434412,FJ434413,FJ434414,FJ434415,FJ434417,FJ434418,FJ434419_5end | |association_with_transcript=178bp_to_AB587366,CU687932,FJ434402,FJ434405,FJ434406,FJ434407,FJ434408,FJ434409,FJ434410,FJ434411,FJ434412,FJ434413,FJ434414,FJ434415,FJ434417,FJ434418,FJ434419_5end | ||
|cluster_id=chr6:138192543..138192555,+ | |||
|coexpression_cluster_id=C426 | |coexpression_cluster_id=C426 | ||
|description=CAGE_peak_13_at_TNFAIP3_5end | |description=CAGE_peak_13_at_TNFAIP3_5end | ||
|id=chr6:138192543..138192555,+ | |id=chr6:138192543..138192555,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.36e-39!140;CL:0002087!1.50e-29!119;CL:0002031!7.09e-29!124;CL:0000037!3.53e-27!172;CL:0000566!3.53e-27!172;CL:0002057!3.77e-27!42;CL:0000766!2.27e-26!76;CL:0000988!2.57e-26!182;CL:0002032!1.29e-25!165;CL:0000837!1.29e-25!165;CL:0000860!2.56e-24!45;CL:0000557!4.27e-21!71;CL:0002009!2.10e-20!65;CL:0000839!5.32e-19!70;CL:0002194!8.28e-19!63;CL:0000576!8.28e-19!63;CL:0000040!8.28e-19!63;CL:0000559!8.28e-19!63;CL:0000763!3.89e-16!112;CL:0000049!3.89e-16!112;CL:0000034!3.42e-12!444;CL:0000048!8.57e-12!430;CL:0000723!8.58e-12!436;CL:0000134!5.29e-10!358;CL:0002320!3.40e-09!365;CL:0000542!3.87e-09!53;CL:0000051!3.87e-09!53;CL:0000094!6.53e-09!8;CL:0000838!8.59e-09!52;CL:0000081!1.77e-07!11;CL:0000219!2.45e-07!390;CL:0000624!4.73e-07!6 | |ontology_enrichment_celltype=CL:0000738!2.36e-39!140;CL:0002087!1.50e-29!119;CL:0002031!7.09e-29!124;CL:0000037!3.53e-27!172;CL:0000566!3.53e-27!172;CL:0002057!3.77e-27!42;CL:0000766!2.27e-26!76;CL:0000988!2.57e-26!182;CL:0002032!1.29e-25!165;CL:0000837!1.29e-25!165;CL:0000860!2.56e-24!45;CL:0000557!4.27e-21!71;CL:0002009!2.10e-20!65;CL:0000839!5.32e-19!70;CL:0002194!8.28e-19!63;CL:0000576!8.28e-19!63;CL:0000040!8.28e-19!63;CL:0000559!8.28e-19!63;CL:0000763!3.89e-16!112;CL:0000049!3.89e-16!112;CL:0000034!3.42e-12!444;CL:0000048!8.57e-12!430;CL:0000723!8.58e-12!436;CL:0000134!5.29e-10!358;CL:0002320!3.40e-09!365;CL:0000542!3.87e-09!53;CL:0000051!3.87e-09!53;CL:0000094!6.53e-09!8;CL:0000838!8.59e-09!52;CL:0000081!1.77e-07!11;CL:0000219!2.45e-07!390;CL:0000624!4.73e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.36e-34;33!CL:0002057;2.36e-34;33!CL:0000473;3.48e-23;39!CL:0000234;3.48e-23;39!CL:0000576;8.93e-20;48!CL:0000766;3.97e-19;69!CL:0000094;3.94e-18;8!CL:0000081;1.34e-16;11!CL:0002087;2.09e-13;104!CL:0000623;4.69e-10;3!CL:0000791;6.05e-10;18!CL:0000789;6.05e-10;18!CL:0002419;6.05e-10;18!CL:0000775;7.66e-10;3!CL:0000738;1.09e-09;136!CL:0000763;2.70e-09;100!CL:0000624;1.55e-08;6!CL:0000771;8.67e-08;2!CL:0001014;4.64e-07;2!CL:0001016;4.64e-07;2!CL:0000084;9.02e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.80e-48,136;CL:0000766,2.60e-41,72;CL:0000860,1.44e-37,42;CL:0002057,1.44e-37,42;CL:0000037,1.17e-36,168;CL:0000988,8.03e-36,177;CL:0002031,1.62e-35,120;CL:0002032,4.63e-35,161;CL:0000837,4.63e-35,161;CL:0000473,4.97e-32,48;CL:0000234,4.97e-32,48;CL:0002087,1.33e-31,115;CL:0000557,1.39e-31,67;CL:0000763,3.11e-28,108;CL:0000049,3.11e-28,108;CL:0002009,7.30e-28,61;CL:0000839,2.12e-27,66;CL:0002194,2.71e-24,59;CL:0000576,2.71e-24,59;CL:0000040,2.71e-24,59;CL:0000559,2.71e-24,59;CL:0000094,2.60e-18,8;CL:0000081,8.60e-17,11;CL:0000134,4.67e-14,354;CL:0002320,1.55e-13,361;CL:0000034,6.71e-13,441;CL:0000048,2.93e-12,427;CL:0000723,6.65e-12,433;CL:0000219,1.04e-11,386;CL:0000623,4.16e-10,3;CL:0000825,4.16e-10,3;CL:0000775,4.56e-10,3;CL:0000791,4.92e-10,18;CL:0000789,4.92e-10,18;CL:0002420,4.92e-10,18;CL:0002419,4.92e-10,18;CL:0000790,4.92e-10,18;CL:0000624,1.03e-08,6;CL:0000771,8.41e-08,2;CL:0001014,3.01e-07,2;CL:0001016,3.01e-07,2;CL:0000838,3.56e-07,52;CL:0000542,5.48e-07,53;CL:0000051,5.48e-07,53;CL:0000084,7.84e-07,25;CL:0000827,7.84e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-28;42!CL:0000790;6.05e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.76e-17!80;UBERON:0002390!1.28e-16!102;UBERON:0003061!1.28e-16!102;UBERON:0002193!7.40e-15!112;UBERON:0001474!1.83e-14!86;UBERON:0002405!6.27e-12!115;UBERON:0004765!1.03e-11!101;UBERON:0001434!1.03e-11!101;UBERON:0002204!1.08e-10!167;UBERON:0003081!4.98e-10!216;UBERON:0002384!7.54e-09!375 | |ontology_enrichment_uberon=UBERON:0002371!8.76e-17!80;UBERON:0002390!1.28e-16!102;UBERON:0003061!1.28e-16!102;UBERON:0002193!7.40e-15!112;UBERON:0001474!1.83e-14!86;UBERON:0002405!6.27e-12!115;UBERON:0004765!1.03e-11!101;UBERON:0001434!1.03e-11!101;UBERON:0002204!1.08e-10!167;UBERON:0003081!4.98e-10!216;UBERON:0002384!7.54e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.84e-27,76;UBERON:0002390,4.40e-26,98;UBERON:0003061,4.40e-26,98;UBERON:0001474,1.93e-24,82;UBERON:0002193,7.03e-23,108;UBERON:0002405,2.47e-22,93;UBERON:0004765,1.33e-21,90;UBERON:0001434,1.07e-18,100;UBERON:0003081,3.03e-13,203;UBERON:0002384,7.92e-13,371;UBERON:0002204,1.02e-11,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0,0,0,0,0,0,0.125542639594803,0.382067028739756,0.492603536699674,0.629686250509434,0.393364276848904,1.53531759238885,1.08371286321253,0,0,0,0,0.142169232487422,0,4.43196326825502,5.61524452916397,5.20826089718044,0,0.647787332037959,0,0.145398238779565,0,0.485168122375632,1.39457422143411,2.05583944010913,1.23882548358041,3.45230870786581,3.07392847834921,1.89185783910868,6.20542225325913,6.45484683583826,8.12558919566051,1.12945403725563,1.36453075028923,0.674170453335254,10.4068523406107,3.20929027076094,7.67204550958849,0,0.997318288108159,0.426224750532694,9.86711411337186,5.6738522469114,6.85104473895132,0.75374599577023,2.60741459210101,0.868755378820466,10.8971910474006,7.36555271975129,3.79754864929061,0,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.48217676009124,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,1.52909291250092,1.32171328579026,1.12101712596307,0,1.7703879310245,9.03924754323079,6.7848494669838,0,0.651844533267181,0.473447805734733,0,0,0.883817722424512,0.443067789167242,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0,1.03800594213442,0.535081656179426,0,0,1.53288197440768,2.06176467289578,1.01207876807801,0,0,0,0,0,1.24930726552346,0,0,4.63695509416885,10.6976078313403,4.19990771260117,0,0,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.398873881556595,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0.25326102332916,0.529636723252875,0,0,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,2.69526550203004,2.30591925467138,1.64115163454294,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,2.56139988262505,4.74380664690938,2.56686072559497,0,0,0,0,0,1.49801404789436,14.9580729602012,1.65766205374414,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,5.60856922128404,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0.842516912477962,0,0.487426979262569,2.11300293513511,0,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.95497793895076,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,3.19001159731919,0,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,1.48260564340311,0.370691816839509,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0.640358984218058,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,1.43574604915363,0,0.429226048136571,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,1.799791132412,4.6428117273477,0,0,0.0788057072991982,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0.310874401165561,0.295710299979268,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.214821114084977,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.490696182767533,0.655219697692825,0.491545817507439,0,0.79994958341972,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.163771917510097,0.29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| ||
|short_description=p13@TNFAIP3 | |short_description=p13@TNFAIP3 | ||
}} | }} |
Latest revision as of 03:30, 25 September 2015
Short description: | p13@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNFAIP3_5end |
Coexpression cluster: | C426_CD4_CD14_Neutrophils_CD8_Natural_Mast_Eosinophils |
Association with transcript: | 178bp_to_AB587366, CU687932, FJ434402, FJ434405, FJ434406, FJ434407, FJ434408, FJ434409, FJ434410, FJ434411, FJ434412, FJ434413, FJ434414, FJ434415, FJ434417, FJ434418, FJ434419_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | D3TTY4D3TTY5D3TTY6D3TTY7D3TTY8D3TTY9D3TTZ0D3TTZ1D3TTZ2D3TTZ3D3TTZ4D3TTZ5D3TTZ6D3TTZ7D3TTZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.84e-27 | 76 |
hematopoietic system | 4.40e-26 | 98 |
blood island | 4.40e-26 | 98 |
bone element | 1.93e-24 | 82 |
hemolymphoid system | 7.03e-23 | 108 |
immune system | 2.47e-22 | 93 |
skeletal element | 1.33e-21 | 90 |
skeletal system | 1.07e-18 | 100 |
lateral plate mesoderm | 3.03e-13 | 203 |
connective tissue | 7.92e-13 | 371 |
musculoskeletal system | 1.02e-11 | 167 |