FFCP PHASE1:Hg19::chr19:55684198..55684213,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:55684198..55684213,+
|short_description=p@chr19:55684198..55684213,+
|description=CAGE_peak_at_chr19:55684198..55684213,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:55684198..55684213,+ | |||
|description=CAGE_peak_at_chr19:55684198..55684213,+ | |||
|id=chr19:55684198..55684213,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.24e-40!180;CL:0000680!6.08e-24!57;CL:0000056!6.08e-24!57;CL:0000355!6.08e-24!57;CL:0000187!1.34e-22!54;CL:0000057!4.48e-22!75;CL:0000359!7.62e-22!32;CL:0000192!3.90e-21!42;CL:0000514!3.90e-21!42;CL:0000144!6.62e-21!625;CL:0000183!7.32e-20!59;CL:0002371!1.42e-19!591;CL:0000548!3.16e-19!679;CL:0000004!3.16e-19!679;CL:0000255!3.16e-19!679;CL:0000393!3.22e-19!60;CL:0000211!3.22e-19!60;CL:0000012!9.22e-19!682;CL:0000220!2.87e-17!246;CL:0002321!8.11e-17!248;CL:0000003!2.29e-13!722;CL:0000222!5.23e-13!119;CL:0002620!1.61e-12!23;CL:0000723!2.68e-10!436;CL:0002539!7.97e-10!10;CL:0000048!9.48e-10!430;CL:0000034!2.66e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.78e-23;32!CL:0000192;7.78e-15;43!CL:0002539;5.54e-13;10!CL:0002620;7.12e-12;23!CL:0000187;4.37e-09;55!CL:0002595;2.79e-07;5!CL:0000393;4.73e-07;61!CL:0000211;4.73e-07;61!CL:0002570;5.67e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.58e-24,32;CL:0000192,1.03e-19,43;CL:0000514,1.03e-19,43;CL:0000680,3.76e-18,58;CL:0000056,3.76e-18,58;CL:0000355,3.76e-18,58;CL:0000187,2.44e-17,55;CL:0000393,1.64e-14,61;CL:0000211,1.64e-14,61;CL:0000057,4.68e-14,76;CL:0002539,6.11e-13,10;CL:0002620,9.28e-12,23;CL:0002321,1.88e-10,250;CL:0000723,1.72e-09,433;CL:0000034,8.88e-09,441;CL:0000048,1.00e-08,427;CL:0000222,1.96e-08,121;CL:0002595,3.39e-07,5;CL:0002570,4.16e-07,8;CL:0002551,7.73e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;7.78e-15;43!CL:0000355;5.84e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!4.44e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.91e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.69e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.34e-28!82;UBERON:0000914!1.50e-27!83;UBERON:0002329!1.50e-27!83;UBERON:0003077!1.50e-27!83;UBERON:0003059!1.50e-27!83;UBERON:0007282!1.50e-27!83;UBERON:0009618!1.50e-27!83;UBERON:0007285!1.50e-27!83;UBERON:0004290!7.04e-25!70;UBERON:0001134!4.59e-21!61;UBERON:0002036!4.59e-21!61;UBERON:0003082!4.59e-21!61;UBERON:0002385!1.44e-20!63;UBERON:0001015!1.44e-20!63;UBERON:0000383!1.44e-20!63;UBERON:0001637!3.12e-18!42;UBERON:0003509!3.12e-18!42;UBERON:0004572!3.12e-18!42;UBERON:0003102!1.91e-17!95;UBERON:0004573!6.12e-15!33;UBERON:0004571!6.12e-15!33;UBERON:0005256!1.03e-14!143;UBERON:0001981!2.53e-13!60;UBERON:0007500!2.53e-13!60;UBERON:0004537!2.53e-13!60;UBERON:0006965!2.53e-13!60;UBERON:0002199!6.85e-13!45;UBERON:0002416!6.85e-13!45;UBERON:0000055!1.11e-11!69;UBERON:0004872!1.20e-11!84;UBERON:0002097!1.42e-11!40;UBERON:0002049!9.98e-11!79;UBERON:0007798!9.98e-11!79;UBERON:0000475!3.57e-10!365;UBERON:0002100!6.16e-10!216;UBERON:0004237!7.97e-10!10;UBERON:0004695!7.97e-10!10;UBERON:0002111!7.97e-10!10;UBERON:0004178!7.97e-10!10;UBERON:0000490!3.78e-09!138;UBERON:0001135!6.60e-09!15;UBERON:0004535!5.95e-08!110;UBERON:0001009!2.51e-07!113;UBERON:0003914!3.34e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.13e-19;33!UBERON:0004571;5.13e-19;33!UBERON:0001637;7.24e-16;42!UBERON:0003509;7.24e-16;42!UBERON:0004572;7.24e-16;42!UBERON:0004237;5.54e-13;10!UBERON:0004695;5.54e-13;10!UBERON:0002111;5.54e-13;10!UBERON:0004178;5.54e-13;10!UBERON:0000947;1.37e-09;21!UBERON:0010191;1.37e-09;21!UBERON:0002097;1.11e-08;41!UBERON:0007500;1.53e-08;56!UBERON:0001981;1.53e-08;56!UBERON:0004537;1.53e-08;56!UBERON:0002199;3.59e-08;46!UBERON:0002416;3.59e-08;46!UBERON:0003102;7.14e-08;50!UBERON:0001135;1.24e-07;15!UBERON:0003834;2.79e-07;5!UBERON:0001533;2.79e-07;5!UBERON:0000992;8.28e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.64e-24,83;UBERON:0001637,3.96e-24,42;UBERON:0003509,3.96e-24,42;UBERON:0004572,3.96e-24,42;UBERON:0004573,1.66e-21,33;UBERON:0004571,1.66e-21,33;UBERON:0002329,4.05e-20,71;UBERON:0003059,4.05e-20,71;UBERON:0007282,4.05e-20,71;UBERON:0004290,4.05e-20,71;UBERON:0009618,4.05e-20,71;UBERON:0003077,1.23e-19,72;UBERON:0007285,1.23e-19,72;UBERON:0007524,3.59e-19,73;UBERON:0007503,4.98e-17,78;UBERON:0001134,3.39e-16,62;UBERON:0002036,3.39e-16,62;UBERON:0003082,3.39e-16,62;UBERON:0002385,2.56e-15,64;UBERON:0001015,2.56e-15,64;UBERON:0000383,2.56e-15,64;UBERON:0007500,7.60e-15,59;UBERON:0001981,7.60e-15,59;UBERON:0004537,7.60e-15,59;UBERON:0006965,7.60e-15,59;UBERON:0003102,7.20e-14,99;UBERON:0004237,6.11e-13,10;UBERON:0004695,6.11e-13,10;UBERON:0002111,6.11e-13,10;UBERON:0004178,6.11e-13,10;UBERON:0000055,2.96e-12,68;UBERON:0002199,6.31e-12,46;UBERON:0002416,6.31e-12,46;UBERON:0004872,3.08e-11,83;UBERON:0002097,9.64e-11,41;UBERON:0000947,1.44e-09,21;UBERON:0010191,1.44e-09,21;UBERON:0002049,2.36e-09,78;UBERON:0007798,2.36e-09,78;UBERON:0005256,1.16e-08,122;UBERON:0001135,1.31e-07,15;UBERON:0000490,2.86e-07,148;UBERON:0003834,3.39e-07,5;UBERON:0001533,3.39e-07,5;UBERON:0003498,3.85e-07,5;UBERON:0005985,3.85e-07,5;UBERON:0000992,5.53e-07,13 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,6.31719873426831,0.261185628199839,1.22866968250754,0,0,0,0,0,9.41255205032485,15.0673632005994,7.30310090387373,11.2224543721817,0.369363174230364,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,1.8072355126695,5.54631015250181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,3.97583067623023,1.00267582127178,1.15877215168659,1.5905718941022,0,0.189069634328136,0.221729397462564,0,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,1.98788780678127,3.29239330327907,5.69359477496841,2.29469296599051,4.965357350777,0.560677600142307,0,1.2333377420858,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0.70296429550139,6.55536161343673,4.56377457235559,2.69007624993242,1.996386476944,2.26622122115384,3.08991774744947,0.61246251376468,0.982674538494144,0.309977343527296,1.18800285728205,0.741800787835671,0.910161361938026,1.43723628363248,1.0100166837244,0.250237039743928,1.10825646193673,1.31693286264251,1.22595118319608,1.20190447125277,1.81491493056034,1.25572744982203,0.640672166455702,0.635795703478686,2.40072876867522,1.13357782162283,1.03056216018252,1.11670113798954,2.86919764810153,2.92311015483596,1.00973509697646,0.920498986422993,0.323292113637624,2.13005755509969,2.41805035746337,3.05209066158878,9.66304265816484,5.45492241181669,3.44165514466805,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,11.8530308241316,0,5.32803553781643,1.11106134190236,0,2.07986957055916,2.88662684050547,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0,0,11.2480600784132,6.2153387433578,3.40260233381728,3.13454829459969,2.03443756959773,0,0,0,0,0,0,0.190493682876507,1.14596527667483,0,0,0.514137463516618,0.600686115687835,0,0.336393253036082,0,0.1466765716419,1.55126058909333,0,3.381211010224,0,0,0.771622122786426,0,0.532844358032199,0,0.542621605391443,0,1.62868092146868,0,0,4.82303003295338,8.71533458600294,4.69873058555668,0,0,0,3.59437283237374,1.14861935834114,1.42636905040718,2.17171960001369,0.410952645100767,2.50685348535854,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.585707074963566,0,0,0,1.99267679560631,0.737476674166813,3.47534457872331,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0.561320188866147,0.512556597022804,2.04682899626681,1.60853921143608,0,2.15893571323718,3.01854933032316,2.95657761649713,3.63478100428535,3.48631135379878,0,9.42380410425439,1.74953878978203,0.918515585316854,0.910455840033585,0.393373244878272,0,0.616122696835318,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0.769350375349168,0,0,0,0,0,3.44559322797703,1.30012049207304,0,4.54352375972973,1.54048617114644,0.614014698904518,0.551346289938122,0.214840489736547,0.435050081742686,1.02271952899321,0.356128142586949,2.14870389969272,2.30628080838127,1.14851441245126,0.30347334256665,8.83206543664843,3.1481234683064,4.1822236209636,8.3169066647544,13.3076507579255,2.60979897622522,5.37440235401368,4.72312126248571,0.372158369359667,0,0.190630193923825,1.27948895655667,0,2.54562598340749,5.49464048139461,0.179872457583315,0.274537029736055,0.706874414074119,10.5134890418124,6.34041284692033,10.9527198622135,0,22.1779275564469,6.33900880540533,0.682499557039929,0,10.1707304958219,2.2054613741845,9.28814565337708,9.20746859032902,2.31510213706675,0,4.46402829317949,5.26699946769575,1.97186921772569,0.573645408816206,0.196498082026242,2.85336841185,3.19284957663538,2.74439925886963,6.25660296623814,0,0,3.27155183266741,2.68120910214315,1.08890984861323,0,4.73555909938353,3.36942951335251,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.102268682502155,0,7.77598969154519,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7640976097015,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3989253134773,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.489961987071888,1.21882889212564,0,13.2429245003145,0.0967563312890851,0,0,0,0,0,0.274083849293502,1.58971689362392,0,0,0.480952921509202,0,0,0,0,0,0,0.372757606696298,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37921076862101,0,0,0,0,0,7.05899482279827,4.32110745600634,8.16468400273523,0,0,1.36310417428337,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,3.88062487505873,2.57084640831947,7.7672820610365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| ||
|short_description=p@chr19:55684198..55684213,+ | |||
}} | }} |
Latest revision as of 17:23, 27 July 2015
Short description: | p@chr19:55684198..55684213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:55684198..55684213, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.58e-24 | 32 |
smooth muscle cell | 1.03e-19 | 43 |
smooth muscle myoblast | 1.03e-19 | 43 |
muscle precursor cell | 3.76e-18 | 58 |
myoblast | 3.76e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.76e-18 | 58 |
muscle cell | 2.44e-17 | 55 |
electrically responsive cell | 1.64e-14 | 61 |
electrically active cell | 1.64e-14 | 61 |
fibroblast | 4.68e-14 | 76 |
aortic smooth muscle cell | 6.11e-13 | 10 |
skin fibroblast | 9.28e-12 | 23 |
embryonic cell | 1.88e-10 | 250 |
somatic stem cell | 1.72e-09 | 433 |
stem cell | 8.88e-09 | 441 |
multi fate stem cell | 1.00e-08 | 427 |
mesodermal cell | 1.96e-08 | 121 |
smooth muscle cell of the subclavian artery | 3.39e-07 | 5 |
mesenchymal stem cell of adipose | 4.16e-07 | 8 |
fibroblast of dermis | 7.73e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.69e-12 | 14 |