FFCP PHASE1:Hg19::chr10:17277196..17277231,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17277196..17277231,+ | |||
|coexpression_cluster_id=C581 | |coexpression_cluster_id=C581 | ||
|description=CAGE_peak_at_chr10:17277196..17277231,+ | |description=CAGE_peak_at_chr10:17277196..17277231,+ | ||
|id=chr10:17277196..17277231,+ | |id=chr10:17277196..17277231,+ | ||
|ontology_enrichment_celltype=CL:0000860;2.52e-14;33!CL:0002057;2.52e-14;33!CL:0000473;2.40e-13;39!CL:0000234;2.40e-13;39!CL:0002620;8.73e-09;23!CL:0000359;2.74e-08;32!CL:0000192;7.95e-08;43!CL:0000187;1.10e-07;55!CL:0000057;3.36e-07;73!CL:0000576;9.94e-07;48 | |ontology_enrichment_celltype=CL:0000055!5.01e-30!180;CL:0002371!1.46e-25!591;CL:0000048!1.80e-23!430;CL:0000144!5.73e-23!625;CL:0000723!5.88e-22!436;CL:0000034!6.20e-21!444;CL:0000057!8.27e-17!75;CL:0000222!3.54e-16!119;CL:0000680!3.36e-13!57;CL:0000056!3.36e-13!57;CL:0000355!3.36e-13!57;CL:0000012!4.95e-13!682;CL:0000548!6.66e-13!679;CL:0000004!6.66e-13!679;CL:0000255!6.66e-13!679;CL:0002057!6.99e-13!42;CL:0000183!1.06e-12!59;CL:0000187!2.15e-12!54;CL:0000393!8.81e-12!60;CL:0000211!8.81e-12!60;CL:0002320!1.18e-11!365;CL:0002009!2.22e-11!65;CL:0000860!3.98e-11!45;CL:0002194!5.12e-11!63;CL:0000576!5.12e-11!63;CL:0000040!5.12e-11!63;CL:0000559!5.12e-11!63;CL:0000557!1.57e-10!71;CL:0000134!2.02e-10!358;CL:0000219!3.52e-10!390;CL:0000192!3.96e-10!42;CL:0000514!3.96e-10!42;CL:0000839!2.28e-09!70;CL:0002620!1.24e-08!23;CL:0000766!1.34e-08!76;CL:0000003!1.42e-08!722;CL:0000359!1.93e-08!32 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.52e-14;33!CL:0002057;2.52e-14;33!CL:0000473;2.40e-13;39!CL:0000234;2.40e-13;39!CL:0002620;8.73e-09;23!CL:0000359;2.74e-08;32!CL:0000192;7.95e-08;43!CL:0000187;1.10e-07;55!CL:0000057;3.36e-07;73!CL:0000576;9.94e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.77e-25,427;CL:0000723,1.48e-23,433;CL:0000034,1.83e-22,441;CL:0000057,1.89e-17,76;CL:0000222,6.39e-17,121;CL:0000473,8.50e-15,48;CL:0000234,8.50e-15,48;CL:0000680,9.00e-14,58;CL:0000056,9.00e-14,58;CL:0000355,9.00e-14,58;CL:0000860,5.10e-13,42;CL:0002057,5.10e-13,42;CL:0000187,6.06e-13,55;CL:0002009,9.83e-13,61;CL:0002194,2.32e-12,59;CL:0000576,2.32e-12,59;CL:0000040,2.32e-12,59;CL:0000559,2.32e-12,59;CL:0000393,2.60e-12,61;CL:0000211,2.60e-12,61;CL:0002320,2.65e-12,361;CL:0000557,7.95e-12,67;CL:0000134,5.10e-11,354;CL:0000219,5.63e-11,386;CL:0000839,1.25e-10,66;CL:0000192,1.28e-10,43;CL:0000514,1.28e-10,43;CL:0000766,8.04e-10,72;CL:0002620,8.34e-09,23;CL:0000359,1.32e-08,32 | |||
|ontology_enrichment_development_v019=CL:0002057;6.76e-10;42!CL:0000514;7.95e-08;43!CL:0000355;8.18e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;4.84e-09;33!UBERON:0004571;4.84e-09;33!UBERON:0001637;5.33e-09;42!UBERON:0003509;5.33e-09;42!UBERON:0004572;5.33e-09;42!UBERON:0007500;1.58e-07;56!UBERON:0001981;1.58e-07;56!UBERON:0004537;1.58e-07;56!UBERON:0002049;2.26e-07;75!UBERON:0007798;2.26e-07;75!UBERON:0000055;2.58e-07;65!UBERON:0000947;3.80e-07;21!UBERON:0010191;3.80e-07;21 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.43e-25!167;UBERON:0003081!3.75e-22!216;UBERON:0000914!1.30e-17!83;UBERON:0002329!1.30e-17!83;UBERON:0003077!1.30e-17!83;UBERON:0003059!1.30e-17!83;UBERON:0007282!1.30e-17!83;UBERON:0009618!1.30e-17!83;UBERON:0007285!1.30e-17!83;UBERON:0004290!3.55e-16!70;UBERON:0002049!2.10e-15!79;UBERON:0007798!2.10e-15!79;UBERON:0004535!1.15e-14!110;UBERON:0000055!7.91e-14!69;UBERON:0001009!1.25e-13!113;UBERON:0000926!2.55e-13!448;UBERON:0004120!2.55e-13!448;UBERON:0006603!2.55e-13!448;UBERON:0004872!4.92e-13!84;UBERON:0001134!1.06e-12!61;UBERON:0002036!1.06e-12!61;UBERON:0003082!1.06e-12!61;UBERON:0000486!1.37e-12!82;UBERON:0001981!4.18e-12!60;UBERON:0007500!4.18e-12!60;UBERON:0004537!4.18e-12!60;UBERON:0006965!4.18e-12!60;UBERON:0001637!4.54e-12!42;UBERON:0003509!4.54e-12!42;UBERON:0004572!4.54e-12!42;UBERON:0002385!5.79e-12!63;UBERON:0001015!5.79e-12!63;UBERON:0000383!5.79e-12!63;UBERON:0002384!1.17e-11!375;UBERON:0004765!1.63e-11!101;UBERON:0001434!1.63e-11!101;UBERON:0002371!3.55e-11!80;UBERON:0001474!4.09e-10!86;UBERON:0004573!8.10e-10!33;UBERON:0004571!8.10e-10!33;UBERON:0002193!3.69e-08!112;UBERON:0005256!7.20e-08!143;UBERON:0003914!3.33e-07!118;UBERON:0000947!3.70e-07!21;UBERON:0010191!3.70e-07!21;UBERON:0002390!6.14e-07!102;UBERON:0003061!6.14e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.84e-09;33!UBERON:0004571;4.84e-09;33!UBERON:0001637;5.33e-09;42!UBERON:0003509;5.33e-09;42!UBERON:0004572;5.33e-09;42!UBERON:0007500;1.58e-07;56!UBERON:0001981;1.58e-07;56!UBERON:0004537;1.58e-07;56!UBERON:0002049;2.26e-07;75!UBERON:0007798;2.26e-07;75!UBERON:0000055;2.58e-07;65!UBERON:0000947;3.80e-07;21!UBERON:0010191;3.80e-07;21 | |||
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| ||
|short_description=p@chr10:17277196..17277231,+ | |short_description=p@chr10:17277196..17277231,+ | ||
}} | }} |
Latest revision as of 12:17, 23 July 2015
Short description: | p@chr10:17277196..17277231, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17277196..17277231, + |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.77e-25 | 427 |
somatic stem cell | 1.48e-23 | 433 |
stem cell | 1.83e-22 | 441 |
fibroblast | 1.89e-17 | 76 |
mesodermal cell | 6.39e-17 | 121 |
defensive cell | 8.50e-15 | 48 |
phagocyte | 8.50e-15 | 48 |
muscle precursor cell | 9.00e-14 | 58 |
myoblast | 9.00e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.00e-14 | 58 |
classical monocyte | 5.10e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-13 | 42 |
muscle cell | 6.06e-13 | 55 |
macrophage dendritic cell progenitor | 9.83e-13 | 61 |
monopoietic cell | 2.32e-12 | 59 |
monocyte | 2.32e-12 | 59 |
monoblast | 2.32e-12 | 59 |
promonocyte | 2.32e-12 | 59 |
electrically responsive cell | 2.60e-12 | 61 |
electrically active cell | 2.60e-12 | 61 |
connective tissue cell | 2.65e-12 | 361 |
granulocyte monocyte progenitor cell | 7.95e-12 | 67 |
mesenchymal cell | 5.10e-11 | 354 |
motile cell | 5.63e-11 | 386 |
myeloid lineage restricted progenitor cell | 1.25e-10 | 66 |
smooth muscle cell | 1.28e-10 | 43 |
smooth muscle myoblast | 1.28e-10 | 43 |
myeloid leukocyte | 8.04e-10 | 72 |
skin fibroblast | 8.34e-09 | 23 |
vascular associated smooth muscle cell | 1.32e-08 | 32 |