FFCP PHASE1:Hg19::chr3:13083919..13083940,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:13083919..13083940,- | |||
|coexpression_cluster_id=C1198 | |coexpression_cluster_id=C1198 | ||
|description=CAGE_peak_at_chr3:13083919..13083940,- | |description=CAGE_peak_at_chr3:13083919..13083940,- | ||
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|ontology_enrichment_celltype=CL:0002605!2.06e-11!3;CL:0000047!3.94e-07!8 | |ontology_enrichment_celltype=CL:0002605!2.06e-11!3;CL:0000047!3.94e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002605;5.49e-17;3!CL:0000047;8.81e-12;2!CL:0002319;8.22e-09;25!CL:0000128;1.59e-07;7!CL:0000126;1.59e-07;7!CL:0000127;1.59e-07;7 | |ontology_enrichment_celltype_v019=CL:0002605;5.49e-17;3!CL:0000047;8.81e-12;2!CL:0002319;8.22e-09;25!CL:0000128;1.59e-07;7!CL:0000126;1.59e-07;7!CL:0000127;1.59e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.52e-17,3;CL:0000047,7.85e-11,8;CL:0002319,8.19e-09,25;CL:0000128,1.59e-07,7;CL:0000126,1.59e-07,7;CL:0000127,1.59e-07,7;CL:0002453,1.59e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.86e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.86e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.65e-91!57;UBERON:0005068!1.65e-91!57;UBERON:0006241!1.65e-91!57;UBERON:0007135!1.65e-91!57;UBERON:0001017!7.68e-89!82;UBERON:0005743!8.87e-88!86;UBERON:0000073!4.33e-85!94;UBERON:0001016!4.33e-85!94;UBERON:0002616!7.89e-80!59;UBERON:0000955!1.92e-77!69;UBERON:0006238!1.92e-77!69;UBERON:0001893!6.79e-77!34;UBERON:0001869!1.26e-76!32;UBERON:0002020!1.74e-76!34;UBERON:0003528!1.74e-76!34;UBERON:0002780!3.89e-76!41;UBERON:0001890!3.89e-76!41;UBERON:0006240!3.89e-76!41;UBERON:0003080!3.73e-74!42;UBERON:0002791!7.82e-74!33;UBERON:0003075!2.04e-63!86;UBERON:0007284!2.04e-63!86;UBERON:0002346!3.94e-60!90;UBERON:0000956!5.53e-56!25;UBERON:0000203!5.53e-56!25;UBERON:0003056!8.61e-52!61;UBERON:0000033!6.27e-48!123;UBERON:0002619!1.62e-46!22;UBERON:0001950!7.62e-46!20;UBERON:0000153!3.42e-45!129;UBERON:0007811!3.42e-45!129;UBERON:0004121!2.33e-44!169;UBERON:0000924!4.62e-43!173;UBERON:0006601!4.62e-43!173;UBERON:0007023!1.70e-42!115;UBERON:0002420!6.04e-22!9;UBERON:0007245!6.04e-22!9;UBERON:0010009!6.04e-22!9;UBERON:0010011!6.04e-22!9;UBERON:0000454!6.04e-22!9;UBERON:0002308!2.16e-21!9;UBERON:0000125!2.16e-21!9;UBERON:0000025!9.68e-21!194;UBERON:0001871!2.31e-19!7;UBERON:0003076!6.17e-18!15;UBERON:0003057!6.17e-18!15;UBERON:0009663!3.30e-16!7;UBERON:0002021!4.96e-16!5;UBERON:0004111!1.46e-15!241;UBERON:0004733!9.45e-15!12;UBERON:0002028!9.45e-15!12;UBERON:0007277!9.45e-15!12;UBERON:0000064!3.79e-14!219;UBERON:0000369!1.14e-13!4;UBERON:0002435!1.14e-13!4;UBERON:0000204!1.14e-13!4;UBERON:0010082!1.14e-13!4;UBERON:0000200!1.57e-13!6;UBERON:0004732!1.63e-13!13;UBERON:0000477!2.58e-12!286;UBERON:0002680!1.66e-11!9;UBERON:0001895!1.66e-11!9;UBERON:0010092!1.66e-11!9;UBERON:0000475!2.05e-11!365;UBERON:0000483!2.36e-11!309;UBERON:0000119!3.86e-11!312;UBERON:0000349!5.28e-11!5;UBERON:0001872!1.25e-10!5;UBERON:0005383!1.54e-10!3;UBERON:0005382!1.54e-10!3;UBERON:0002771!2.25e-10!3;UBERON:0000988!1.25e-09!3;UBERON:0002298!3.54e-09!8;UBERON:0001876!1.51e-07!2;UBERON:0001873!1.96e-07!2;UBERON:0010122!1.96e-07!2;UBERON:0000922!2.66e-07!612;UBERON:0001875!4.60e-07!2;UBERON:0006514!4.60e-07!2;UBERON:0002148!6.46e-07!2;UBERON:0009662!6.46e-07!2;UBERON:0000467!6.79e-07!625;UBERON:0000480!7.33e-07!626;UBERON:0000062!8.64e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!1.65e-91!57;UBERON:0005068!1.65e-91!57;UBERON:0006241!1.65e-91!57;UBERON:0007135!1.65e-91!57;UBERON:0001017!7.68e-89!82;UBERON:0005743!8.87e-88!86;UBERON:0000073!4.33e-85!94;UBERON:0001016!4.33e-85!94;UBERON:0002616!7.89e-80!59;UBERON:0000955!1.92e-77!69;UBERON:0006238!1.92e-77!69;UBERON:0001893!6.79e-77!34;UBERON:0001869!1.26e-76!32;UBERON:0002020!1.74e-76!34;UBERON:0003528!1.74e-76!34;UBERON:0002780!3.89e-76!41;UBERON:0001890!3.89e-76!41;UBERON:0006240!3.89e-76!41;UBERON:0003080!3.73e-74!42;UBERON:0002791!7.82e-74!33;UBERON:0003075!2.04e-63!86;UBERON:0007284!2.04e-63!86;UBERON:0002346!3.94e-60!90;UBERON:0000956!5.53e-56!25;UBERON:0000203!5.53e-56!25;UBERON:0003056!8.61e-52!61;UBERON:0000033!6.27e-48!123;UBERON:0002619!1.62e-46!22;UBERON:0001950!7.62e-46!20;UBERON:0000153!3.42e-45!129;UBERON:0007811!3.42e-45!129;UBERON:0004121!2.33e-44!169;UBERON:0000924!4.62e-43!173;UBERON:0006601!4.62e-43!173;UBERON:0007023!1.70e-42!115;UBERON:0002420!6.04e-22!9;UBERON:0007245!6.04e-22!9;UBERON:0010009!6.04e-22!9;UBERON:0010011!6.04e-22!9;UBERON:0000454!6.04e-22!9;UBERON:0002308!2.16e-21!9;UBERON:0000125!2.16e-21!9;UBERON:0000025!9.68e-21!194;UBERON:0001871!2.31e-19!7;UBERON:0003076!6.17e-18!15;UBERON:0003057!6.17e-18!15;UBERON:0009663!3.30e-16!7;UBERON:0002021!4.96e-16!5;UBERON:0004111!1.46e-15!241;UBERON:0004733!9.45e-15!12;UBERON:0002028!9.45e-15!12;UBERON:0007277!9.45e-15!12;UBERON:0000064!3.79e-14!219;UBERON:0000369!1.14e-13!4;UBERON:0002435!1.14e-13!4;UBERON:0000204!1.14e-13!4;UBERON:0010082!1.14e-13!4;UBERON:0000200!1.57e-13!6;UBERON:0004732!1.63e-13!13;UBERON:0000477!2.58e-12!286;UBERON:0002680!1.66e-11!9;UBERON:0001895!1.66e-11!9;UBERON:0010092!1.66e-11!9;UBERON:0000475!2.05e-11!365;UBERON:0000483!2.36e-11!309;UBERON:0000119!3.86e-11!312;UBERON:0000349!5.28e-11!5;UBERON:0001872!1.25e-10!5;UBERON:0005383!1.54e-10!3;UBERON:0005382!1.54e-10!3;UBERON:0002771!2.25e-10!3;UBERON:0000988!1.25e-09!3;UBERON:0002298!3.54e-09!8;UBERON:0001876!1.51e-07!2;UBERON:0001873!1.96e-07!2;UBERON:0010122!1.96e-07!2;UBERON:0000922!2.66e-07!612;UBERON:0001875!4.60e-07!2;UBERON:0006514!4.60e-07!2;UBERON:0002148!6.46e-07!2;UBERON:0009662!6.46e-07!2;UBERON:0000467!6.79e-07!625;UBERON:0000480!7.33e-07!626;UBERON:0000062!8.64e-07!511 | ||
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|short_description=p@chr3:13083919..13083940,- | |short_description=p@chr3:13083919..13083940,- | ||
}} | }} |
Latest revision as of 15:50, 29 July 2015
Short description: | p@chr3:13083919..13083940, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13083919..13083940, - |
Coexpression cluster: | C1198_Neural_parietal_occipital_Astrocyte_brain_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.52e-17 | 3 |
neuronal stem cell | 7.85e-11 | 8 |
neural cell | 8.19e-09 | 25 |
oligodendrocyte | 1.59e-07 | 7 |
macroglial cell | 1.59e-07 | 7 |
astrocyte | 1.59e-07 | 7 |
oligodendrocyte precursor cell | 1.59e-07 | 7 |