FFCP PHASE1:Hg19::chr6:32498031..32498042,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3127 | |EntrezGene=3127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4953 | |HGNC=4953 | ||
|TSSclassifier=strong | |||
|UniProt=Q30154 | |UniProt=Q30154 | ||
|association_with_transcript=21bp_to_ENST00000374975_5end | |association_with_transcript=21bp_to_ENST00000374975_5end | ||
|cluster_id=chr6:32498031..32498042,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_4_at_HLA-DRB5_5end | |description=CAGE_peak_4_at_HLA-DRB5_5end | ||
|id=chr6:32498031..32498042,- | |id=chr6:32498031..32498042,- | ||
|ontology_enrichment_celltype=CL:0000860;1.80e-61;33!CL:0002057;1.80e-61;33!CL:0000473;1.08e-55;39!CL:0000234;1.08e-55;39!CL:0000576;1.14e-54;48!CL:0000766;2.25e-33;69!CL:0000451;4.90e-28;10!CL:0000990;9.74e-23;8!CL:0000738;1.46e-21;136!CL:0002087;5.10e-19;104!CL:0000763;2.48e-16;100!CL:0000453;5.02e-16;5!CL:0000840;2.48e-14;5!CL:0000219;9.77e-10;193!CL:0000875;1.57e-09;3!CL:0002396;1.57e-09;3!CL:0002619;2.92e-09;3!CL:0000988;3.28e-09;177!CL:0000235;3.79e-09;6!CL:0002393;7.60e-09;6!CL:0002397;7.60e-09;6!CL:0001014;1.72e-07;2!CL:0001016;1.72e-07;2 | |ontology_enrichment_celltype=CL:0000738!3.96e-62!140;CL:0002087!6.00e-61!119;CL:0002031!2.91e-56!124;CL:0002009!3.22e-56!65;CL:0002194!2.04e-53!63;CL:0000576!2.04e-53!63;CL:0000040!2.04e-53!63;CL:0000559!2.04e-53!63;CL:0002057!1.35e-52!42;CL:0000037!1.02e-50!172;CL:0000566!1.02e-50!172;CL:0000988!1.77e-50!182;CL:0000557!6.72e-50!71;CL:0000860!4.47e-48!45;CL:0000839!2.72e-46!70;CL:0002032!2.72e-45!165;CL:0000837!2.72e-45!165;CL:0000766!4.36e-43!76;CL:0000763!3.05e-34!112;CL:0000049!3.05e-34!112;CL:0000451!1.18e-16!10;CL:0000990!4.58e-14!8;CL:0000945!1.91e-12!24;CL:0000826!1.91e-12!24;CL:0000134!5.33e-12!358;CL:0002320!2.66e-11!365;CL:0002393!1.58e-10!9;CL:0002397!1.58e-10!9;CL:0000838!2.87e-10!52;CL:0000840!5.03e-10!5;CL:0001029!5.03e-10!5;CL:0000542!6.07e-10!53;CL:0000051!6.07e-10!53;CL:0000219!2.53e-09!390;CL:0000236!8.80e-09!14;CL:0000453!1.99e-08!5;CL:0000080!9.90e-08!6;CL:0000048!7.18e-07!430;CL:0000034!9.84e-07!444 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.80e-61;33!CL:0002057;1.80e-61;33!CL:0000473;1.08e-55;39!CL:0000234;1.08e-55;39!CL:0000576;1.14e-54;48!CL:0000766;2.25e-33;69!CL:0000451;4.90e-28;10!CL:0000990;9.74e-23;8!CL:0000738;1.46e-21;136!CL:0002087;5.10e-19;104!CL:0000763;2.48e-16;100!CL:0000453;5.02e-16;5!CL:0000840;2.48e-14;5!CL:0000219;9.77e-10;193!CL:0000875;1.57e-09;3!CL:0002396;1.57e-09;3!CL:0002619;2.92e-09;3!CL:0000988;3.28e-09;177!CL:0000235;3.79e-09;6!CL:0002393;7.60e-09;6!CL:0002397;7.60e-09;6!CL:0001014;1.72e-07;2!CL:0001016;1.72e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.73e-104,61;CL:0002194,4.75e-98,59;CL:0000576,4.75e-98,59;CL:0000040,4.75e-98,59;CL:0000559,4.75e-98,59;CL:0000557,1.20e-93,67;CL:0000473,2.27e-92,48;CL:0000234,2.27e-92,48;CL:0000839,1.29e-86,66;CL:0000860,1.11e-84,42;CL:0002057,1.11e-84,42;CL:0000766,1.46e-78,72;CL:0000738,3.92e-74,136;CL:0002031,1.54e-70,120;CL:0002087,3.53e-68,115;CL:0000763,3.07e-62,108;CL:0000049,3.07e-62,108;CL:0000037,1.24e-57,168;CL:0002032,4.15e-56,161;CL:0000837,4.15e-56,161;CL:0000988,4.21e-56,177;CL:0000451,5.38e-28,10;CL:0000990,1.36e-22,8;CL:0000134,1.58e-20,354;CL:0002320,7.12e-20,361;CL:0000219,1.44e-17,386;CL:0002393,2.29e-16,9;CL:0002397,2.29e-16,9;CL:0000453,7.23e-16,5;CL:0000048,9.52e-15,427;CL:0000034,1.17e-14,441;CL:0000723,2.33e-14,433;CL:0000840,3.01e-14,5;CL:0001029,3.01e-14,5;CL:0000875,9.82e-10,3;CL:0002396,9.82e-10,3;CL:0002619,3.39e-09,3;CL:0000235,4.78e-09,6;CL:0001014,2.16e-07,2;CL:0001016,2.16e-07,2;CL:0000236,2.46e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;8.12e-62;42!CL:0000049;3.58e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-57!102;UBERON:0003061!1.49e-57!102;UBERON:0002193!1.05e-53!112;UBERON:0002371!1.10e-45!80;UBERON:0001474!3.59e-41!86;UBERON:0002405!6.63e-36!115;UBERON:0004765!2.83e-32!101;UBERON:0001434!2.83e-32!101;UBERON:0003081!5.34e-19!216;UBERON:0002204!2.21e-15!167;UBERON:0002384!8.02e-11!375;UBERON:0000178!1.70e-07!15;UBERON:0000179!1.70e-07!15;UBERON:0000463!1.70e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-81,76;UBERON:0001474,1.30e-74,82;UBERON:0004765,5.03e-67,90;UBERON:0002390,1.27e-66,98;UBERON:0003061,1.27e-66,98;UBERON:0002405,1.64e-64,93;UBERON:0002193,2.05e-59,108;UBERON:0001434,3.12e-59,100;UBERON:0002204,5.79e-31,167;UBERON:0003081,3.45e-26,203;UBERON:0002384,5.56e-19,371;UBERON:0000926,9.48e-13,315;UBERON:0004120,9.48e-13,315;UBERON:0006603,9.48e-13,315 | |||
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|short_description=p4@HLA-DRB5 | |short_description=p4@HLA-DRB5 | ||
}} | }} |
Latest revision as of 03:12, 18 September 2015
Short description: | p4@HLA-DRB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HLA-DRB5_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 21bp_to_ENST00000374975_5end |
EntrezGene: | HLA-DRB5 |
HGNC: | 4953 |
UniProt: | Q30154 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-81 | 76 |
bone element | 1.30e-74 | 82 |
skeletal element | 5.03e-67 | 90 |
hematopoietic system | 1.27e-66 | 98 |
blood island | 1.27e-66 | 98 |
immune system | 1.64e-64 | 93 |
hemolymphoid system | 2.05e-59 | 108 |
skeletal system | 3.12e-59 | 100 |
musculoskeletal system | 5.79e-31 | 167 |
lateral plate mesoderm | 3.45e-26 | 203 |
connective tissue | 5.56e-19 | 371 |
mesoderm | 9.48e-13 | 315 |
mesoderm-derived structure | 9.48e-13 | 315 |
presumptive mesoderm | 9.48e-13 | 315 |