FFCP PHASE1:Hg19::chr18:21104030..21104064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29919 | |EntrezGene=29919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24326 | |HGNC=24326 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-309bp_to_uc010xay.1_5end | |association_with_transcript=-309bp_to_uc010xay.1_5end | ||
|cluster_id=chr18:21104030..21104064,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_C18orf8_5end | |description=CAGE_peak_3_at_C18orf8_5end | ||
|id=chr18:21104030..21104064,+ | |id=chr18:21104030..21104064,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.91e-51!42;CL:0000860!1.45e-47!45;CL:0002194!1.86e-31!63;CL:0000576!1.86e-31!63;CL:0000040!1.86e-31!63;CL:0000559!1.86e-31!63;CL:0002009!2.66e-30!65;CL:0000839!1.06e-27!70;CL:0000766!2.40e-27!76;CL:0000557!3.18e-27!71;CL:0002087!2.60e-19!119;CL:0002031!3.02e-18!124;CL:0000738!1.01e-16!140;CL:0000763!1.75e-16!112;CL:0000049!1.75e-16!112;CL:0002032!4.37e-13!165;CL:0000837!4.37e-13!165;CL:0000037!2.92e-12!172;CL:0000566!2.92e-12!172;CL:0000988!3.40e-11!182 | |ontology_enrichment_celltype=CL:0002057!1.91e-51!42;CL:0000860!1.45e-47!45;CL:0002194!1.86e-31!63;CL:0000576!1.86e-31!63;CL:0000040!1.86e-31!63;CL:0000559!1.86e-31!63;CL:0002009!2.66e-30!65;CL:0000839!1.06e-27!70;CL:0000766!2.40e-27!76;CL:0000557!3.18e-27!71;CL:0002087!2.60e-19!119;CL:0002031!3.02e-18!124;CL:0000738!1.01e-16!140;CL:0000763!1.75e-16!112;CL:0000049!1.75e-16!112;CL:0002032!4.37e-13!165;CL:0000837!4.37e-13!165;CL:0000037!2.92e-12!172;CL:0000566!2.92e-12!172;CL:0000988!3.40e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-84;33!CL:0002057;5.08e-84;33!CL:0000473;1.68e-61;39!CL:0000234;1.68e-61;39!CL:0000576;9.14e-39;48!CL:0000766;2.51e-26;69!CL:0000319;1.47e-11;1!CL:0000763;6.86e-11;100!CL:0002087;1.58e-09;104!CL:0000219;8.53e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.95e-70,42;CL:0002057,8.95e-70,42;CL:0000473,8.47e-61,48;CL:0000234,8.47e-61,48;CL:0002194,3.18e-48,59;CL:0000576,3.18e-48,59;CL:0000040,3.18e-48,59;CL:0000559,3.18e-48,59;CL:0002009,1.34e-46,61;CL:0000766,3.82e-44,72;CL:0000839,5.78e-43,66;CL:0000557,2.66e-42,67;CL:0000763,7.85e-29,108;CL:0000049,7.85e-29,108;CL:0002087,6.97e-24,115;CL:0002031,8.40e-23,120;CL:0000738,1.81e-22,136;CL:0002032,1.23e-18,161;CL:0000837,1.23e-18,161;CL:0000037,9.14e-18,168;CL:0000988,9.57e-17,177;CL:0000319,1.19e-11,1;CL:0000134,4.06e-07,354;CL:0002320,6.30e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.36e-55;42!CL:0000049;1.90e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.47e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.19e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.81e-23!80;UBERON:0001474!2.13e-21!86;UBERON:0002390!3.31e-20!102;UBERON:0003061!3.31e-20!102;UBERON:0002193!8.30e-18!112;UBERON:0004765!2.66e-17!101;UBERON:0001434!2.66e-17!101;UBERON:0002405!3.61e-17!115;UBERON:0002204!6.09e-09!167;UBERON:0003081!2.64e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.81e-23!80;UBERON:0001474!2.13e-21!86;UBERON:0002390!3.31e-20!102;UBERON:0003061!3.31e-20!102;UBERON:0002193!8.30e-18!112;UBERON:0004765!2.66e-17!101;UBERON:0001434!2.66e-17!101;UBERON:0002405!3.61e-17!115;UBERON:0002204!6.09e-09!167;UBERON:0003081!2.64e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.18e-37,76;UBERON:0001474,2.89e-34,82;UBERON:0004765,4.63e-31,90;UBERON:0002405,5.34e-30,93;UBERON:0002390,2.27e-28,98;UBERON:0003061,2.27e-28,98;UBERON:0001434,9.15e-28,100;UBERON:0002193,1.46e-25,108;UBERON:0002204,9.06e-16,167;UBERON:0003081,1.47e-12,203;UBERON:0000926,3.28e-07,315;UBERON:0004120,3.28e-07,315;UBERON:0006603,3.28e-07,315 | |||
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| ||
|short_description=p3@C18orf8 | |short_description=p3@C18orf8 | ||
}} | }} |
Latest revision as of 23:42, 18 September 2015
Short description: | p3@C18orf8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C18orf8_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -309bp_to_uc010xay.1_5end |
EntrezGene: | C18orf8 |
HGNC: | 24326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.95e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.95e-70 | 42 |
defensive cell | 8.47e-61 | 48 |
phagocyte | 8.47e-61 | 48 |
monopoietic cell | 3.18e-48 | 59 |
monocyte | 3.18e-48 | 59 |
monoblast | 3.18e-48 | 59 |
promonocyte | 3.18e-48 | 59 |
macrophage dendritic cell progenitor | 1.34e-46 | 61 |
myeloid leukocyte | 3.82e-44 | 72 |
myeloid lineage restricted progenitor cell | 5.78e-43 | 66 |
granulocyte monocyte progenitor cell | 2.66e-42 | 67 |
myeloid cell | 7.85e-29 | 108 |
common myeloid progenitor | 7.85e-29 | 108 |
nongranular leukocyte | 6.97e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.40e-23 | 120 |
leukocyte | 1.81e-22 | 136 |
hematopoietic oligopotent progenitor cell | 1.23e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-18 | 161 |
hematopoietic stem cell | 9.14e-18 | 168 |
hematopoietic cell | 9.57e-17 | 177 |
mucus secreting cell | 1.19e-11 | 1 |
mesenchymal cell | 4.06e-07 | 354 |
connective tissue cell | 6.30e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.18e-37 | 76 |
bone element | 2.89e-34 | 82 |
skeletal element | 4.63e-31 | 90 |
immune system | 5.34e-30 | 93 |
hematopoietic system | 2.27e-28 | 98 |
blood island | 2.27e-28 | 98 |
skeletal system | 9.15e-28 | 100 |
hemolymphoid system | 1.46e-25 | 108 |
musculoskeletal system | 9.06e-16 | 167 |
lateral plate mesoderm | 1.47e-12 | 203 |
mesoderm | 3.28e-07 | 315 |
mesoderm-derived structure | 3.28e-07 | 315 |
presumptive mesoderm | 3.28e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.19e-11 | 1 |