FFCP PHASE1:Hg19::chr1:33815367..33815399,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:33815367..33815399,-
|short_description=p2@PHC2
|description=CAGE_peak_2_at_PHC2_5end
|association_with_transcript=0bp_to_ENST00000493483_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1912 | |EntrezGene=1912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3183 | |HGNC=3183 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493483_5end | |||
|cluster_id=chr1:33815367..33815399,- | |||
|description=CAGE_peak_2_at_PHC2_5end | |||
|id=chr1:33815367..33815399,- | |||
|ontology_enrichment_celltype=CL:0000220!3.68e-12!246;CL:0000222!4.82e-12!119;CL:0002321!6.12e-12!248;CL:0000115!1.99e-09!35;CL:0002078!1.48e-08!44;CL:0000183!5.12e-08!59;CL:1000449!2.88e-07!16;CL:0002139!5.37e-07!24;CL:1000497!5.60e-07!18;CL:0002518!5.60e-07!18;CL:0000071!6.13e-07!18;CL:0002546!6.13e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.50e-08;36!CL:1000449;2.75e-07;15!CL:1000497;5.29e-07;17!CL:0002518;5.29e-07;17!CL:0002139;5.65e-07;24!CL:0000071;7.44e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.03e-12,121;CL:0002321,2.81e-12,250;CL:0000115,1.10e-09,36;CL:0002078,8.36e-09,45;CL:1000449,3.26e-07,15;CL:0002139,5.36e-07,24;CL:0000071,6.12e-07,18;CL:0002546,6.12e-07,18;CL:1000497,6.73e-07,17;CL:0002518,6.73e-07,17;CL:0000213,9.47e-07,58;CL:0000215,9.47e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;7.44e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002104;3.17e-08;21!UBERON:0000970;1.31e-07;20!UBERON:0006555;2.75e-07;15!UBERON:0004819;2.75e-07;15!UBERON:0001285;2.75e-07;15!UBERON:0007684;2.75e-07;15!UBERON:0000019;3.12e-07;19!UBERON:0000047;3.12e-07;19!UBERON:0004088;3.12e-07;19!UBERON:0010230;3.12e-07;19!UBERON:0000487;3.56e-07;22!UBERON:0000353;3.77e-07;15!UBERON:0001032;4.78e-07;24!UBERON:0004456;4.78e-07;24!UBERON:0004638;7.44e-07;18!UBERON:0001986;7.44e-07;18!UBERON:0004852;7.44e-07;18!UBERON:0003914;7.53e-07;74 | |||
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| ||
|short_description=p2@PHC2 | |||
}} | }} |
Latest revision as of 17:15, 17 September 2015
Short description: | p2@PHC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000493483_5end |
EntrezGene: | PHC2 |
HGNC: | 3183 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.03e-12 | 121 |
embryonic cell | 2.81e-12 | 250 |
endothelial cell | 1.10e-09 | 36 |
meso-epithelial cell | 8.36e-09 | 45 |
epithelial cell of nephron | 3.26e-07 | 15 |
endothelial cell of vascular tree | 5.36e-07 | 24 |
blood vessel endothelial cell | 6.12e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.12e-07 | 18 |
kidney cell | 6.73e-07 | 17 |
kidney epithelial cell | 6.73e-07 | 17 |
lining cell | 9.47e-07 | 58 |
barrier cell | 9.47e-07 | 58 |