FFCP PHASE1:Hg19::chr10:29947909..29947923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:29947909..29947923,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:29947909..29947923,- | |description=CAGE_peak_at_chr10:29947909..29947923,- | ||
|id=chr10:29947909..29947923,- | |id=chr10:29947909..29947923,- | ||
|ontology_enrichment_celltype=CL:0000860;5.38e-64;33!CL:0002057;5.38e-64;33!CL:0000473;2.63e-42;39!CL:0000234;2.63e-42;39!CL:0000576;6.22e-37;48!CL:0000766;3.36e-27;69!CL:0000094;1.01e-18;8!CL:0000081;2.58e-13;11!CL:0002087;6.60e-13;104!CL:0000763;2.61e-12;100!CL:0000738;3.55e-10;136!CL:0000226;5.82e-10;3!CL:0000842;5.82e-10;3!CL:0000767;8.66e-10;3!CL:0000623;1.01e-09;3!CL:0002393;6.80e-09;6!CL:0002397;6.80e-09;6!CL:0000771;8.00e-08;2!CL:0001014;3.25e-07;2!CL:0001016;3.25e-07;2 | |ontology_enrichment_celltype=CL:0002057!8.79e-39!42;CL:0000860!3.74e-35!45;CL:0000766!1.53e-27!76;CL:0002009!1.68e-23!65;CL:0000557!9.74e-23!71;CL:0002194!1.22e-21!63;CL:0000576!1.22e-21!63;CL:0000040!1.22e-21!63;CL:0000559!1.22e-21!63;CL:0000839!1.95e-20!70;CL:0000738!8.20e-18!140;CL:0000763!3.24e-15!112;CL:0000049!3.24e-15!112;CL:0002087!2.09e-13!119;CL:0002031!7.11e-13!124;CL:0000048!7.79e-12!430;CL:0000723!1.35e-11!436;CL:0000034!2.81e-11!444;CL:0002371!3.22e-11!591;CL:0000037!5.74e-11!172;CL:0000566!5.74e-11!172;CL:0000988!6.28e-11!182;CL:0000144!9.56e-11!625;CL:0002032!3.70e-10!165;CL:0000837!3.70e-10!165;CL:0002320!7.09e-10!365;CL:0000134!8.23e-10!358;CL:0000012!3.81e-09!682;CL:0000548!7.25e-09!679;CL:0000004!7.25e-09!679;CL:0000255!7.25e-09!679;CL:0000094!2.57e-08!8;CL:0000219!4.80e-08!390;CL:0000063!2.06e-07!578;CL:0000081!6.56e-07!11;CL:0000003!7.30e-07!722 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;5.38e-64;33!CL:0002057;5.38e-64;33!CL:0000473;2.63e-42;39!CL:0000234;2.63e-42;39!CL:0000576;6.22e-37;48!CL:0000766;3.36e-27;69!CL:0000094;1.01e-18;8!CL:0000081;2.58e-13;11!CL:0002087;6.60e-13;104!CL:0000763;2.61e-12;100!CL:0000738;3.55e-10;136!CL:0000226;5.82e-10;3!CL:0000842;5.82e-10;3!CL:0000767;8.66e-10;3!CL:0000623;1.01e-09;3!CL:0002393;6.80e-09;6!CL:0002397;6.80e-09;6!CL:0000771;8.00e-08;2!CL:0001014;3.25e-07;2!CL:0001016;3.25e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.52e-70,42;CL:0002057,1.52e-70,42;CL:0000473,1.35e-60,48;CL:0000234,1.35e-60,48;CL:0000766,2.72e-57,72;CL:0002009,3.24e-51,61;CL:0002194,1.12e-46,59;CL:0000576,1.12e-46,59;CL:0000040,1.12e-46,59;CL:0000559,1.12e-46,59;CL:0000557,7.30e-46,67;CL:0000738,4.97e-42,136;CL:0000839,7.27e-41,66;CL:0000763,3.41e-39,108;CL:0000049,3.41e-39,108;CL:0000037,8.75e-32,168;CL:0002087,1.04e-31,115;CL:0000988,1.44e-29,177;CL:0002032,1.02e-28,161;CL:0000837,1.02e-28,161;CL:0002031,3.30e-28,120;CL:0000094,8.72e-19,8;CL:0000134,5.63e-15,354;CL:0002320,1.96e-14,361;CL:0000048,9.09e-14,427;CL:0000034,1.20e-13,441;CL:0000723,2.18e-13,433;CL:0000081,2.33e-13,11;CL:0000219,1.58e-12,386;CL:0000226,7.69e-10,3;CL:0000842,7.69e-10,3;CL:0000767,8.17e-10,3;CL:0000623,1.07e-09,3;CL:0000825,1.07e-09,3;CL:0000771,8.14e-08,2;CL:0001014,3.31e-07,2;CL:0001016,3.31e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-52;42!CL:0000049;2.65e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.79e-18!80;UBERON:0004765!8.71e-18!101;UBERON:0001434!8.71e-18!101;UBERON:0003081!1.67e-17!216;UBERON:0001474!6.08e-17!86;UBERON:0002193!3.35e-15!112;UBERON:0002390!8.64e-15!102;UBERON:0003061!8.64e-15!102;UBERON:0002204!4.98e-14!167;UBERON:0002405!1.95e-12!115;UBERON:0002384!6.87e-09!375;UBERON:0000926!2.44e-07!448;UBERON:0004120!2.44e-07!448;UBERON:0006603!2.44e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.11e-39,76;UBERON:0001474,7.06e-36,82;UBERON:0002390,1.04e-34,98;UBERON:0003061,1.04e-34,98;UBERON:0004765,6.64e-32,90;UBERON:0002193,1.30e-30,108;UBERON:0002405,1.37e-30,93;UBERON:0001434,7.89e-28,100;UBERON:0003081,6.80e-20,203;UBERON:0002204,1.79e-18,167;UBERON:0002384,1.07e-13,371;UBERON:0000926,4.89e-11,315;UBERON:0004120,4.89e-11,315;UBERON:0006603,4.89e-11,315 | |||
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| ||
|short_description=p@chr10:29947909..29947923,- | |short_description=p@chr10:29947909..29947923,- | ||
}} | }} |
Latest revision as of 13:03, 23 July 2015
Short description: | p@chr10:29947909..29947923, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:29947909..29947923, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.11e-39 | 76 |
bone element | 7.06e-36 | 82 |
hematopoietic system | 1.04e-34 | 98 |
blood island | 1.04e-34 | 98 |
skeletal element | 6.64e-32 | 90 |
hemolymphoid system | 1.30e-30 | 108 |
immune system | 1.37e-30 | 93 |
skeletal system | 7.89e-28 | 100 |
lateral plate mesoderm | 6.80e-20 | 203 |
musculoskeletal system | 1.79e-18 | 167 |
connective tissue | 1.07e-13 | 371 |
mesoderm | 4.89e-11 | 315 |
mesoderm-derived structure | 4.89e-11 | 315 |
presumptive mesoderm | 4.89e-11 | 315 |