FFCP PHASE1:Hg19::chr9:130540914..130540932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |EntrezGene=10044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |HGNC=16884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000473535,uc004bsd.1_5end | |association_with_transcript=41bp_to_ENST00000473535,uc004bsd.1_5end | ||
|cluster_id=chr9:130540914..130540932,- | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_5_at_SH2D3C_5end | |description=CAGE_peak_5_at_SH2D3C_5end | ||
|id=chr9:130540914..130540932,- | |id=chr9:130540914..130540932,- | ||
|ontology_enrichment_celltype=CL:0002057!3.14e-49!42;CL:0000037!1.73e-46!172;CL:0000566!1.73e-46!172;CL:0000738!2.06e-45!140;CL:0000860!5.91e-45!45;CL:0000988!2.19e-42!182;CL:0002087!1.27e-41!119;CL:0002032!1.08e-40!165;CL:0000837!1.08e-40!165;CL:0000766!1.06e-39!76;CL:0002194!1.08e-35!63;CL:0000576!1.08e-35!63;CL:0000040!1.08e-35!63;CL:0000559!1.08e-35!63;CL:0000763!3.32e-34!112;CL:0000049!3.32e-34!112;CL:0002031!3.39e-34!124;CL:0002009!3.93e-34!65;CL:0000557!2.78e-33!71;CL:0000839!3.65e-32!70;CL:0002393!1.15e-14!9;CL:0002397!1.15e-14!9;CL:0000134!1.95e-09!358;CL:0002320!7.84e-09!365;CL:0000094!1.98e-07!8;CL:0000542!7.10e-07!53;CL:0000051!7.10e-07!53;CL:0000219!9.04e-07!390 | |ontology_enrichment_celltype=CL:0002057!3.14e-49!42;CL:0000037!1.73e-46!172;CL:0000566!1.73e-46!172;CL:0000738!2.06e-45!140;CL:0000860!5.91e-45!45;CL:0000988!2.19e-42!182;CL:0002087!1.27e-41!119;CL:0002032!1.08e-40!165;CL:0000837!1.08e-40!165;CL:0000766!1.06e-39!76;CL:0002194!1.08e-35!63;CL:0000576!1.08e-35!63;CL:0000040!1.08e-35!63;CL:0000559!1.08e-35!63;CL:0000763!3.32e-34!112;CL:0000049!3.32e-34!112;CL:0002031!3.39e-34!124;CL:0002009!3.93e-34!65;CL:0000557!2.78e-33!71;CL:0000839!3.65e-32!70;CL:0002393!1.15e-14!9;CL:0002397!1.15e-14!9;CL:0000134!1.95e-09!358;CL:0002320!7.84e-09!365;CL:0000094!1.98e-07!8;CL:0000542!7.10e-07!53;CL:0000051!7.10e-07!53;CL:0000219!9.04e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.16e-48;33!CL:0002057;3.16e-48;33!CL:0000576;7.95e-44;48!CL:0000473;7.66e-34;39!CL:0000234;7.66e-34;39!CL:0000766;9.91e-33;69!CL:0002393;1.73e-23;6!CL:0002397;1.73e-23;6!CL:0000094;6.07e-18;8!CL:0000763;3.19e-17;100!CL:0000875;9.39e-14;3!CL:0002396;9.39e-14;3!CL:0000081;7.28e-13;11!CL:0000767;1.25e-12;3!CL:0000226;1.75e-12;3!CL:0000842;1.75e-12;3!CL:0002087;2.48e-12;104!CL:0000738;3.77e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.84e-83,42;CL:0002057,7.84e-83,42;CL:0000473,1.61e-71,48;CL:0000234,1.61e-71,48;CL:0000766,8.00e-70,72;CL:0002194,1.61e-59,59;CL:0000576,1.61e-59,59;CL:0000040,1.61e-59,59;CL:0000559,1.61e-59,59;CL:0002009,2.40e-57,61;CL:0000557,4.92e-55,67;CL:0000763,1.06e-54,108;CL:0000049,1.06e-54,108;CL:0000839,1.76e-52,66;CL:0000738,8.08e-42,136;CL:0000037,7.82e-40,168;CL:0000988,2.52e-37,177;CL:0002393,1.78e-35,9;CL:0002397,1.78e-35,9;CL:0002032,9.69e-34,161;CL:0000837,9.69e-34,161;CL:0002087,2.38e-33,115;CL:0002031,1.42e-25,120;CL:0000094,5.25e-18,8;CL:0000134,8.57e-14,354;CL:0000875,9.41e-14,3;CL:0002396,9.41e-14,3;CL:0002320,2.47e-13,361;CL:0000081,6.57e-13,11;CL:0000767,1.12e-12,3;CL:0000226,1.42e-12,3;CL:0000842,1.42e-12,3;CL:0000219,1.02e-11,386;CL:0000048,9.65e-10,427;CL:0000723,1.81e-09,433;CL:0000034,4.07e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-59;42!CL:0000049;1.17e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.93e-44!102;UBERON:0003061!4.93e-44!102;UBERON:0002193!3.42e-38!112;UBERON:0002371!8.96e-31!80;UBERON:0001474!1.65e-27!86;UBERON:0002405!1.76e-21!115;UBERON:0004765!4.18e-21!101;UBERON:0001434!4.18e-21!101;UBERON:0003081!5.48e-14!216;UBERON:0000178!5.86e-11!15;UBERON:0000179!5.86e-11!15;UBERON:0000463!5.86e-11!15;UBERON:0002384!5.08e-08!375;UBERON:0002204!2.27e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!4.93e-44!102;UBERON:0003061!4.93e-44!102;UBERON:0002193!3.42e-38!112;UBERON:0002371!8.96e-31!80;UBERON:0001474!1.65e-27!86;UBERON:0002405!1.76e-21!115;UBERON:0004765!4.18e-21!101;UBERON:0001434!4.18e-21!101;UBERON:0003081!5.48e-14!216;UBERON:0000178!5.86e-11!15;UBERON:0000179!5.86e-11!15;UBERON:0000463!5.86e-11!15;UBERON:0002384!5.08e-08!375;UBERON:0002204!2.27e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.23e-15;15!UBERON:0000179;1.23e-15;15!UBERON:0000463;1.23e-15;15!UBERON:0002390;2.07e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.89e-58,98;UBERON:0003061,8.89e-58,98;UBERON:0002193,1.25e-51,108;UBERON:0002371,1.16e-47,76;UBERON:0001474,1.22e-43,82;UBERON:0004765,4.26e-39,90;UBERON:0002405,1.36e-37,93;UBERON:0001434,1.96e-34,100;UBERON:0003081,2.82e-23,203;UBERON:0002204,1.52e-17,167;UBERON:0000178,1.26e-15,15;UBERON:0000179,1.26e-15,15;UBERON:0000463,1.26e-15,15;UBERON:0002384,1.04e-12,371;UBERON:0000926,9.31e-12,315;UBERON:0004120,9.31e-12,315;UBERON:0006603,9.31e-12,315 | |||
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|short_description=p5@SH2D3C | |short_description=p5@SH2D3C | ||
}} | }} |
Latest revision as of 05:13, 25 September 2015
Short description: | p5@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SH2D3C_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 41bp_to_ENST00000473535, uc004bsd.1_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.89e-58 | 98 |
blood island | 8.89e-58 | 98 |
hemolymphoid system | 1.25e-51 | 108 |
bone marrow | 1.16e-47 | 76 |
bone element | 1.22e-43 | 82 |
skeletal element | 4.26e-39 | 90 |
immune system | 1.36e-37 | 93 |
skeletal system | 1.96e-34 | 100 |
lateral plate mesoderm | 2.82e-23 | 203 |
musculoskeletal system | 1.52e-17 | 167 |
blood | 1.26e-15 | 15 |
haemolymphatic fluid | 1.26e-15 | 15 |
organism substance | 1.26e-15 | 15 |
connective tissue | 1.04e-12 | 371 |
mesoderm | 9.31e-12 | 315 |
mesoderm-derived structure | 9.31e-12 | 315 |
presumptive mesoderm | 9.31e-12 | 315 |