FFCP PHASE1:Hg19::chr9:130027223..130027236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84253 | |EntrezGene=84253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25425 | |HGNC=25425 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=362bp_to_ENST00000485331_5end | |association_with_transcript=362bp_to_ENST00000485331_5end | ||
|cluster_id=chr9:130027223..130027236,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_14_at_GARNL3_5end | |description=CAGE_peak_14_at_GARNL3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.50e-25;3!UBERON:0006601;1.91e-08;82 | |ontology_enrichment_development_v019=UBERON:0006215;1.50e-25;3!UBERON:0006601;1.91e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.17e-63!57;UBERON:0005068!9.17e-63!57;UBERON:0006241!9.17e-63!57;UBERON:0007135!9.17e-63!57;UBERON:0002616!1.02e-56!59;UBERON:0001017!3.31e-55!82;UBERON:0000073!6.71e-55!94;UBERON:0001016!6.71e-55!94;UBERON:0001893!4.24e-53!34;UBERON:0002020!4.67e-53!34;UBERON:0003528!4.67e-53!34;UBERON:0005743!2.98e-52!86;UBERON:0001869!3.22e-52!32;UBERON:0002791!6.33e-50!33;UBERON:0000955!8.60e-50!69;UBERON:0006238!8.60e-50!69;UBERON:0002619!3.69e-47!22;UBERON:0002780!5.96e-47!41;UBERON:0001890!5.96e-47!41;UBERON:0006240!5.96e-47!41;UBERON:0001950!2.10e-46!20;UBERON:0003080!1.06e-45!42;UBERON:0003075!2.01e-41!86;UBERON:0007284!2.01e-41!86;UBERON:0000956!3.69e-41!25;UBERON:0000203!3.69e-41!25;UBERON:0002346!3.32e-39!90;UBERON:0007023!4.59e-37!115;UBERON:0003056!1.22e-29!61;UBERON:0000033!5.23e-28!123;UBERON:0004121!5.25e-28!169;UBERON:0000924!3.91e-27!173;UBERON:0006601!3.91e-27!173;UBERON:0000153!2.62e-26!129;UBERON:0007811!2.62e-26!129;UBERON:0000200!4.79e-22!6;UBERON:0004733!9.43e-18!12;UBERON:0002028!9.43e-18!12;UBERON:0007277!9.43e-18!12;UBERON:0003076!1.81e-17!15;UBERON:0003057!1.81e-17!15;UBERON:0004732!2.81e-16!13;UBERON:0000025!1.11e-15!194;UBERON:0001871!1.13e-15!7;UBERON:0002680!4.85e-14!9;UBERON:0001895!4.85e-14!9;UBERON:0010092!4.85e-14!9;UBERON:0004111!1.34e-13!241;UBERON:0002308!3.84e-13!9;UBERON:0000125!3.84e-13!9;UBERON:0001872!2.65e-12!5;UBERON:0002021!6.01e-12!5;UBERON:0002771!1.16e-11!3;UBERON:0000988!3.01e-11!3;UBERON:0000477!8.06e-11!286;UBERON:0002298!1.27e-10!8;UBERON:0000064!3.19e-10!219;UBERON:0002420!3.73e-09!9;UBERON:0007245!3.73e-09!9;UBERON:0010009!3.73e-09!9;UBERON:0010011!3.73e-09!9;UBERON:0000454!3.73e-09!9;UBERON:0001870!1.92e-08!2;UBERON:0009663!5.95e-08!7;UBERON:0002148!7.14e-08!2;UBERON:0009662!7.14e-08!2;UBERON:0001875!1.24e-07!2;UBERON:0006514!1.24e-07!2;UBERON:0000483!2.82e-07!309;UBERON:0000119!3.99e-07!312;UBERON:0000013!8.48e-07!5;UBERON:0002410!8.48e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!9.17e-63!57;UBERON:0005068!9.17e-63!57;UBERON:0006241!9.17e-63!57;UBERON:0007135!9.17e-63!57;UBERON:0002616!1.02e-56!59;UBERON:0001017!3.31e-55!82;UBERON:0000073!6.71e-55!94;UBERON:0001016!6.71e-55!94;UBERON:0001893!4.24e-53!34;UBERON:0002020!4.67e-53!34;UBERON:0003528!4.67e-53!34;UBERON:0005743!2.98e-52!86;UBERON:0001869!3.22e-52!32;UBERON:0002791!6.33e-50!33;UBERON:0000955!8.60e-50!69;UBERON:0006238!8.60e-50!69;UBERON:0002619!3.69e-47!22;UBERON:0002780!5.96e-47!41;UBERON:0001890!5.96e-47!41;UBERON:0006240!5.96e-47!41;UBERON:0001950!2.10e-46!20;UBERON:0003080!1.06e-45!42;UBERON:0003075!2.01e-41!86;UBERON:0007284!2.01e-41!86;UBERON:0000956!3.69e-41!25;UBERON:0000203!3.69e-41!25;UBERON:0002346!3.32e-39!90;UBERON:0007023!4.59e-37!115;UBERON:0003056!1.22e-29!61;UBERON:0000033!5.23e-28!123;UBERON:0004121!5.25e-28!169;UBERON:0000924!3.91e-27!173;UBERON:0006601!3.91e-27!173;UBERON:0000153!2.62e-26!129;UBERON:0007811!2.62e-26!129;UBERON:0000200!4.79e-22!6;UBERON:0004733!9.43e-18!12;UBERON:0002028!9.43e-18!12;UBERON:0007277!9.43e-18!12;UBERON:0003076!1.81e-17!15;UBERON:0003057!1.81e-17!15;UBERON:0004732!2.81e-16!13;UBERON:0000025!1.11e-15!194;UBERON:0001871!1.13e-15!7;UBERON:0002680!4.85e-14!9;UBERON:0001895!4.85e-14!9;UBERON:0010092!4.85e-14!9;UBERON:0004111!1.34e-13!241;UBERON:0002308!3.84e-13!9;UBERON:0000125!3.84e-13!9;UBERON:0001872!2.65e-12!5;UBERON:0002021!6.01e-12!5;UBERON:0002771!1.16e-11!3;UBERON:0000988!3.01e-11!3;UBERON:0000477!8.06e-11!286;UBERON:0002298!1.27e-10!8;UBERON:0000064!3.19e-10!219;UBERON:0002420!3.73e-09!9;UBERON:0007245!3.73e-09!9;UBERON:0010009!3.73e-09!9;UBERON:0010011!3.73e-09!9;UBERON:0000454!3.73e-09!9;UBERON:0001870!1.92e-08!2;UBERON:0009663!5.95e-08!7;UBERON:0002148!7.14e-08!2;UBERON:0009662!7.14e-08!2;UBERON:0001875!1.24e-07!2;UBERON:0006514!1.24e-07!2;UBERON:0000483!2.82e-07!309;UBERON:0000119!3.99e-07!312;UBERON:0000013!8.48e-07!5;UBERON:0002410!8.48e-07!5 | ||
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|short_description=p14@GARNL3 | |short_description=p14@GARNL3 | ||
}} | }} |
Latest revision as of 03:58, 25 September 2015
Short description: | p14@GARNL3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GARNL3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 362bp_to_ENST00000485331_5end |
EntrezGene: | GARNL3 |
HGNC: | 25425 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data