FFCP PHASE1:Hg19::chr18:9775432..9775441,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:9775432..9775441,+ | |||
|coexpression_cluster_id=C1448 | |coexpression_cluster_id=C1448 | ||
|description=CAGE_peak_at_chr18:9775432..9775441,+ | |description=CAGE_peak_at_chr18:9775432..9775441,+ | ||
|id=chr18:9775432..9775441,+ | |id=chr18:9775432..9775441,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.64e-58!42;CL:0000860!4.68e-54!45;CL:0000766!2.39e-37!76;CL:0002194!5.78e-37!63;CL:0000576!5.78e-37!63;CL:0000040!5.78e-37!63;CL:0000559!5.78e-37!63;CL:0002009!9.75e-36!65;CL:0000839!5.71e-33!70;CL:0000557!1.84e-32!71;CL:0000763!3.22e-24!112;CL:0000049!3.22e-24!112;CL:0000738!6.06e-23!140;CL:0002087!1.37e-22!119;CL:0000037!6.29e-18!172;CL:0000566!6.29e-18!172;CL:0002031!3.60e-17!124;CL:0000988!1.02e-16!182;CL:0002032!3.14e-15!165;CL:0000837!3.14e-15!165;CL:0002393!9.32e-13!9;CL:0002397!9.32e-13!9;CL:0000842!1.00e-10!3;CL:0000224!2.96e-08!4 | |ontology_enrichment_celltype=CL:0002057!3.64e-58!42;CL:0000860!4.68e-54!45;CL:0000766!2.39e-37!76;CL:0002194!5.78e-37!63;CL:0000576!5.78e-37!63;CL:0000040!5.78e-37!63;CL:0000559!5.78e-37!63;CL:0002009!9.75e-36!65;CL:0000839!5.71e-33!70;CL:0000557!1.84e-32!71;CL:0000763!3.22e-24!112;CL:0000049!3.22e-24!112;CL:0000738!6.06e-23!140;CL:0002087!1.37e-22!119;CL:0000037!6.29e-18!172;CL:0000566!6.29e-18!172;CL:0002031!3.60e-17!124;CL:0000988!1.02e-16!182;CL:0002032!3.14e-15!165;CL:0000837!3.14e-15!165;CL:0002393!9.32e-13!9;CL:0002397!9.32e-13!9;CL:0000842!1.00e-10!3;CL:0000224!2.96e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-27;33!CL:0002057;4.38e-27;33!CL:0000473;4.16e-20;39!CL:0000234;4.16e-20;39!CL:0000771;1.07e-13;2!CL:0000576;8.68e-12;48!CL:0000766;1.55e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.63e-21,42;CL:0002057,2.63e-21,42;CL:0000473,1.13e-18,48;CL:0000234,1.13e-18,48;CL:0000766,1.22e-16,72;CL:0002194,5.65e-15,59;CL:0000576,5.65e-15,59;CL:0000040,5.65e-15,59;CL:0000559,5.65e-15,59;CL:0002009,1.70e-14,61;CL:0000771,1.07e-13,2;CL:0000839,2.00e-13,66;CL:0000557,3.14e-13,67;CL:0000763,3.72e-11,108;CL:0000049,3.72e-11,108;CL:0000738,7.24e-09,136;CL:0002087,8.87e-08,115;CL:0002032,1.75e-07,161;CL:0000837,1.75e-07,161;CL:0002031,1.86e-07,120;CL:0000037,3.63e-07,168;CL:0000988,8.50e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.92e-26;1!CL:0002057;1.01e-16;42!UBERON:0003056;1.41e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.23e-30!102;UBERON:0003061!9.23e-30!102;UBERON:0002371!1.85e-28!80;UBERON:0002193!8.96e-27!112;UBERON:0001474!3.00e-26!86;UBERON:0004765!7.37e-22!101;UBERON:0001434!7.37e-22!101;UBERON:0002405!5.51e-21!115;UBERON:0003081!5.48e-12!216;UBERON:0002204!7.67e-12!167;UBERON:0000941!7.01e-09!1;UBERON:0004904!7.01e-09!1;UBERON:0002464!7.01e-09!1;UBERON:0001021!7.01e-09!1;UBERON:0001785!7.01e-09!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | |ontology_enrichment_uberon=UBERON:0002390!9.23e-30!102;UBERON:0003061!9.23e-30!102;UBERON:0002371!1.85e-28!80;UBERON:0002193!8.96e-27!112;UBERON:0001474!3.00e-26!86;UBERON:0004765!7.37e-22!101;UBERON:0001434!7.37e-22!101;UBERON:0002405!5.51e-21!115;UBERON:0003081!5.48e-12!216;UBERON:0002204!7.67e-12!167;UBERON:0000941!7.01e-09!1;UBERON:0004904!7.01e-09!1;UBERON:0002464!7.01e-09!1;UBERON:0001021!7.01e-09!1;UBERON:0001785!7.01e-09!1;UBERON:0001882!4.07e-08!1;UBERON:0005403!4.07e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.92e-26;1!UBERON:0001785;5.92e-26;1!UBERON:0002464;5.92e-26;1!UBERON:0004904;5.92e-26;1!UBERON:0001021;5.92e-26;1!UBERON:0003714;1.07e-13;2!UBERON:0005162;1.07e-13;2!UBERON:0000122;1.07e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.61e-26,1;UBERON:0001785,4.61e-26,1;UBERON:0002464,4.61e-26,1;UBERON:0004904,4.61e-26,1;UBERON:0001021,4.61e-26,1;UBERON:0003902,4.61e-26,1;UBERON:0005425,4.61e-26,1;UBERON:0003714,9.40e-14,2;UBERON:0005162,9.40e-14,2;UBERON:0000122,9.40e-14,2;UBERON:0002371,1.07e-11,76;UBERON:0001474,7.40e-11,82;UBERON:0004765,6.57e-10,90;UBERON:0002405,1.36e-09,93;UBERON:0002390,4.12e-09,98;UBERON:0003061,4.12e-09,98;UBERON:0001434,6.23e-09,100;UBERON:0002193,2.81e-08,108;UBERON:0001781,1.59e-07,4 | |||
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|short_description=p@chr18:9775432..9775441,+ | |short_description=p@chr18:9775432..9775441,+ | ||
}} | }} |
Latest revision as of 22:26, 24 September 2015
Short description: | p@chr18:9775432..9775441, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:9775432..9775441, + |
Coexpression cluster: | C1448_CD14_Basophils_Neutrophils_Peripheral_Eosinophils_CD14CD16_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.63e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.63e-21 | 42 |
defensive cell | 1.13e-18 | 48 |
phagocyte | 1.13e-18 | 48 |
myeloid leukocyte | 1.22e-16 | 72 |
monopoietic cell | 5.65e-15 | 59 |
monocyte | 5.65e-15 | 59 |
monoblast | 5.65e-15 | 59 |
promonocyte | 5.65e-15 | 59 |
macrophage dendritic cell progenitor | 1.70e-14 | 61 |
eosinophil | 1.07e-13 | 2 |
myeloid lineage restricted progenitor cell | 2.00e-13 | 66 |
granulocyte monocyte progenitor cell | 3.14e-13 | 67 |
myeloid cell | 3.72e-11 | 108 |
common myeloid progenitor | 3.72e-11 | 108 |
leukocyte | 7.24e-09 | 136 |
nongranular leukocyte | 8.87e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.75e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.86e-07 | 120 |
hematopoietic stem cell | 3.63e-07 | 168 |
hematopoietic cell | 8.50e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.61e-26 | 1 |
cranial nerve | 4.61e-26 | 1 |
nerve trunk | 4.61e-26 | 1 |
nerve connecting eye with brain | 4.61e-26 | 1 |
nerve | 4.61e-26 | 1 |
retinal neural layer | 4.61e-26 | 1 |
presumptive neural retina | 4.61e-26 | 1 |
neural tissue | 9.40e-14 | 2 |
multi cell component structure | 9.40e-14 | 2 |
neuron projection bundle | 9.40e-14 | 2 |
bone marrow | 1.07e-11 | 76 |
bone element | 7.40e-11 | 82 |
skeletal element | 6.57e-10 | 90 |
immune system | 1.36e-09 | 93 |
hematopoietic system | 4.12e-09 | 98 |
blood island | 4.12e-09 | 98 |
skeletal system | 6.23e-09 | 100 |
hemolymphoid system | 2.81e-08 | 108 |
layer of retina | 1.59e-07 | 4 |