FFCP PHASE1:Hg19::chr20:61408204..61408211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:61408204..61408211,- | |||
|coexpression_cluster_id=C217 | |coexpression_cluster_id=C217 | ||
|description=CAGE_peak_at_chr20:61408204..61408211,- | |description=CAGE_peak_at_chr20:61408204..61408211,- | ||
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|ontology_enrichment_celltype=CL:0000860!1.02e-18!45;CL:0002057!1.36e-17!42;CL:0002194!5.87e-12!63;CL:0000576!5.87e-12!63;CL:0000040!5.87e-12!63;CL:0000559!5.87e-12!63;CL:0002087!1.22e-11!119;CL:0002009!2.30e-11!65;CL:0000037!5.58e-11!172;CL:0000566!5.58e-11!172;CL:0000766!1.28e-10!76;CL:0000738!1.52e-10!140;CL:0000988!3.08e-10!182;CL:0000839!4.85e-10!70;CL:0000557!8.44e-10!71;CL:0002031!2.60e-09!124;CL:0002032!2.90e-09!165;CL:0000837!2.90e-09!165;CL:0000763!7.97e-09!112;CL:0000049!7.97e-09!112 | |ontology_enrichment_celltype=CL:0000860!1.02e-18!45;CL:0002057!1.36e-17!42;CL:0002194!5.87e-12!63;CL:0000576!5.87e-12!63;CL:0000040!5.87e-12!63;CL:0000559!5.87e-12!63;CL:0002087!1.22e-11!119;CL:0002009!2.30e-11!65;CL:0000037!5.58e-11!172;CL:0000566!5.58e-11!172;CL:0000766!1.28e-10!76;CL:0000738!1.52e-10!140;CL:0000988!3.08e-10!182;CL:0000839!4.85e-10!70;CL:0000557!8.44e-10!71;CL:0002031!2.60e-09!124;CL:0002032!2.90e-09!165;CL:0000837!2.90e-09!165;CL:0000763!7.97e-09!112;CL:0000049!7.97e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-10;33!CL:0002057;1.89e-10;33!CL:0000473;1.02e-08;39!CL:0000234;1.02e-08;39!CL:0000333;1.17e-07;5 | |ontology_enrichment_celltype_v019=CL:0000860;1.89e-10;33!CL:0002057;1.89e-10;33!CL:0000473;1.02e-08;39!CL:0000234;1.02e-08;39!CL:0000333;1.17e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.35e-09,42;CL:0002057,8.35e-09,42;CL:0000473,1.31e-07,48;CL:0000234,1.31e-07,48;CL:0000763,2.48e-07,108;CL:0000049,2.48e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-07;42 | |ontology_enrichment_development_v019=CL:0002057;3.08e-07;42 | ||
|ontology_enrichment_disease=DOID:171!1.85e-08!10 | |ontology_enrichment_disease=DOID:171!1.85e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:3493;7.10e-18;2!DOID:171;6.46e-14;10!DOID:1036;5.41e-10;8 | |ontology_enrichment_disease_v019=DOID:3493;7.10e-18;2!DOID:171;6.46e-14;10!DOID:1036;5.41e-10;8 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.09e-18,2;DOID:171,7.03e-14,10;DOID:1036,5.10e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0002405!6.88e-11!115;UBERON:0002390!5.24e-10!102;UBERON:0003061!5.24e-10!102;UBERON:0002193!6.08e-09!112;UBERON:0002371!9.92e-09!80;UBERON:0001474!1.23e-07!86 | |ontology_enrichment_uberon=UBERON:0002405!6.88e-11!115;UBERON:0002390!5.24e-10!102;UBERON:0003061!5.24e-10!102;UBERON:0002193!6.08e-09!112;UBERON:0002371!9.92e-09!80;UBERON:0001474!1.23e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.15e-09;4!UBERON:0000923;1.15e-09;4!UBERON:0010316;1.15e-09;4!UBERON:0005291;1.15e-09;4!UBERON:0002050;6.73e-08;5!UBERON:0005423;6.73e-08;5!UBERON:0000013;1.17e-07;5!UBERON:0002410;1.17e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;1.15e-09;4!UBERON:0000923;1.15e-09;4!UBERON:0010316;1.15e-09;4!UBERON:0005291;1.15e-09;4!UBERON:0002050;6.73e-08;5!UBERON:0005423;6.73e-08;5!UBERON:0000013;1.17e-07;5!UBERON:0002410;1.17e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.32e-07,5;UBERON:0002410,1.32e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.200544447470142,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.464858073811369,0,1.85823822537062,0.575384784644301,0.256160706529101,0.47296445977717,1.03423704220986,3.22742341791913,1.35426486594342,0.188242339542605,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,1.00499466102697,0,1.73751075764093,0,1.10483290796269,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.205601498999509,0.334372990781356,0.32592226663359,0.946895611469467,1.94826728407911,0.222820913770347,0,0.443067789167242,0,0.25618263945135,0.780356085359269,0.164437904603676,0.552700035571697,0,0.296573126324121,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0.882926198829301,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,1.8714054040822,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,18.9542998699115,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0.46112780877612,0,0,0.31900115973192,0,0,0,0,0,1.80476528493745,1.56850027454192,5.03464760927528,0.189753732724185,0,0,0.163232808159148,0,0,0,0.619202951523374,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.419636705079985,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,3.51725360827398,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71797825567689,0,0.33946505990805,0.425149840203366,12.0217691331232,1.11728983594649,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,5.45200857514824,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,5.20196238160788,1.95068679971631,0,0,0,0,0,0,0,0,0.219881033490858,0,0.154348316215889,0,0,0,0.235676547101626,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,1.07790242527904,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,0,0.200544447470142,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0.464858073811369,0,1.85823822537062,0.575384784644301,0.256160706529101,0.47296445977717,1.03423704220986,3.22742341791913,1.35426486594342,0.188242339542605,0,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0.56738522469114,0.622822248995575,1.00499466102697,0,1.73751075764093,0,1.10483290796269,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.205601498999509,0.334372990781356,0.32592226663359,0.946895611469467,1.94826728407911,0.222820913770347,0,0.443067789167242,0,0.25618263945135,0.780356085359269,0.164437904603676,0.552700035571697,0,0.296573126324121,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0.882926198829301,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,1.8714054040822,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,18.9542998699115,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0.46112780877612,0,0,0.31900115973192,0,0,0,0,0,1.80476528493745,1.56850027454192,5.03464760927528,0.189753732724185,0,0,0.163232808159148,0,0,0,0.619202951523374,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0.419636705079985,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,3.51725360827398,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71797825567689,0,0.33946505990805,0.425149840203366,12.0217691331232,1.11728983594649,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,5.45200857514824,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,5.20196238160788,1.95068679971631,0,0,0,0,0,0,0,0,0.219881033490858,0,0.154348316215889,0,0,0,0.235676547101626,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,1.07790242527904,0,0,0,0,0,0 | ||
|short_description=p@chr20:61408204..61408211,- | |short_description=p@chr20:61408204..61408211,- | ||
}} | }} |
Latest revision as of 16:12, 28 July 2015
Short description: | p@chr20:61408204..61408211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:61408204..61408211, - |
Coexpression cluster: | C217_carcinoid_neuroectodermal_mature_mesodermal_colon_acute_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.35e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.35e-09 | 42 |
defensive cell | 1.31e-07 | 48 |
phagocyte | 1.31e-07 | 48 |
myeloid cell | 2.48e-07 | 108 |
common myeloid progenitor | 2.48e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.32e-07 | 5 |
autonomic nervous system | 1.32e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.09e-18 | 2 |
neuroectodermal tumor | 7.03e-14 | 10 |
chronic leukemia | 5.10e-10 | 8 |