FFCP PHASE1:Hg19::chr4:57775059..57775139,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5978 | |EntrezGene=5978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9966 | |HGNC=9966 | ||
|TSSclassifier=strong | |||
|UniProt=Q13127 | |UniProt=Q13127 | ||
|association_with_transcript=0bp_to_ENST00000511065,NM_001193508,uc003hci.2_5end | |association_with_transcript=0bp_to_ENST00000511065,NM_001193508,uc003hci.2_5end | ||
|cluster_id=chr4:57775059..57775139,+ | |||
|description=CAGE_peak_2_at_REST_5end | |description=CAGE_peak_2_at_REST_5end | ||
|id=chr4:57775059..57775139,+ | |id=chr4:57775059..57775139,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.78e-27!172;CL:0000566!5.78e-27!172;CL:0000988!6.16e-25!182;CL:0002032!1.93e-24!165;CL:0000837!1.93e-24!165;CL:0000738!9.29e-21!140;CL:0002031!2.67e-20!124;CL:0002087!6.86e-20!119;CL:0000838!1.92e-13!52;CL:0000542!1.07e-12!53;CL:0000051!1.07e-12!53;CL:0000763!3.35e-12!112;CL:0000049!3.35e-12!112;CL:0000134!2.21e-11!358;CL:0000791!5.25e-11!18;CL:0000789!5.25e-11!18;CL:0002420!5.25e-11!18;CL:0002419!5.25e-11!18;CL:0000790!5.25e-11!18;CL:0002320!7.13e-11!365;CL:0000084!2.49e-09!25;CL:0000827!2.49e-09!25;CL:0000625!2.85e-08!11;CL:0000048!5.20e-08!430;CL:0000557!5.75e-08!71;CL:0000839!6.10e-08!70;CL:0000219!9.93e-08!390;CL:0002009!2.52e-07!65;CL:0000723!3.39e-07!436;CL:0002194!4.26e-07!63;CL:0000576!4.26e-07!63;CL:0000040!4.26e-07!63;CL:0000559!4.26e-07!63 | |ontology_enrichment_celltype=CL:0000037!5.78e-27!172;CL:0000566!5.78e-27!172;CL:0000988!6.16e-25!182;CL:0002032!1.93e-24!165;CL:0000837!1.93e-24!165;CL:0000738!9.29e-21!140;CL:0002031!2.67e-20!124;CL:0002087!6.86e-20!119;CL:0000838!1.92e-13!52;CL:0000542!1.07e-12!53;CL:0000051!1.07e-12!53;CL:0000763!3.35e-12!112;CL:0000049!3.35e-12!112;CL:0000134!2.21e-11!358;CL:0000791!5.25e-11!18;CL:0000789!5.25e-11!18;CL:0002420!5.25e-11!18;CL:0002419!5.25e-11!18;CL:0000790!5.25e-11!18;CL:0002320!7.13e-11!365;CL:0000084!2.49e-09!25;CL:0000827!2.49e-09!25;CL:0000625!2.85e-08!11;CL:0000048!5.20e-08!430;CL:0000557!5.75e-08!71;CL:0000839!6.10e-08!70;CL:0000219!9.93e-08!390;CL:0002009!2.52e-07!65;CL:0000723!3.39e-07!436;CL:0002194!4.26e-07!63;CL:0000576!4.26e-07!63;CL:0000040!4.26e-07!63;CL:0000559!4.26e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.95e-11;18!CL:0000789;3.95e-11;18!CL:0002419;3.95e-11;18!CL:0000084;1.78e-09;25!CL:0000625;1.94e-08;11!CL:0000542;6.80e-08;53 | |ontology_enrichment_celltype_v019=CL:0000791;3.95e-11;18!CL:0000789;3.95e-11;18!CL:0002419;3.95e-11;18!CL:0000084;1.78e-09;25!CL:0000625;1.94e-08;11!CL:0000542;6.80e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.03e-27,168;CL:0000988,9.23e-26,177;CL:0002032,1.42e-24,161;CL:0000837,1.42e-24,161;CL:0000738,6.88e-21,136;CL:0002031,2.41e-20,120;CL:0002087,7.08e-20,115;CL:0000838,1.91e-13,52;CL:0000542,1.27e-12,53;CL:0000051,1.27e-12,53;CL:0000763,2.43e-12,108;CL:0000049,2.43e-12,108;CL:0000134,1.37e-11,354;CL:0002320,4.21e-11,361;CL:0000791,4.41e-11,18;CL:0000789,4.41e-11,18;CL:0002420,4.41e-11,18;CL:0002419,4.41e-11,18;CL:0000790,4.41e-11,18;CL:0000084,2.78e-09,25;CL:0000827,2.78e-09,25;CL:0000625,2.51e-08,11;CL:0000219,4.80e-08,386;CL:0000557,6.02e-08,67;CL:0000048,6.28e-08,427;CL:0000839,6.36e-08,66;CL:0002009,2.66e-07,61;CL:0000723,3.83e-07,433;CL:0002194,4.52e-07,59;CL:0000576,4.52e-07,59;CL:0000040,4.52e-07,59;CL:0000559,4.52e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;3.95e-11;18!CL:0000051;6.80e-08;53 | |ontology_enrichment_development_v019=CL:0000790;3.95e-11;18!CL:0000051;6.80e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-12!102;UBERON:0003061!1.05e-12!102;UBERON:0002384!8.95e-11!375;UBERON:0002193!1.29e-09!112;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15;UBERON:0001474!5.74e-07!86;UBERON:0002371!7.09e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!1.05e-12!102;UBERON:0003061!1.05e-12!102;UBERON:0002384!8.95e-11!375;UBERON:0002193!1.29e-09!112;UBERON:0000178!1.97e-07!15;UBERON:0000179!1.97e-07!15;UBERON:0000463!1.97e-07!15;UBERON:0001474!5.74e-07!86;UBERON:0002371!7.09e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.65e-07;15!UBERON:0000179;2.65e-07;15!UBERON:0000463;2.65e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.65e-07;15!UBERON:0000179;2.65e-07;15!UBERON:0000463;2.65e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.47e-12,98;UBERON:0003061,1.47e-12,98;UBERON:0002384,6.00e-11,371;UBERON:0002193,1.96e-09,108;UBERON:0000178,1.76e-07,15;UBERON:0000179,1.76e-07,15;UBERON:0000463,1.76e-07,15;UBERON:0001474,9.04e-07,82 | |||
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| ||
|short_description=p2@REST | |short_description=p2@REST | ||
}} | }} |
Latest revision as of 03:15, 18 September 2015
Short description: | p2@REST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_REST_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511065, NM_001193508, uc003hci.2_5end |
EntrezGene: | REST |
HGNC: | 9966 |
UniProt: | Q13127 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.47e-12 | 98 |
blood island | 1.47e-12 | 98 |
connective tissue | 6.00e-11 | 371 |
hemolymphoid system | 1.96e-09 | 108 |
blood | 1.76e-07 | 15 |
haemolymphatic fluid | 1.76e-07 | 15 |
organism substance | 1.76e-07 | 15 |
bone element | 9.04e-07 | 82 |