FFCP PHASE1:Hg19::chr3:194131791..194131795,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:194131791..194131795,- | |||
|coexpression_cluster_id=C641 | |coexpression_cluster_id=C641 | ||
|description=CAGE_peak_at_chr3:194131791..194131795,- | |description=CAGE_peak_at_chr3:194131791..194131795,- | ||
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|ontology_enrichment_celltype=CL:0002057!1.94e-18!42;CL:0000860!1.98e-18!45;CL:0002009!2.19e-16!65;CL:0002194!8.90e-16!63;CL:0000576!8.90e-16!63;CL:0000040!8.90e-16!63;CL:0000559!8.90e-16!63;CL:0000766!3.88e-15!76;CL:0002087!4.26e-15!119;CL:0000557!5.67e-15!71;CL:0000839!7.80e-15!70;CL:0000738!1.12e-14!140;CL:0002031!6.17e-14!124;CL:0000037!1.91e-13!172;CL:0000566!1.91e-13!172;CL:0002032!3.00e-13!165;CL:0000837!3.00e-13!165;CL:0000763!1.02e-12!112;CL:0000049!1.02e-12!112;CL:0000219!1.50e-12!390;CL:0000988!2.38e-12!182;CL:0000134!3.67e-12!358;CL:0002320!1.21e-10!365;CL:0000048!9.56e-07!430 | |ontology_enrichment_celltype=CL:0002057!1.94e-18!42;CL:0000860!1.98e-18!45;CL:0002009!2.19e-16!65;CL:0002194!8.90e-16!63;CL:0000576!8.90e-16!63;CL:0000040!8.90e-16!63;CL:0000559!8.90e-16!63;CL:0000766!3.88e-15!76;CL:0002087!4.26e-15!119;CL:0000557!5.67e-15!71;CL:0000839!7.80e-15!70;CL:0000738!1.12e-14!140;CL:0002031!6.17e-14!124;CL:0000037!1.91e-13!172;CL:0000566!1.91e-13!172;CL:0002032!3.00e-13!165;CL:0000837!3.00e-13!165;CL:0000763!1.02e-12!112;CL:0000049!1.02e-12!112;CL:0000219!1.50e-12!390;CL:0000988!2.38e-12!182;CL:0000134!3.67e-12!358;CL:0002320!1.21e-10!365;CL:0000048!9.56e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-48;33!CL:0002057;1.15e-48;33!CL:0000473;1.82e-34;39!CL:0000234;1.82e-34;39!CL:0000576;7.17e-25;48!CL:0000766;6.47e-18;69!CL:0000763;3.60e-10;100!CL:0002087;2.75e-09;104!CL:0000738;8.04e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.15e-48;33!CL:0002057;1.15e-48;33!CL:0000473;1.82e-34;39!CL:0000234;1.82e-34;39!CL:0000576;7.17e-25;48!CL:0000766;6.47e-18;69!CL:0000763;3.60e-10;100!CL:0002087;2.75e-09;104!CL:0000738;8.04e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.17e-46,42;CL:0002057,4.17e-46,42;CL:0000473,1.02e-41,48;CL:0000234,1.02e-41,48;CL:0002194,4.08e-35,59;CL:0000576,4.08e-35,59;CL:0000040,4.08e-35,59;CL:0000559,4.08e-35,59;CL:0000839,4.47e-34,66;CL:0000766,8.45e-34,72;CL:0002009,1.36e-33,61;CL:0000557,1.56e-31,67;CL:0002087,1.43e-25,115;CL:0002031,2.28e-25,120;CL:0000763,1.61e-24,108;CL:0000049,1.61e-24,108;CL:0000738,5.91e-24,136;CL:0002032,5.77e-22,161;CL:0000837,5.77e-22,161;CL:0000037,2.66e-21,168;CL:0000988,2.57e-20,177;CL:0000134,1.39e-14,354;CL:0002320,6.71e-14,361;CL:0000219,2.07e-13,386;CL:0000048,1.30e-09,427;CL:0000723,3.34e-09,433;CL:0000034,3.88e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.00e-34;42!CL:0000049;5.10e-08;108 | |ontology_enrichment_development_v019=CL:0002057;6.00e-34;42!CL:0000049;5.10e-08;108 | ||
|ontology_enrichment_disease=DOID:162!5.72e-10!235;DOID:14566!1.59e-09!239;DOID:0050686!9.72e-07!137 | |ontology_enrichment_disease=DOID:162!5.72e-10!235;DOID:14566!1.59e-09!239;DOID:0050686!9.72e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.46e-13!80;UBERON:0001474!9.80e-13!86;UBERON:0002384!5.08e-12!375;UBERON:0002390!3.35e-10!102;UBERON:0003061!3.35e-10!102;UBERON:0004765!2.93e-09!101;UBERON:0001434!2.93e-09!101;UBERON:0002193!4.96e-08!112;UBERON:0002405!1.53e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!8.46e-13!80;UBERON:0001474!9.80e-13!86;UBERON:0002384!5.08e-12!375;UBERON:0002390!3.35e-10!102;UBERON:0003061!3.35e-10!102;UBERON:0004765!2.93e-09!101;UBERON:0001434!2.93e-09!101;UBERON:0002193!4.96e-08!112;UBERON:0002405!1.53e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.65e-28,76;UBERON:0001474,4.07e-28,82;UBERON:0004765,1.59e-24,90;UBERON:0002405,4.23e-22,93;UBERON:0002390,1.63e-21,98;UBERON:0003061,1.63e-21,98;UBERON:0001434,7.34e-21,100;UBERON:0002193,2.04e-18,108;UBERON:0002384,1.22e-13,371;UBERON:0003081,1.68e-11,203;UBERON:0002204,3.07e-09,167;UBERON:0000926,6.25e-07,315;UBERON:0004120,6.25e-07,315;UBERON:0006603,6.25e-07,315 | |||
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| ||
|short_description=p@chr3:194131791..194131795,- | |short_description=p@chr3:194131791..194131795,- | ||
}} | }} |
Latest revision as of 19:37, 29 July 2015
Short description: | p@chr3:194131791..194131795, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:194131791..194131795, - |
Coexpression cluster: | C641_CD14_Neutrophils_Peripheral_Basophils_Whole_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.17e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.17e-46 | 42 |
defensive cell | 1.02e-41 | 48 |
phagocyte | 1.02e-41 | 48 |
monopoietic cell | 4.08e-35 | 59 |
monocyte | 4.08e-35 | 59 |
monoblast | 4.08e-35 | 59 |
promonocyte | 4.08e-35 | 59 |
myeloid lineage restricted progenitor cell | 4.47e-34 | 66 |
myeloid leukocyte | 8.45e-34 | 72 |
macrophage dendritic cell progenitor | 1.36e-33 | 61 |
granulocyte monocyte progenitor cell | 1.56e-31 | 67 |
nongranular leukocyte | 1.43e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.28e-25 | 120 |
myeloid cell | 1.61e-24 | 108 |
common myeloid progenitor | 1.61e-24 | 108 |
leukocyte | 5.91e-24 | 136 |
hematopoietic oligopotent progenitor cell | 5.77e-22 | 161 |
hematopoietic multipotent progenitor cell | 5.77e-22 | 161 |
hematopoietic stem cell | 2.66e-21 | 168 |
hematopoietic cell | 2.57e-20 | 177 |
mesenchymal cell | 1.39e-14 | 354 |
connective tissue cell | 6.71e-14 | 361 |
motile cell | 2.07e-13 | 386 |
multi fate stem cell | 1.30e-09 | 427 |
somatic stem cell | 3.34e-09 | 433 |
stem cell | 3.88e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.65e-28 | 76 |
bone element | 4.07e-28 | 82 |
skeletal element | 1.59e-24 | 90 |
immune system | 4.23e-22 | 93 |
hematopoietic system | 1.63e-21 | 98 |
blood island | 1.63e-21 | 98 |
skeletal system | 7.34e-21 | 100 |
hemolymphoid system | 2.04e-18 | 108 |
connective tissue | 1.22e-13 | 371 |
lateral plate mesoderm | 1.68e-11 | 203 |
musculoskeletal system | 3.07e-09 | 167 |
mesoderm | 6.25e-07 | 315 |
mesoderm-derived structure | 6.25e-07 | 315 |
presumptive mesoderm | 6.25e-07 | 315 |