FFCP PHASE1:Hg19::chr16:55523576..55523615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55523576..55523615,+ | |||
|coexpression_cluster_id=C315 | |coexpression_cluster_id=C315 | ||
|description=CAGE_peak_at_chr16:55523576..55523615,+ | |description=CAGE_peak_at_chr16:55523576..55523615,+ | ||
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|ontology_enrichment_celltype=CL:0000055!2.25e-35!180;CL:0000057!1.37e-18!75;CL:0000680!5.66e-14!57;CL:0000056!5.66e-14!57;CL:0000355!5.66e-14!57;CL:0000183!2.38e-13!59;CL:0000187!1.33e-12!54;CL:0000192!1.52e-11!42;CL:0000514!1.52e-11!42;CL:0000393!3.90e-11!60;CL:0000211!3.90e-11!60;CL:0002371!6.29e-09!591;CL:0002334!7.21e-09!12;CL:0000359!5.04e-08!32;CL:0000048!5.49e-08!430;CL:0000723!1.08e-07!436;CL:0000034!1.70e-07!444;CL:0000222!2.88e-07!119;CL:0000144!6.97e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.25e-35!180;CL:0000057!1.37e-18!75;CL:0000680!5.66e-14!57;CL:0000056!5.66e-14!57;CL:0000355!5.66e-14!57;CL:0000183!2.38e-13!59;CL:0000187!1.33e-12!54;CL:0000192!1.52e-11!42;CL:0000514!1.52e-11!42;CL:0000393!3.90e-11!60;CL:0000211!3.90e-11!60;CL:0002371!6.29e-09!591;CL:0002334!7.21e-09!12;CL:0000359!5.04e-08!32;CL:0000048!5.49e-08!430;CL:0000723!1.08e-07!436;CL:0000034!1.70e-07!444;CL:0000222!2.88e-07!119;CL:0000144!6.97e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.66e-12;12!CL:0000134;1.98e-07;55!CL:0000359;3.27e-07;32!CL:0000723;5.68e-07;61!CL:0002320;6.44e-07;188!CL:0000057;7.82e-07;73!CL:0002494;9.70e-07;16 | |ontology_enrichment_celltype_v019=CL:0002334;4.66e-12;12!CL:0000134;1.98e-07;55!CL:0000359;3.27e-07;32!CL:0000723;5.68e-07;61!CL:0002320;6.44e-07;188!CL:0000057;7.82e-07;73!CL:0002494;9.70e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.63e-18,76;CL:0000048,5.33e-16,427;CL:0000723,2.47e-15,433;CL:0000034,5.44e-15,441;CL:0002334,4.19e-12,12;CL:0002320,4.44e-10,361;CL:0000134,2.00e-09,354;CL:0000680,1.87e-08,58;CL:0000056,1.87e-08,58;CL:0000355,1.87e-08,58;CL:0000136,2.81e-08,15;CL:0000219,8.42e-08,386;CL:0000187,1.68e-07,55;CL:0000192,2.29e-07,43;CL:0000514,2.29e-07,43;CL:0000359,4.28e-07,32;CL:0002494,8.96e-07,16 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.56e-07!14 | |ontology_enrichment_disease=DOID:2394!1.56e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.71e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;5.71e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.50e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.62e-15!84;UBERON:0000914!9.13e-15!83;UBERON:0002329!9.13e-15!83;UBERON:0003077!9.13e-15!83;UBERON:0003059!9.13e-15!83;UBERON:0007282!9.13e-15!83;UBERON:0009618!9.13e-15!83;UBERON:0007285!9.13e-15!83;UBERON:0002385!8.14e-14!63;UBERON:0001015!8.14e-14!63;UBERON:0000383!8.14e-14!63;UBERON:0004290!9.75e-14!70;UBERON:0001134!1.72e-13!61;UBERON:0002036!1.72e-13!61;UBERON:0003082!1.72e-13!61;UBERON:0000486!1.19e-12!82;UBERON:0001981!3.06e-12!60;UBERON:0007500!3.06e-12!60;UBERON:0004537!3.06e-12!60;UBERON:0006965!3.06e-12!60;UBERON:0001637!2.77e-11!42;UBERON:0003509!2.77e-11!42;UBERON:0004572!2.77e-11!42;UBERON:0002049!8.12e-11!79;UBERON:0007798!8.12e-11!79;UBERON:0001009!1.16e-10!113;UBERON:0004535!1.46e-10!110;UBERON:0000055!1.80e-10!69;UBERON:0000490!3.82e-10!138;UBERON:0002199!1.27e-09!45;UBERON:0002416!1.27e-09!45;UBERON:0003914!1.47e-09!118;UBERON:0005256!3.00e-09!143;UBERON:0003102!2.62e-08!95;UBERON:0004573!2.94e-08!33;UBERON:0004571!2.94e-08!33;UBERON:0002097!7.87e-08!40;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000947!1.29e-07!21;UBERON:0010191!1.29e-07!21;UBERON:0007100!1.69e-07!27 | |ontology_enrichment_uberon=UBERON:0004872!1.62e-15!84;UBERON:0000914!9.13e-15!83;UBERON:0002329!9.13e-15!83;UBERON:0003077!9.13e-15!83;UBERON:0003059!9.13e-15!83;UBERON:0007282!9.13e-15!83;UBERON:0009618!9.13e-15!83;UBERON:0007285!9.13e-15!83;UBERON:0002385!8.14e-14!63;UBERON:0001015!8.14e-14!63;UBERON:0000383!8.14e-14!63;UBERON:0004290!9.75e-14!70;UBERON:0001134!1.72e-13!61;UBERON:0002036!1.72e-13!61;UBERON:0003082!1.72e-13!61;UBERON:0000486!1.19e-12!82;UBERON:0001981!3.06e-12!60;UBERON:0007500!3.06e-12!60;UBERON:0004537!3.06e-12!60;UBERON:0006965!3.06e-12!60;UBERON:0001637!2.77e-11!42;UBERON:0003509!2.77e-11!42;UBERON:0004572!2.77e-11!42;UBERON:0002049!8.12e-11!79;UBERON:0007798!8.12e-11!79;UBERON:0001009!1.16e-10!113;UBERON:0004535!1.46e-10!110;UBERON:0000055!1.80e-10!69;UBERON:0000490!3.82e-10!138;UBERON:0002199!1.27e-09!45;UBERON:0002416!1.27e-09!45;UBERON:0003914!1.47e-09!118;UBERON:0005256!3.00e-09!143;UBERON:0003102!2.62e-08!95;UBERON:0004573!2.94e-08!33;UBERON:0004571!2.94e-08!33;UBERON:0002097!7.87e-08!40;UBERON:0000948!1.10e-07!24;UBERON:0005498!1.10e-07!24;UBERON:0004140!1.10e-07!24;UBERON:0009881!1.10e-07!24;UBERON:0004141!1.10e-07!24;UBERON:0003084!1.10e-07!24;UBERON:0007005!1.10e-07!24;UBERON:0004139!1.10e-07!24;UBERON:0004291!1.10e-07!24;UBERON:0000947!1.29e-07!21;UBERON:0010191!1.29e-07!21;UBERON:0007100!1.69e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.36e-10;9!UBERON:0000042;3.36e-10;9!UBERON:0003688;7.65e-09;6!UBERON:0002358;7.65e-09;6!UBERON:0003684;7.65e-09;6!UBERON:0001178;7.65e-09;6!UBERON:0004573;2.02e-08;33!UBERON:0004571;2.02e-08;33!UBERON:0002384;8.45e-08;198!UBERON:0001637;1.41e-07;42!UBERON:0003509;1.41e-07;42!UBERON:0004572;1.41e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0004457;3.36e-10;9!UBERON:0000042;3.36e-10;9!UBERON:0003688;7.65e-09;6!UBERON:0002358;7.65e-09;6!UBERON:0003684;7.65e-09;6!UBERON:0001178;7.65e-09;6!UBERON:0004573;2.02e-08;33!UBERON:0004571;2.02e-08;33!UBERON:0002384;8.45e-08;198!UBERON:0001637;1.41e-07;42!UBERON:0003509;1.41e-07;42!UBERON:0004572;1.41e-07;42 | ||
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| ||
|short_description=p@chr16:55523576..55523615,+ | |short_description=p@chr16:55523576..55523615,+ | ||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55523576..55523615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55523576..55523615, + |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.63e-18 | 76 |
multi fate stem cell | 5.33e-16 | 427 |
somatic stem cell | 2.47e-15 | 433 |
stem cell | 5.44e-15 | 441 |
preadipocyte | 4.19e-12 | 12 |
connective tissue cell | 4.44e-10 | 361 |
mesenchymal cell | 2.00e-09 | 354 |
muscle precursor cell | 1.87e-08 | 58 |
myoblast | 1.87e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.87e-08 | 58 |
fat cell | 2.81e-08 | 15 |
motile cell | 8.42e-08 | 386 |
muscle cell | 1.68e-07 | 55 |
smooth muscle cell | 2.29e-07 | 43 |
smooth muscle myoblast | 2.29e-07 | 43 |
vascular associated smooth muscle cell | 4.28e-07 | 32 |
cardiocyte | 8.96e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.50e-08 | 14 |