FFCP PHASE1:Hg19::chr4:164534145..164534178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55016 | |EntrezGene=55016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26077 | |HGNC=26077 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_ENST00000512214_5end | |association_with_transcript=-88bp_to_ENST00000512214_5end | ||
|cluster_id=chr4:164534145..164534178,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_4_at_MARCH1_5end | |description=CAGE_peak_4_at_MARCH1_5end | ||
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|ontology_enrichment_celltype=CL:0002087!2.79e-26!119;CL:0000738!1.33e-23!140;CL:0002031!4.10e-22!124;CL:0002009!1.14e-21!65;CL:0002194!2.19e-21!63;CL:0000576!2.19e-21!63;CL:0000040!2.19e-21!63;CL:0000559!2.19e-21!63;CL:0000557!3.62e-20!71;CL:0000839!4.43e-18!70;CL:0000766!5.96e-17!76;CL:0000037!1.55e-16!172;CL:0000566!1.55e-16!172;CL:0000236!2.73e-15!14;CL:0000988!1.28e-14!182;CL:0002057!2.57e-14!42;CL:0002032!5.64e-14!165;CL:0000837!5.64e-14!165;CL:0000860!7.43e-13!45;CL:0000945!1.31e-11!24;CL:0000826!1.31e-11!24;CL:0000763!2.26e-09!112;CL:0000049!2.26e-09!112;CL:0002393!1.72e-08!9;CL:0002397!1.72e-08!9 | |ontology_enrichment_celltype=CL:0002087!2.79e-26!119;CL:0000738!1.33e-23!140;CL:0002031!4.10e-22!124;CL:0002009!1.14e-21!65;CL:0002194!2.19e-21!63;CL:0000576!2.19e-21!63;CL:0000040!2.19e-21!63;CL:0000559!2.19e-21!63;CL:0000557!3.62e-20!71;CL:0000839!4.43e-18!70;CL:0000766!5.96e-17!76;CL:0000037!1.55e-16!172;CL:0000566!1.55e-16!172;CL:0000236!2.73e-15!14;CL:0000988!1.28e-14!182;CL:0002057!2.57e-14!42;CL:0002032!5.64e-14!165;CL:0000837!5.64e-14!165;CL:0000860!7.43e-13!45;CL:0000945!1.31e-11!24;CL:0000826!1.31e-11!24;CL:0000763!2.26e-09!112;CL:0000049!2.26e-09!112;CL:0002393!1.72e-08!9;CL:0002397!1.72e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.44e-33;13!CL:0000945;4.11e-20;24!CL:0000235;4.25e-15;6!CL:0002619;6.01e-12;3!CL:0000576;5.86e-09;48!CL:0000473;1.81e-08;39!CL:0000234;1.81e-08;39!CL:0000738;4.47e-08;136 | |ontology_enrichment_celltype_v019=CL:0000236;2.44e-33;13!CL:0000945;4.11e-20;24!CL:0000235;4.25e-15;6!CL:0002619;6.01e-12;3!CL:0000576;5.86e-09;48!CL:0000473;1.81e-08;39!CL:0000234;1.81e-08;39!CL:0000738;4.47e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.83e-31,14;CL:0002087,1.90e-29,115;CL:0002031,4.80e-26,120;CL:0000738,3.43e-25,136;CL:0002194,1.05e-22,59;CL:0000576,1.05e-22,59;CL:0000040,1.05e-22,59;CL:0000559,1.05e-22,59;CL:0002009,8.59e-22,61;CL:0000557,2.45e-21,67;CL:0000945,3.08e-20,24;CL:0000826,3.08e-20,24;CL:0000037,5.04e-20,168;CL:0002032,6.99e-20,161;CL:0000837,6.99e-20,161;CL:0000839,9.50e-20,66;CL:0000766,1.69e-19,72;CL:0000988,1.49e-18,177;CL:0000235,6.53e-15,6;CL:0000473,2.24e-14,48;CL:0000234,2.24e-14,48;CL:0000763,2.27e-12,108;CL:0000049,2.27e-12,108;CL:0002619,6.03e-12,3;CL:0000838,7.30e-08,52;CL:0000542,1.15e-07,53;CL:0000051,1.15e-07,53;CL:0000860,2.05e-07,42;CL:0002057,2.05e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-44!115;UBERON:0002390!3.06e-28!102;UBERON:0003061!3.06e-28!102;UBERON:0002193!8.29e-27!112;UBERON:0002371!1.55e-16!80;UBERON:0002405!3.54e-15!115;UBERON:0001474!1.46e-14!86;UBERON:0000178!9.14e-13!15;UBERON:0000179!9.14e-13!15;UBERON:0000463!9.14e-13!15;UBERON:0004765!3.69e-12!101;UBERON:0001434!3.69e-12!101;UBERON:0002780!6.02e-10!41;UBERON:0001890!6.02e-10!41;UBERON:0006240!6.02e-10!41;UBERON:0003081!6.28e-10!216;UBERON:0001049!9.90e-10!57;UBERON:0005068!9.90e-10!57;UBERON:0006241!9.90e-10!57;UBERON:0007135!9.90e-10!57;UBERON:0003080!1.42e-09!42;UBERON:0002420!2.80e-08!9;UBERON:0007245!2.80e-08!9;UBERON:0010009!2.80e-08!9;UBERON:0010011!2.80e-08!9;UBERON:0000454!2.80e-08!9;UBERON:0002616!3.25e-08!59;UBERON:0001893!4.72e-07!34;UBERON:0003075!5.92e-07!86;UBERON:0007284!5.92e-07!86;UBERON:0001017!6.04e-07!82;UBERON:0005743!7.45e-07!86;UBERON:0000479!8.72e-07!787 | |ontology_enrichment_uberon=UBERON:0007023!4.43e-44!115;UBERON:0002390!3.06e-28!102;UBERON:0003061!3.06e-28!102;UBERON:0002193!8.29e-27!112;UBERON:0002371!1.55e-16!80;UBERON:0002405!3.54e-15!115;UBERON:0001474!1.46e-14!86;UBERON:0000178!9.14e-13!15;UBERON:0000179!9.14e-13!15;UBERON:0000463!9.14e-13!15;UBERON:0004765!3.69e-12!101;UBERON:0001434!3.69e-12!101;UBERON:0002780!6.02e-10!41;UBERON:0001890!6.02e-10!41;UBERON:0006240!6.02e-10!41;UBERON:0003081!6.28e-10!216;UBERON:0001049!9.90e-10!57;UBERON:0005068!9.90e-10!57;UBERON:0006241!9.90e-10!57;UBERON:0007135!9.90e-10!57;UBERON:0003080!1.42e-09!42;UBERON:0002420!2.80e-08!9;UBERON:0007245!2.80e-08!9;UBERON:0010009!2.80e-08!9;UBERON:0010011!2.80e-08!9;UBERON:0000454!2.80e-08!9;UBERON:0002616!3.25e-08!59;UBERON:0001893!4.72e-07!34;UBERON:0003075!5.92e-07!86;UBERON:0007284!5.92e-07!86;UBERON:0001017!6.04e-07!82;UBERON:0005743!7.45e-07!86;UBERON:0000479!8.72e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-21;15!UBERON:0000179;4.66e-21;15!UBERON:0000463;4.66e-21;15!UBERON:0002390;1.86e-14;32!UBERON:0002193;6.62e-11;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-21;15!UBERON:0000179;4.66e-21;15!UBERON:0000463;4.66e-21;15!UBERON:0002390;1.86e-14;32!UBERON:0002193;6.62e-11;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.32e-35,108;UBERON:0002390,1.61e-34,98;UBERON:0003061,1.61e-34,98;UBERON:0000178,3.59e-21,15;UBERON:0000179,3.59e-21,15;UBERON:0000463,3.59e-21,15;UBERON:0002405,2.78e-20,93;UBERON:0002371,3.66e-18,76;UBERON:0001474,1.96e-16,82;UBERON:0003081,2.11e-15,203;UBERON:0004765,1.72e-14,90;UBERON:0001434,1.68e-12,100;UBERON:0000926,1.61e-07,315;UBERON:0004120,1.61e-07,315;UBERON:0006603,1.61e-07,315 | |||
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| ||
|short_description=p4@MARCH1 | |short_description=p4@MARCH1 | ||
}} | }} |
Latest revision as of 13:33, 16 September 2015
Short description: | p4@MARCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MARCH1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -88bp_to_ENST00000512214_5end |
EntrezGene: | MARCH1 |
HGNC: | 26077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.83e-31 | 14 |
nongranular leukocyte | 1.90e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 4.80e-26 | 120 |
leukocyte | 3.43e-25 | 136 |
monopoietic cell | 1.05e-22 | 59 |
monocyte | 1.05e-22 | 59 |
monoblast | 1.05e-22 | 59 |
promonocyte | 1.05e-22 | 59 |
macrophage dendritic cell progenitor | 8.59e-22 | 61 |
granulocyte monocyte progenitor cell | 2.45e-21 | 67 |
lymphocyte of B lineage | 3.08e-20 | 24 |
pro-B cell | 3.08e-20 | 24 |
hematopoietic stem cell | 5.04e-20 | 168 |
hematopoietic oligopotent progenitor cell | 6.99e-20 | 161 |
hematopoietic multipotent progenitor cell | 6.99e-20 | 161 |
myeloid lineage restricted progenitor cell | 9.50e-20 | 66 |
myeloid leukocyte | 1.69e-19 | 72 |
hematopoietic cell | 1.49e-18 | 177 |
macrophage | 6.53e-15 | 6 |
defensive cell | 2.24e-14 | 48 |
phagocyte | 2.24e-14 | 48 |
myeloid cell | 2.27e-12 | 108 |
common myeloid progenitor | 2.27e-12 | 108 |
adult endothelial progenitor cell | 6.03e-12 | 3 |
lymphoid lineage restricted progenitor cell | 7.30e-08 | 52 |
lymphocyte | 1.15e-07 | 53 |
common lymphoid progenitor | 1.15e-07 | 53 |
classical monocyte | 2.05e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.05e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.32e-35 | 108 |
hematopoietic system | 1.61e-34 | 98 |
blood island | 1.61e-34 | 98 |
blood | 3.59e-21 | 15 |
haemolymphatic fluid | 3.59e-21 | 15 |
organism substance | 3.59e-21 | 15 |
immune system | 2.78e-20 | 93 |
bone marrow | 3.66e-18 | 76 |
bone element | 1.96e-16 | 82 |
lateral plate mesoderm | 2.11e-15 | 203 |
skeletal element | 1.72e-14 | 90 |
skeletal system | 1.68e-12 | 100 |
mesoderm | 1.61e-07 | 315 |
mesoderm-derived structure | 1.61e-07 | 315 |
presumptive mesoderm | 1.61e-07 | 315 |