FFCP PHASE1:Hg19::chr1:222791157..222791168,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:222791157..222791168,+
|short_description=p10@MIA3
|description=CAGE_peak_10_at_MIA3_5end
|association_with_transcript=-259bp_to_ENST00000344922_5end
|Ent...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=375056 | |EntrezGene=375056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24008 | |HGNC=24008 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JRA6 | |UniProt=Q5JRA6 | ||
|association_with_transcript=-259bp_to_ENST00000344922_5end | |||
|cluster_id=chr1:222791157..222791168,+ | |||
|coexpression_cluster_id=C1049 | |||
|description=CAGE_peak_10_at_MIA3_5end | |||
|id=chr1:222791157..222791168,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.96e-75!57;UBERON:0005068!3.96e-75!57;UBERON:0006241!3.96e-75!57;UBERON:0007135!3.96e-75!57;UBERON:0002616!2.73e-72!59;UBERON:0002780!2.09e-71!41;UBERON:0001890!2.09e-71!41;UBERON:0006240!2.09e-71!41;UBERON:0002020!2.00e-70!34;UBERON:0003528!2.00e-70!34;UBERON:0001869!4.96e-70!32;UBERON:0003080!1.52e-69!42;UBERON:0000955!1.96e-66!69;UBERON:0006238!1.96e-66!69;UBERON:0001893!1.36e-65!34;UBERON:0002791!1.52e-62!33;UBERON:0001017!1.24e-57!82;UBERON:0002619!9.72e-56!22;UBERON:0005743!1.57e-54!86;UBERON:0003075!3.12e-52!86;UBERON:0007284!3.12e-52!86;UBERON:0000073!5.29e-51!94;UBERON:0001016!5.29e-51!94;UBERON:0002346!1.76e-49!90;UBERON:0001950!3.07e-49!20;UBERON:0000956!1.17e-48!25;UBERON:0000203!1.17e-48!25;UBERON:0003056!1.33e-48!61;UBERON:0007023!3.27e-46!115;UBERON:0000033!3.65e-37!123;UBERON:0000153!5.66e-35!129;UBERON:0007811!5.66e-35!129;UBERON:0004121!5.42e-27!169;UBERON:0000924!3.94e-26!173;UBERON:0006601!3.94e-26!173;UBERON:0002420!1.24e-23!9;UBERON:0007245!1.24e-23!9;UBERON:0010009!1.24e-23!9;UBERON:0010011!1.24e-23!9;UBERON:0000454!1.24e-23!9;UBERON:0002308!6.00e-23!9;UBERON:0000125!6.00e-23!9;UBERON:0000200!1.24e-20!6;UBERON:0000349!7.59e-18!5;UBERON:0000025!1.10e-17!194;UBERON:0009663!2.77e-17!7;UBERON:0002021!4.48e-17!5;UBERON:0001871!1.55e-15!7;UBERON:0000369!2.44e-14!4;UBERON:0002435!2.44e-14!4;UBERON:0000204!2.44e-14!4;UBERON:0010082!2.44e-14!4;UBERON:0004111!3.80e-14!241;UBERON:0000477!6.60e-12!286;UBERON:0004733!9.92e-12!12;UBERON:0002028!9.92e-12!12;UBERON:0007277!9.92e-12!12;UBERON:0000475!9.93e-12!365;UBERON:0000064!1.48e-11!219;UBERON:0002771!1.99e-11!3;UBERON:0001872!2.97e-11!5;UBERON:0005383!3.00e-11!3;UBERON:0005382!3.00e-11!3;UBERON:0004732!9.41e-11!13;UBERON:0000988!3.22e-10!3;UBERON:0000483!1.49e-09!309;UBERON:0002298!1.55e-09!8;UBERON:0000119!2.30e-09!312;UBERON:0003076!3.44e-09!15;UBERON:0003057!3.44e-09!15;UBERON:0002680!1.55e-08!9;UBERON:0001895!1.55e-08!9;UBERON:0010092!1.55e-08!9;UBERON:0001954!2.99e-08!2;UBERON:0003022!2.99e-08!2;UBERON:0002421!2.99e-08!2;UBERON:0002600!2.99e-08!2;UBERON:0001876!3.31e-08!2;UBERON:0001870!3.80e-08!2;UBERON:0001873!7.02e-08!2;UBERON:0010122!7.02e-08!2;UBERON:0001894!7.66e-08!7;UBERON:0006222!7.66e-08!7;UBERON:0000062!9.40e-08!511;UBERON:0001875!1.16e-07!2;UBERON:0006514!1.16e-07!2;UBERON:0002148!2.03e-07!2;UBERON:0009662!2.03e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.71e-104;32!UBERON:0002791;4.46e-98;32!UBERON:0002619;6.87e-98;22!UBERON:0001893;8.87e-96;34!UBERON:0003528;1.02e-89;34!UBERON:0002020;1.02e-89;34!UBERON:0000956;2.50e-86;25!UBERON:0000203;2.50e-86;25!UBERON:0001950;7.13e-82;20!UBERON:0002780;3.99e-72;41!UBERON:0001890;3.99e-72;41!UBERON:0000349;2.99e-45;5!UBERON:0000073;2.65e-41;53!UBERON:0002616;2.65e-41;53!UBERON:0000200;6.60e-38;6!UBERON:0002420;9.05e-36;9!UBERON:0007245;9.05e-36;9!UBERON:0010009;9.05e-36;9!UBERON:0010011;9.05e-36;9!UBERON:0000454;9.05e-36;9!UBERON:0001871;1.68e-32;6!UBERON:0001870;1.03e-27;3!UBERON:0000955;1.80e-27;68!UBERON:0001017;4.19e-23;75!UBERON:0000369;4.45e-21;4!UBERON:0002435;4.45e-21;4!UBERON:0000204;4.45e-21;4!UBERON:0009663;6.17e-21;7!UBERON:0002771;1.36e-19;2!UBERON:0001954;2.26e-19;2!UBERON:0003022;2.26e-19;2!UBERON:0002421;2.26e-19;2!UBERON:0002600;2.26e-19;2!UBERON:0001876;3.28e-19;2!UBERON:0002702;3.28e-19;2!UBERON:0001872;6.77e-17;5!UBERON:0002021;6.77e-17;5!UBERON:0000125;2.40e-16;9!UBERON:0002308;2.40e-16;9!UBERON:0001016;4.17e-15;83!UBERON:0005383;3.06e-13;3!UBERON:0005382;3.06e-13;3!UBERON:0007023;1.21e-11;114!UBERON:0001874;7.76e-11;1!UBERON:0001882;2.74e-10;1!UBERON:0007190;2.74e-10;1!UBERON:0005403;2.74e-10;1!UBERON:0011216;6.41e-08;132!UBERON:0010314;3.83e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.11e-117,32;UBERON:0001893,1.53e-110,34;UBERON:0002791,2.02e-106,32;UBERON:0002780,4.25e-101,41;UBERON:0001890,4.25e-101,41;UBERON:0003080,4.25e-101,41;UBERON:0006240,4.25e-101,41;UBERON:0003528,3.44e-100,34;UBERON:0002020,3.44e-100,34;UBERON:0002619,6.72e-98,22;UBERON:0000956,2.45e-86,25;UBERON:0000203,2.45e-86,25;UBERON:0001950,8.64e-82,20;UBERON:0000073,4.93e-78,53;UBERON:0002616,4.93e-78,53;UBERON:0001049,8.79e-74,56;UBERON:0005068,8.79e-74,56;UBERON:0006241,8.79e-74,56;UBERON:0007135,8.79e-74,56;UBERON:0003056,1.31e-67,61;UBERON:0000955,1.44e-59,68;UBERON:0006238,1.44e-59,68;UBERON:0001017,8.50e-50,81;UBERON:0003075,8.50e-50,82;UBERON:0007284,8.50e-50,82;UBERON:0002346,2.24e-47,86;UBERON:0000349,2.08e-45,5;UBERON:0001016,1.20e-44,89;UBERON:0010371,9.19e-39,104;UBERON:0000200,8.66e-38,6;UBERON:0002420,6.31e-36,9;UBERON:0007245,6.31e-36,9;UBERON:0010009,6.31e-36,9;UBERON:0010011,6.31e-36,9;UBERON:0000454,6.31e-36,9;UBERON:0001871,1.86e-32,6;UBERON:0007023,4.10e-32,114;UBERON:0010314,5.50e-30,132;UBERON:0001870,1.08e-27,3;UBERON:0004121,3.26e-22,171;UBERON:0000924,3.26e-22,171;UBERON:0006601,3.26e-22,171;UBERON:0000369,4.62e-21,4;UBERON:0002435,4.62e-21,4;UBERON:0000204,4.62e-21,4;UBERON:0010082,4.62e-21,4;UBERON:0009663,5.72e-21,7;UBERON:0000025,1.00e-19,192;UBERON:0002771,1.36e-19,2;UBERON:0001954,1.64e-19,2;UBERON:0003022,1.64e-19,2;UBERON:0002421,1.64e-19,2;UBERON:0002600,1.64e-19,2;UBERON:0001876,2.17e-19,2;UBERON:0002702,3.77e-19,2;UBERON:0002021,5.60e-17,5;UBERON:0001872,8.66e-17,5;UBERON:0000125,2.26e-16,9;UBERON:0002308,2.26e-16,9;UBERON:0011216,2.64e-16,223;UBERON:0004111,3.56e-15,240;UBERON:0005383,2.47e-13,3;UBERON:0005382,2.47e-13,3;UBERON:0000483,3.19e-11,306;UBERON:0000119,4.40e-11,309;UBERON:0001874,7.40e-11,1;UBERON:0007190,3.29e-10,1;UBERON:0001882,3.96e-10,1;UBERON:0005403,3.96e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.927680981618513,0,0,0.262379999988587,0,0,0,0,0,0,0,0.885741385813839,1.80894657938112,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,3.18091875923721,1.90684768556206,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.19647276823534,1.502291168478,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,2.8339315265117,1.91560630868582,1.43581454968528,0.252071696221718,0.899044282034833,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,1.56215619722769,2.68692835451539,1.14148458349032,0,0,0,0,0,5.35701835878287,0,0,0.227662191351298,0,0,0,0.271878931907327,0.328863867814245,0,0,0,3.92788974790005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.927680981618513,0,0,0.262379999988587,0,0,0,0,0,0,0,0.885741385813839,1.80894657938112,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,3.18091875923721,1.90684768556206,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.19647276823534,1.502291168478,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28458450192919,2.8339315265117,1.91560630868582,1.43581454968528,0.252071696221718,0.899044282034833,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,1.56215619722769,2.68692835451539,1.14148458349032,0,0,0,0,0,5.35701835878287,0,0,0.227662191351298,0,0,0,0.271878931907327,0.328863867814245,0,0,0,3.92788974790005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | ||
|short_description=p10@MIA3 | |||
}} | }} |
Latest revision as of 20:09, 15 September 2015
Short description: | p10@MIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MIA3_5end |
Coexpression cluster: | C1049_pineal_medial_hippocampus_middle_occipital_amygdala_parietal |
Association with transcript: | -259bp_to_ENST00000344922_5end |
EntrezGene: | MIA3 |
HGNC: | 24008 |
UniProt: | Q5JRA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data