FFCP PHASE1:Hg19::chr1:109235177..109235226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55119 | |EntrezGene=55119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25512 | |HGNC=25512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_ENST00000370021_5end | |association_with_transcript=214bp_to_ENST00000370021_5end | ||
|cluster_id=chr1:109235177..109235226,+ | |||
|description=CAGE_peak_3_at_PRPF38B_5end | |description=CAGE_peak_3_at_PRPF38B_5end | ||
|id=chr1:109235177..109235226,+ | |id=chr1:109235177..109235226,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.46e-31!172;CL:0000566!3.46e-31!172;CL:0002032!7.05e-29!165;CL:0000837!7.05e-29!165;CL:0000988!6.67e-28!182;CL:0000738!1.55e-20!140;CL:0000542!7.30e-17!53;CL:0000051!7.30e-17!53;CL:0000838!1.22e-16!52;CL:0002031!3.93e-16!124;CL:0002087!2.03e-15!119;CL:0000763!6.14e-13!112;CL:0000049!6.14e-13!112;CL:0000084!1.00e-10!25;CL:0000827!1.00e-10!25;CL:0000791!3.78e-09!18;CL:0000789!3.78e-09!18;CL:0002420!3.78e-09!18;CL:0002419!3.78e-09!18;CL:0000790!3.78e-09!18;CL:0000625!5.62e-07!11 | |ontology_enrichment_celltype=CL:0000037!3.46e-31!172;CL:0000566!3.46e-31!172;CL:0002032!7.05e-29!165;CL:0000837!7.05e-29!165;CL:0000988!6.67e-28!182;CL:0000738!1.55e-20!140;CL:0000542!7.30e-17!53;CL:0000051!7.30e-17!53;CL:0000838!1.22e-16!52;CL:0002031!3.93e-16!124;CL:0002087!2.03e-15!119;CL:0000763!6.14e-13!112;CL:0000049!6.14e-13!112;CL:0000084!1.00e-10!25;CL:0000827!1.00e-10!25;CL:0000791!3.78e-09!18;CL:0000789!3.78e-09!18;CL:0002420!3.78e-09!18;CL:0002419!3.78e-09!18;CL:0000790!3.78e-09!18;CL:0000625!5.62e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.80e-11;25!CL:0000542;9.03e-11;53!CL:0000791;3.32e-09;18!CL:0000789;3.32e-09;18!CL:0002419;3.32e-09;18!CL:0000625;5.02e-07;11!CL:0000945;8.01e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.17e-31,168;CL:0002032,2.50e-29,161;CL:0000837,2.50e-29,161;CL:0000988,5.01e-29,177;CL:0000738,7.13e-21,136;CL:0000542,6.09e-17,53;CL:0000051,6.09e-17,53;CL:0000838,1.02e-16,52;CL:0002031,2.36e-16,120;CL:0002087,1.27e-15,115;CL:0000763,3.43e-13,108;CL:0000049,3.43e-13,108;CL:0000084,9.00e-11,25;CL:0000827,9.00e-11,25;CL:0000791,3.45e-09,18;CL:0000789,3.45e-09,18;CL:0002420,3.45e-09,18;CL:0002419,3.45e-09,18;CL:0000790,3.45e-09,18;CL:0000625,5.26e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;9.03e-11;53!CL:0000790;3.32e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!2.19e-12!51;DOID:0060083!2.19e-12!51;DOID:1240!2.21e-12!39;DOID:8692!6.18e-11!31 | |ontology_enrichment_disease=DOID:2531!2.19e-12!51;DOID:0060083!2.19e-12!51;DOID:1240!2.21e-12!39;DOID:8692!6.18e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.63e-10;31!DOID:1240;8.99e-10;39!DOID:2531;7.76e-08;51!DOID:0060083;7.76e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.95e-12,39;DOID:2531,2.08e-12,51;DOID:0060083,2.08e-12,51;DOID:8692,5.53e-11,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-07!102;UBERON:0003061!1.71e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!1.71e-07!102;UBERON:0003061!1.71e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.24e-07,98;UBERON:0003061,1.24e-07,98 | |||
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| ||
|short_description=p3@PRPF38B | |short_description=p3@PRPF38B | ||
}} | }} |
Latest revision as of 19:54, 15 September 2015
Short description: | p3@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRPF38B_5end |
Coexpression cluster: | NA |
Association with transcript: | 214bp_to_ENST00000370021_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.17e-31 | 168 |
hematopoietic oligopotent progenitor cell | 2.50e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-29 | 161 |
hematopoietic cell | 5.01e-29 | 177 |
leukocyte | 7.13e-21 | 136 |
lymphocyte | 6.09e-17 | 53 |
common lymphoid progenitor | 6.09e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.02e-16 | 52 |
hematopoietic lineage restricted progenitor cell | 2.36e-16 | 120 |
nongranular leukocyte | 1.27e-15 | 115 |
myeloid cell | 3.43e-13 | 108 |
common myeloid progenitor | 3.43e-13 | 108 |
T cell | 9.00e-11 | 25 |
pro-T cell | 9.00e-11 | 25 |
mature alpha-beta T cell | 3.45e-09 | 18 |
alpha-beta T cell | 3.45e-09 | 18 |
immature T cell | 3.45e-09 | 18 |
mature T cell | 3.45e-09 | 18 |
immature alpha-beta T cell | 3.45e-09 | 18 |
CD8-positive, alpha-beta T cell | 5.26e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.24e-07 | 98 |
blood island | 1.24e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.95e-12 | 39 |
hematologic cancer | 2.08e-12 | 51 |
immune system cancer | 2.08e-12 | 51 |
myeloid leukemia | 5.53e-11 | 31 |