FFCP PHASE1:Hg19::chr7:98445661..98445681,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222865 | |EntrezGene=222865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25429 | |HGNC=25429 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-310bp_to_ENST00000474857_5end | |association_with_transcript=-310bp_to_ENST00000474857_5end | ||
|cluster_id=chr7:98445661..98445681,- | |||
|coexpression_cluster_id=C149 | |coexpression_cluster_id=C149 | ||
|description=CAGE_peak_11_at_TMEM130_5end | |description=CAGE_peak_11_at_TMEM130_5end | ||
|id=chr7:98445661..98445681,- | |id=chr7:98445661..98445681,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.45e-12;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.17e-08;3!UBERON:0003057;1.17e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-60!57;UBERON:0005068!1.09e-60!57;UBERON:0006241!1.09e-60!57;UBERON:0007135!1.09e-60!57;UBERON:0001017!4.39e-54!82;UBERON:0005743!4.58e-54!86;UBERON:0002780!5.53e-53!41;UBERON:0001890!5.53e-53!41;UBERON:0006240!5.53e-53!41;UBERON:0003080!1.37e-51!42;UBERON:0007023!5.26e-51!115;UBERON:0002616!6.60e-51!59;UBERON:0000955!2.93e-48!69;UBERON:0006238!2.93e-48!69;UBERON:0002619!3.43e-48!22;UBERON:0000073!3.68e-48!94;UBERON:0001016!3.68e-48!94;UBERON:0001893!8.23e-46!34;UBERON:0003075!2.07e-45!86;UBERON:0007284!2.07e-45!86;UBERON:0001869!1.37e-44!32;UBERON:0002346!5.12e-43!90;UBERON:0002791!8.67e-43!33;UBERON:0000956!4.41e-42!25;UBERON:0000203!4.41e-42!25;UBERON:0001950!1.50e-41!20;UBERON:0002020!1.57e-37!34;UBERON:0003528!1.57e-37!34;UBERON:0003056!2.19e-36!61;UBERON:0000153!2.43e-27!129;UBERON:0007811!2.43e-27!129;UBERON:0000033!2.59e-27!123;UBERON:0004121!5.27e-23!169;UBERON:0000924!2.88e-22!173;UBERON:0006601!2.88e-22!173;UBERON:0000349!1.31e-18!5;UBERON:0000200!1.46e-15!6;UBERON:0000025!2.53e-14!194;UBERON:0002021!2.95e-12!5;UBERON:0001872!6.40e-12!5;UBERON:0004111!1.27e-11!241;UBERON:0001871!1.38e-11!7;UBERON:0003076!1.20e-10!15;UBERON:0003057!1.20e-10!15;UBERON:0000477!5.88e-10!286;UBERON:0000483!6.18e-10!309;UBERON:0000119!9.45e-10!312;UBERON:0001954!1.11e-08!2;UBERON:0003022!1.11e-08!2;UBERON:0002421!1.11e-08!2;UBERON:0002600!1.11e-08!2;UBERON:0001870!1.34e-08!2;UBERON:0001876!1.39e-08!2;UBERON:0001894!1.76e-08!7;UBERON:0006222!1.76e-08!7;UBERON:0000064!3.42e-08!219;UBERON:0000062!6.83e-08!511;UBERON:0002360!9.09e-08!2;UBERON:0000094!9.09e-08!2;UBERON:0007645!9.09e-08!2;UBERON:0000475!4.37e-07!365;UBERON:0004733!4.93e-07!12;UBERON:0002028!4.93e-07!12;UBERON:0007277!4.93e-07!12;UBERON:0002420!8.83e-07!9;UBERON:0007245!8.83e-07!9;UBERON:0010009!8.83e-07!9;UBERON:0010011!8.83e-07!9;UBERON:0000454!8.83e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.09e-60!57;UBERON:0005068!1.09e-60!57;UBERON:0006241!1.09e-60!57;UBERON:0007135!1.09e-60!57;UBERON:0001017!4.39e-54!82;UBERON:0005743!4.58e-54!86;UBERON:0002780!5.53e-53!41;UBERON:0001890!5.53e-53!41;UBERON:0006240!5.53e-53!41;UBERON:0003080!1.37e-51!42;UBERON:0007023!5.26e-51!115;UBERON:0002616!6.60e-51!59;UBERON:0000955!2.93e-48!69;UBERON:0006238!2.93e-48!69;UBERON:0002619!3.43e-48!22;UBERON:0000073!3.68e-48!94;UBERON:0001016!3.68e-48!94;UBERON:0001893!8.23e-46!34;UBERON:0003075!2.07e-45!86;UBERON:0007284!2.07e-45!86;UBERON:0001869!1.37e-44!32;UBERON:0002346!5.12e-43!90;UBERON:0002791!8.67e-43!33;UBERON:0000956!4.41e-42!25;UBERON:0000203!4.41e-42!25;UBERON:0001950!1.50e-41!20;UBERON:0002020!1.57e-37!34;UBERON:0003528!1.57e-37!34;UBERON:0003056!2.19e-36!61;UBERON:0000153!2.43e-27!129;UBERON:0007811!2.43e-27!129;UBERON:0000033!2.59e-27!123;UBERON:0004121!5.27e-23!169;UBERON:0000924!2.88e-22!173;UBERON:0006601!2.88e-22!173;UBERON:0000349!1.31e-18!5;UBERON:0000200!1.46e-15!6;UBERON:0000025!2.53e-14!194;UBERON:0002021!2.95e-12!5;UBERON:0001872!6.40e-12!5;UBERON:0004111!1.27e-11!241;UBERON:0001871!1.38e-11!7;UBERON:0003076!1.20e-10!15;UBERON:0003057!1.20e-10!15;UBERON:0000477!5.88e-10!286;UBERON:0000483!6.18e-10!309;UBERON:0000119!9.45e-10!312;UBERON:0001954!1.11e-08!2;UBERON:0003022!1.11e-08!2;UBERON:0002421!1.11e-08!2;UBERON:0002600!1.11e-08!2;UBERON:0001870!1.34e-08!2;UBERON:0001876!1.39e-08!2;UBERON:0001894!1.76e-08!7;UBERON:0006222!1.76e-08!7;UBERON:0000064!3.42e-08!219;UBERON:0000062!6.83e-08!511;UBERON:0002360!9.09e-08!2;UBERON:0000094!9.09e-08!2;UBERON:0007645!9.09e-08!2;UBERON:0000475!4.37e-07!365;UBERON:0004733!4.93e-07!12;UBERON:0002028!4.93e-07!12;UBERON:0007277!4.93e-07!12;UBERON:0002420!8.83e-07!9;UBERON:0007245!8.83e-07!9;UBERON:0010009!8.83e-07!9;UBERON:0010011!8.83e-07!9;UBERON:0000454!8.83e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001871;7.86e-29;6!UBERON:0001874;2.93e-23;1!UBERON:0001950;3.12e-17;20!UBERON:0002791;8.46e-17;32!UBERON:0001893;3.76e-16;34!UBERON:0002619;8.94e-16;22!UBERON:0001869;1.59e-15;32!UBERON:0003528;2.61e-14;34!UBERON:0002020;2.61e-14;34!UBERON:0000956;5.23e-14;25!UBERON:0000203;5.23e-14;25!UBERON:0002771;2.45e-12;2!UBERON:0001876;2.45e-12;2!UBERON:0002420;9.23e-11;9!UBERON:0007245;9.23e-11;9!UBERON:0010009;9.23e-11;9!UBERON:0010011;9.23e-11;9!UBERON:0000454;9.23e-11;9!UBERON:0001017;6.05e-10;75!UBERON:0002240;1.17e-08;3!UBERON:0005174;1.17e-08;3!UBERON:0005383;1.17e-08;3!UBERON:0001137;1.17e-08;3!UBERON:0005382;1.17e-08;3!UBERON:0001016;2.53e-08;83!UBERON:0002780;4.36e-07;41!UBERON:0001890;4.36e-07;41!UBERON:0000955;6.09e-07;68!UBERON:0000369;8.37e-07;4!UBERON:0002435;8.37e-07;4!UBERON:0000204;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,9.99e-29,6;UBERON:0001874,4.10e-23,1;UBERON:0001950,3.47e-17,20;UBERON:0002791,7.67e-17,32;UBERON:0001869,7.67e-17,32;UBERON:0001017,8.89e-17,81;UBERON:0003528,6.80e-16,34;UBERON:0002020,6.80e-16,34;UBERON:0001893,6.80e-16,34;UBERON:0002619,9.85e-16,22;UBERON:0001016,4.02e-15,89;UBERON:0000956,5.70e-14,25;UBERON:0000203,5.70e-14,25;UBERON:0001049,6.71e-14,56;UBERON:0005068,6.71e-14,56;UBERON:0006241,6.71e-14,56;UBERON:0007135,6.71e-14,56;UBERON:0002780,2.77e-13,41;UBERON:0001890,2.77e-13,41;UBERON:0003080,2.77e-13,41;UBERON:0006240,2.77e-13,41;UBERON:0001876,1.65e-12,2;UBERON:0002771,3.24e-12,2;UBERON:0000955,2.40e-11,68;UBERON:0006238,2.40e-11,68;UBERON:0002420,8.37e-11,9;UBERON:0007245,8.37e-11,9;UBERON:0010009,8.37e-11,9;UBERON:0010011,8.37e-11,9;UBERON:0000454,8.37e-11,9;UBERON:0000073,2.26e-10,53;UBERON:0002616,2.26e-10,53;UBERON:0003075,1.52e-09,82;UBERON:0007284,1.52e-09,82;UBERON:0007023,2.38e-09,114;UBERON:0002346,4.20e-09,86;UBERON:0003056,4.72e-09,61;UBERON:0002240,1.21e-08,3;UBERON:0005174,1.21e-08,3;UBERON:0001137,1.21e-08,3;UBERON:0005383,1.30e-08,3;UBERON:0005382,1.30e-08,3;UBERON:0004121,7.12e-08,171;UBERON:0000924,7.12e-08,171;UBERON:0006601,7.12e-08,171;UBERON:0010371,1.58e-07,104;UBERON:0000369,9.11e-07,4;UBERON:0002435,9.11e-07,4;UBERON:0000204,9.11e-07,4;UBERON:0010082,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.66982576691332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,9.23023639083397,0.504143392443436,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0.781078098613847,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.339848664884159,0.526182188502793,0,0,0.078493092850514,1.25692471932802,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.66982576691332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.09823638411767,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,9.23023639083397,0.504143392443436,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945526184657525,0.781078098613847,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.339848664884159,0.526182188502793,0,0,0.078493092850514,1.25692471932802,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,1.51557396436479,0.267964130156178,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@TMEM130 | |short_description=p11@TMEM130 | ||
}} | }} |
Latest revision as of 07:20, 20 September 2015
Short description: | p11@TMEM130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TMEM130_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | -310bp_to_ENST00000474857_5end |
EntrezGene: | TMEM130 |
HGNC: | 25429 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data