FFCP PHASE1:Hg19::chr1:86622421..86622460,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255631 | |EntrezGene=255631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20821 | |HGNC=20821 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RW2,F8WDM8 | |UniProt=Q17RW2,F8WDM8 | ||
|association_with_transcript=0bp_to_ENST00000370571,ENST00000426639,ENST00000485434,uc009wcq.2_5end | |association_with_transcript=0bp_to_ENST00000370571,ENST00000426639,ENST00000485434,uc009wcq.2_5end | ||
|cluster_id=chr1:86622421..86622460,- | |||
|coexpression_cluster_id=C661 | |coexpression_cluster_id=C661 | ||
|description=CAGE_peak_1_at_COL24A1_5end | |description=CAGE_peak_1_at_COL24A1_5end | ||
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|ontology_enrichment_celltype=CL:0000839!4.14e-18!70;CL:0000766!4.98e-18!76;CL:0002057!5.24e-17!42;CL:0000557!5.74e-17!71;CL:0002194!2.15e-15!63;CL:0000576!2.15e-15!63;CL:0000040!2.15e-15!63;CL:0000559!2.15e-15!63;CL:0000860!6.04e-15!45;CL:0002009!2.03e-14!65;CL:0000763!3.07e-13!112;CL:0000049!3.07e-13!112 | |ontology_enrichment_celltype=CL:0000839!4.14e-18!70;CL:0000766!4.98e-18!76;CL:0002057!5.24e-17!42;CL:0000557!5.74e-17!71;CL:0002194!2.15e-15!63;CL:0000576!2.15e-15!63;CL:0000040!2.15e-15!63;CL:0000559!2.15e-15!63;CL:0000860!6.04e-15!45;CL:0002009!2.03e-14!65;CL:0000763!3.07e-13!112;CL:0000049!3.07e-13!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.54e-11;39!CL:0000234;2.54e-11;39!CL:0000860;1.13e-09;33!CL:0002057;1.13e-09;33!CL:0000576;2.71e-08;48!CL:0000766;9.39e-08;69 | |ontology_enrichment_celltype_v019=CL:0000473;2.54e-11;39!CL:0000234;2.54e-11;39!CL:0000860;1.13e-09;33!CL:0002057;1.13e-09;33!CL:0000576;2.71e-08;48!CL:0000766;9.39e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.87e-16,48;CL:0000234,5.87e-16,48;CL:0000839,2.08e-15,66;CL:0000557,2.94e-15,67;CL:0000766,1.17e-14,72;CL:0000763,8.63e-13,108;CL:0000049,8.63e-13,108;CL:0000860,1.23e-12,42;CL:0002057,1.23e-12,42;CL:0002194,1.38e-12,59;CL:0000576,1.38e-12,59;CL:0000040,1.38e-12,59;CL:0000559,1.38e-12,59;CL:0002009,5.74e-12,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-09;42 | |ontology_enrichment_development_v019=CL:0002057;1.31e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.76e-24!32;UBERON:0001893!2.30e-23!34;UBERON:0002020!6.16e-23!34;UBERON:0003528!6.16e-23!34;UBERON:0002791!1.72e-22!33;UBERON:0000956!1.71e-20!25;UBERON:0000203!1.71e-20!25;UBERON:0002780!3.36e-19!41;UBERON:0001890!3.36e-19!41;UBERON:0006240!3.36e-19!41;UBERON:0002619!9.92e-19!22;UBERON:0003080!2.11e-18!42;UBERON:0001049!6.50e-18!57;UBERON:0005068!6.50e-18!57;UBERON:0006241!6.50e-18!57;UBERON:0007135!6.50e-18!57;UBERON:0001474!6.57e-18!86;UBERON:0007023!1.77e-17!115;UBERON:0002371!2.04e-17!80;UBERON:0004765!4.26e-17!101;UBERON:0001434!4.26e-17!101;UBERON:0001950!7.18e-17!20;UBERON:0002390!2.64e-16!102;UBERON:0003061!2.64e-16!102;UBERON:0002616!1.08e-13!59;UBERON:0003056!3.10e-13!61;UBERON:0002193!6.59e-13!112;UBERON:0000955!1.44e-12!69;UBERON:0006238!1.44e-12!69;UBERON:0003075!1.64e-12!86;UBERON:0007284!1.64e-12!86;UBERON:0002204!2.27e-11!167;UBERON:0001017!2.53e-11!82;UBERON:0002346!3.47e-11!90;UBERON:0005743!1.05e-10!86;UBERON:0000073!2.12e-10!94;UBERON:0001016!2.12e-10!94;UBERON:0002405!1.63e-08!115;UBERON:0001871!4.95e-08!7;UBERON:0000153!5.03e-08!129;UBERON:0007811!5.03e-08!129;UBERON:0000062!1.51e-07!511;UBERON:0000033!1.87e-07!123 | |ontology_enrichment_uberon=UBERON:0001869!2.76e-24!32;UBERON:0001893!2.30e-23!34;UBERON:0002020!6.16e-23!34;UBERON:0003528!6.16e-23!34;UBERON:0002791!1.72e-22!33;UBERON:0000956!1.71e-20!25;UBERON:0000203!1.71e-20!25;UBERON:0002780!3.36e-19!41;UBERON:0001890!3.36e-19!41;UBERON:0006240!3.36e-19!41;UBERON:0002619!9.92e-19!22;UBERON:0003080!2.11e-18!42;UBERON:0001049!6.50e-18!57;UBERON:0005068!6.50e-18!57;UBERON:0006241!6.50e-18!57;UBERON:0007135!6.50e-18!57;UBERON:0001474!6.57e-18!86;UBERON:0007023!1.77e-17!115;UBERON:0002371!2.04e-17!80;UBERON:0004765!4.26e-17!101;UBERON:0001434!4.26e-17!101;UBERON:0001950!7.18e-17!20;UBERON:0002390!2.64e-16!102;UBERON:0003061!2.64e-16!102;UBERON:0002616!1.08e-13!59;UBERON:0003056!3.10e-13!61;UBERON:0002193!6.59e-13!112;UBERON:0000955!1.44e-12!69;UBERON:0006238!1.44e-12!69;UBERON:0003075!1.64e-12!86;UBERON:0007284!1.64e-12!86;UBERON:0002204!2.27e-11!167;UBERON:0001017!2.53e-11!82;UBERON:0002346!3.47e-11!90;UBERON:0005743!1.05e-10!86;UBERON:0000073!2.12e-10!94;UBERON:0001016!2.12e-10!94;UBERON:0002405!1.63e-08!115;UBERON:0001871!4.95e-08!7;UBERON:0000153!5.03e-08!129;UBERON:0007811!5.03e-08!129;UBERON:0000062!1.51e-07!511;UBERON:0000033!1.87e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.18e-29;25!UBERON:0000203;2.18e-29;25!UBERON:0002619;9.28e-28;22!UBERON:0001869;1.75e-26;32!UBERON:0001893;2.49e-24;34!UBERON:0002791;2.65e-24;32!UBERON:0001950;5.87e-24;20!UBERON:0003528;1.27e-21;34!UBERON:0002020;1.27e-21;34!UBERON:0002780;4.36e-15;41!UBERON:0001890;4.36e-15;41!UBERON:0001871;1.39e-13;6!UBERON:0000349;4.55e-11;5!UBERON:0000073;2.70e-09;53!UBERON:0002616;2.70e-09;53!UBERON:0000200;8.71e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0000956;2.18e-29;25!UBERON:0000203;2.18e-29;25!UBERON:0002619;9.28e-28;22!UBERON:0001869;1.75e-26;32!UBERON:0001893;2.49e-24;34!UBERON:0002791;2.65e-24;32!UBERON:0001950;5.87e-24;20!UBERON:0003528;1.27e-21;34!UBERON:0002020;1.27e-21;34!UBERON:0002780;4.36e-15;41!UBERON:0001890;4.36e-15;41!UBERON:0001871;1.39e-13;6!UBERON:0000349;4.55e-11;5!UBERON:0000073;2.70e-09;53!UBERON:0002616;2.70e-09;53!UBERON:0000200;8.71e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.30e-29,25;UBERON:0000203,2.30e-29,25;UBERON:0001869,3.13e-29,32;UBERON:0002619,6.42e-28,22;UBERON:0001893,3.96e-27,34;UBERON:0002791,1.80e-26,32;UBERON:0003528,1.50e-24,34;UBERON:0002020,1.50e-24,34;UBERON:0001950,4.13e-24,20;UBERON:0002780,2.27e-21,41;UBERON:0001890,2.27e-21,41;UBERON:0003080,2.27e-21,41;UBERON:0006240,2.27e-21,41;UBERON:0001474,6.23e-17,82;UBERON:0001049,1.47e-16,56;UBERON:0005068,1.47e-16,56;UBERON:0006241,1.47e-16,56;UBERON:0007135,1.47e-16,56;UBERON:0000073,2.17e-16,53;UBERON:0002616,2.17e-16,53;UBERON:0002371,6.35e-15,76;UBERON:0004765,1.29e-14,90;UBERON:0001871,1.40e-13,6;UBERON:0002390,1.81e-13,98;UBERON:0003061,1.81e-13,98;UBERON:0000955,2.10e-13,68;UBERON:0006238,2.10e-13,68;UBERON:0001434,2.79e-13,100;UBERON:0003056,3.22e-12,61;UBERON:0002193,2.16e-11,108;UBERON:0001017,4.19e-11,81;UBERON:0003075,4.39e-11,82;UBERON:0007284,4.39e-11,82;UBERON:0000349,6.58e-11,5;UBERON:0002405,9.82e-11,93;UBERON:0002346,3.12e-10,86;UBERON:0010371,9.19e-10,104;UBERON:0001016,2.68e-09,89;UBERON:0000200,6.08e-09,6;UBERON:0007023,1.34e-08,114;UBERON:0010314,2.48e-07,132;UBERON:0001872,9.52e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,1.14494394852423,2.05311637609326,0.627713197974014,0,0.0821005894499457,0.0787107813136792,0.393364276848904,1.15148819429164,2.32224184974114,0,0,0,0,0,3.52320527201817,2.76997704265939,2.80762226458198,4.77423915574874,0,0,0,0.872389432677388,0.755751887377619,1.69808842831471,1.85943229524548,1.23350366406548,1.54853185447552,0.28769239232215,0.512321413058201,0,1.03423704220986,0.645484683583826,1.35426486594342,0.564727018627814,1.91034305040492,0.224723484445085,1.22433556948361,0.962787081228281,1.91801137739712,0,0.598390972864896,0,3.77272010217159,4.53908179752912,1.24564449799115,0.251248665256743,1.0429658368404,0.434377689410233,3.63239701580021,2.57794345191295,2.21523671208619,0.422510572623884,0,0.419317291016752,0.112328631146495,0.150176892841506,0.48217676009124,0,0.39783335439818,1.0959849225878,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,1.68152568894461,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.661743720148475,0.443458794925128,0.263504357079378,0.392937226493138,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0.877955241761676,0,0.901428353439581,0,2.51145489964407,0.640672166455702,0,0,0.103052529238439,1.28820270022815,0,0,0,0.757301322732344,0.0920498986422993,0,3.90510551768276,1.0075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,12.5159625863853,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,1.47730203652438,7.02012795417713,1.33768046059855,0,0.16798212819886,0,0,0,0,0.985326475791887,0,1.24396869324463,3.31475892859011,2.39860623510122,0,0,0,0,0.205654985406647,0,0.571652865261156,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.532844358032199,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0.410952645100767,0.895304816199478,0,0,0,0.385029108839245,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.781952530212746,0,0,0,2.37285620900479,0.533637789017222,0,0,0,0,0,0,0,0.511707249066704,0,0,0.616838775210622,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,1.8300481571743,0,0,0,0.103041011647722,2.01452822600355,1.98022799809411,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.689182862422653,0.214840489736547,0.290033387828457,0.681813019328807,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,1.52927441428475,1.70894156152249,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0,0,0,8.23473091569177,0,5.19395104439289,0,0,0,0,0,0,0.403599414382095,61.7477044650973,0,0.921722292925374,0.447352215784832,1.16794399198336,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.593929361665277,0,6.95903353436409,2.11004124615769,0,0,0,0,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0.520874984799877,0.885741385813839,0.844175070377856,0,0.442317039724898,0,0,0,0,1.15425387755696,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,8.10576552799931,0,0,0,0,0,0.796118080530053,0,0,0,0,0.337005664903385,0,0,0,0,0,0,2.41981432097328,1.53036380815245,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,4.49506651286739,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,3.46740707881823,0.600420288709789,0.136905378891993,14.052124687367,0,0,3.35138881526705,1.83328339209347,0,0,0,0,3.15762320687613,0,0,0,0,0,0,0,7.15706720828373,6.40156008724405,0,0,0,0,0,5.10296275927407,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.775697738169303,0.26446520348538,0,0,0.427149650270779,28.7683878332389,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,3.05065662254908,5.88397374320549,1.14681839138014,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,1.51522404220071,0.50313580350515,0,0,0,0,0,0,2.24901556081802,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0.406870733204662,0.181848659202559,0.1074105570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| ||
|short_description=p1@COL24A1 | |short_description=p1@COL24A1 | ||
}} | }} |
Latest revision as of 14:04, 19 September 2015
Short description: | p1@COL24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL24A1_5end |
Coexpression cluster: | C661_acute_lung_Dendritic_placenta_granulocyte_Adipocyte_small |
Association with transcript: | 0bp_to_ENST00000370571, ENST00000426639, ENST00000485434, uc009wcq.2_5end |
EntrezGene: | COL24A1 |
HGNC: | 20821 |
UniProt: | Q17RW2F8WDM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.87e-16 | 48 |
phagocyte | 5.87e-16 | 48 |
myeloid lineage restricted progenitor cell | 2.08e-15 | 66 |
granulocyte monocyte progenitor cell | 2.94e-15 | 67 |
myeloid leukocyte | 1.17e-14 | 72 |
myeloid cell | 8.63e-13 | 108 |
common myeloid progenitor | 8.63e-13 | 108 |
classical monocyte | 1.23e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-12 | 42 |
monopoietic cell | 1.38e-12 | 59 |
monocyte | 1.38e-12 | 59 |
monoblast | 1.38e-12 | 59 |
promonocyte | 1.38e-12 | 59 |
macrophage dendritic cell progenitor | 5.74e-12 | 61 |